Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330A06f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z28407-1|CAA82248.1|  257|Homo sapiens ribosomal protein L8 prot...   229   3e-60
CR457046-1|CAG33327.1|  257|Homo sapiens RPL8 protein.                229   3e-60
BT007379-1|AAP36043.1|  257|Homo sapiens ribosomal protein L8 pr...   229   3e-60
BC093064-1|AAH93064.1|  257|Homo sapiens ribosomal protein L8 pr...   229   3e-60
BC013104-1|AAH13104.1|  257|Homo sapiens ribosomal protein L8 pr...   229   3e-60
BC012197-1|AAH12197.1|  257|Homo sapiens ribosomal protein L8 pr...   229   3e-60
BC000077-1|AAH00077.1|  257|Homo sapiens ribosomal protein L8 pr...   229   3e-60
BC000047-1|AAH00047.2|  211|Homo sapiens RPL8 protein protein.        229   3e-60
AB061821-1|BAB79459.1|  257|Homo sapiens ribosomal protein L8 pr...   229   3e-60
AB007168-1|BAA25829.1|  130|Homo sapiens ribosomal protein L8 pr...    40   0.007
AK124779-1|BAC85944.1|  163|Homo sapiens protein ( Homo sapiens ...    30   4.3  

>Z28407-1|CAA82248.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  229 bits (561), Expect = 3e-60
 Identities = 103/127 (81%), Positives = 114/127 (89%)
 Frame = +2

Query: 2   CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 181
           C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 114 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 173

Query: 182 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGR 361
           RIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R   AGR
Sbjct: 174 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGR 233

Query: 362 KVGLIAA 382
           KVGLIAA
Sbjct: 234 KVGLIAA 240


>CR457046-1|CAG33327.1|  257|Homo sapiens RPL8 protein.
          Length = 257

 Score =  229 bits (561), Expect = 3e-60
 Identities = 103/127 (81%), Positives = 114/127 (89%)
 Frame = +2

Query: 2   CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 181
           C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 114 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 173

Query: 182 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGR 361
           RIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R   AGR
Sbjct: 174 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGR 233

Query: 362 KVGLIAA 382
           KVGLIAA
Sbjct: 234 KVGLIAA 240


>BT007379-1|AAP36043.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  229 bits (561), Expect = 3e-60
 Identities = 103/127 (81%), Positives = 114/127 (89%)
 Frame = +2

Query: 2   CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 181
           C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 114 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 173

Query: 182 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGR 361
           RIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R   AGR
Sbjct: 174 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGR 233

Query: 362 KVGLIAA 382
           KVGLIAA
Sbjct: 234 KVGLIAA 240


>BC093064-1|AAH93064.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  229 bits (561), Expect = 3e-60
 Identities = 103/127 (81%), Positives = 114/127 (89%)
 Frame = +2

Query: 2   CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 181
           C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 114 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 173

Query: 182 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGR 361
           RIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R   AGR
Sbjct: 174 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGR 233

Query: 362 KVGLIAA 382
           KVGLIAA
Sbjct: 234 KVGLIAA 240


>BC013104-1|AAH13104.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  229 bits (561), Expect = 3e-60
 Identities = 103/127 (81%), Positives = 114/127 (89%)
 Frame = +2

Query: 2   CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 181
           C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 114 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 173

Query: 182 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGR 361
           RIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R   AGR
Sbjct: 174 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGR 233

Query: 362 KVGLIAA 382
           KVGLIAA
Sbjct: 234 KVGLIAA 240


>BC012197-1|AAH12197.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  229 bits (561), Expect = 3e-60
 Identities = 103/127 (81%), Positives = 114/127 (89%)
 Frame = +2

Query: 2   CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 181
           C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 114 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 173

Query: 182 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGR 361
           RIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R   AGR
Sbjct: 174 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGR 233

Query: 362 KVGLIAA 382
           KVGLIAA
Sbjct: 234 KVGLIAA 240


>BC000077-1|AAH00077.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  229 bits (561), Expect = 3e-60
 Identities = 103/127 (81%), Positives = 114/127 (89%)
 Frame = +2

Query: 2   CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 181
           C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 114 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 173

Query: 182 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGR 361
           RIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R   AGR
Sbjct: 174 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGR 233

Query: 362 KVGLIAA 382
           KVGLIAA
Sbjct: 234 KVGLIAA 240


>BC000047-1|AAH00047.2|  211|Homo sapiens RPL8 protein protein.
          Length = 211

 Score =  229 bits (561), Expect = 3e-60
 Identities = 103/127 (81%), Positives = 114/127 (89%)
 Frame = +2

Query: 2   CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 181
           C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 68  CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 127

Query: 182 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGR 361
           RIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R   AGR
Sbjct: 128 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGR 187

Query: 362 KVGLIAA 382
           KVGLIAA
Sbjct: 188 KVGLIAA 194


>AB061821-1|BAB79459.1|  257|Homo sapiens ribosomal protein L8
           protein.
          Length = 257

 Score =  229 bits (561), Expect = 3e-60
 Identities = 103/127 (81%), Positives = 114/127 (89%)
 Frame = +2

Query: 2   CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 181
           C LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGG
Sbjct: 114 CCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVVGVVAGGG 173

Query: 182 RIDKPILKAGRAYHKYKVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGR 361
           RIDKPILKAGRAYHKYK KRNCWP VRGVAMNPVEHP GGGNHQHIGK ST++R   AGR
Sbjct: 174 RIDKPILKAGRAYHKYKAKRNCWPRVRGVAMNPVEHPFGGGNHQHIGKPSTIRRDAPAGR 233

Query: 362 KVGLIAA 382
           KVGLIAA
Sbjct: 234 KVGLIAA 240


>AB007168-1|BAA25829.1|  130|Homo sapiens ribosomal protein L8
           protein.
          Length = 130

 Score = 39.5 bits (88), Expect = 0.007
 Identities = 17/21 (80%), Positives = 19/21 (90%)
 Frame = +2

Query: 2   CNLEEKMGDRGRLARASGNFA 64
           C LEEK GDRG+LARASGN+A
Sbjct: 110 CCLEEKPGDRGKLARASGNYA 130


>AK124779-1|BAC85944.1|  163|Homo sapiens protein ( Homo sapiens
           cDNA FLJ42789 fis, clone BRAWH3007221. ).
          Length = 163

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
 Frame = -3

Query: 243 LRLTLYLWYAL-PAFKIGLSIRPPPATIPTMPL 148
           L LT +L+ A  P F++ +S+ PPP ++P  P+
Sbjct: 87  LFLTHFLYLAASPCFRLSVSLFPPPLSLPRSPI 119


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,275,785
Number of Sequences: 237096
Number of extensions: 1791917
Number of successful extensions: 4061
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 3938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4060
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)