Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330A05f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   4.4  
DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein ...    21   5.8  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    21   5.8  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    21   5.8  
AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein ...    21   5.8  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           21   5.8  

>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 414 SHDVVKRRPVNCNTTHYRANWVPGP 340
           S +  K++P +C+T  YR   V  P
Sbjct: 560 SDECNKKQPSDCDTLEYRNGEVTTP 584


>DQ855482-1|ABH88169.1|  116|Apis mellifera chemosensory protein 1
           protein.
          Length = 116

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 296 CTILHKLIVDDFHACWLTIPSSLWNSFLEV 207
           CT + K  +D     + T     WN F+E+
Sbjct: 78  CTEIQKQNLDKLAEWFTTNEPEKWNHFVEI 107


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
           protein.
          Length = 484

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 6/10 (60%), Positives = 9/10 (90%)
 Frame = -1

Query: 323 FFFLNSVIYC 294
           F FLN+++YC
Sbjct: 151 FSFLNTIVYC 160


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = +1

Query: 346 RY-PIRPIVSRITIHWPSFYNVVTGXNPXVTQLNRLAAHPPF 468
           RY P R IV  +      +YN  T   P   ++N  +   PF
Sbjct: 274 RYRPARAIVETLANFMRFYYNPFTPFGPVTEKVNNDSNSLPF 315


>AJ973399-1|CAJ01446.1|  116|Apis mellifera hypothetical protein
           protein.
          Length = 116

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 9/30 (30%), Positives = 14/30 (46%)
 Frame = -1

Query: 296 CTILHKLIVDDFHACWLTIPSSLWNSFLEV 207
           CT + K  +D     + T     WN F+E+
Sbjct: 78  CTEIQKQNLDKLAEWFTTNEPEKWNHFVEI 107


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 13/42 (30%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = +1

Query: 346 RY-PIRPIVSRITIHWPSFYNVVTGXNPXVTQLNRLAAHPPF 468
           RY P R IV  +      +YN  T   P   ++N  +   PF
Sbjct: 274 RYRPARAIVETLANFMRFYYNPFTPFGPVTEKVNNDSNSLPF 315


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,065
Number of Sequences: 438
Number of extensions: 2612
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)