Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS330A01f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70750-14|CAC42268.1|  450|Caenorhabditis elegans Hypothetical p...    49   2e-06
U41992-4|AAL02506.2|  876|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z81544-7|CAB04432.2|  551|Caenorhabditis elegans Hypothetical pr...    27   6.2  

>Z70750-14|CAC42268.1|  450|Caenorhabditis elegans Hypothetical
           protein C50F4.16 protein.
          Length = 450

 Score = 48.8 bits (111), Expect = 2e-06
 Identities = 26/90 (28%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
 Frame = -1

Query: 479 CGYNVELSNLEKVLAYRSGVGVQGALQTMFYCEVTDDMKTEQGGG--VDDEIIEVIEKTI 306
           CGY V+  +L  V+ +  G    G+ Q ++Y E+ + MK  +GGG   + E+I  +   +
Sbjct: 125 CGYRVDPDDLIHVITFVVGAHQSGSAQHLYYAEIDESMKISEGGGNVHEGEVITKVYYPV 184

Query: 305 PEVEEMLR----SQDILSSPPSCLFALMWF 228
               E+ R    +   +  PP  LFA  W+
Sbjct: 185 NVAREIARPAIGTHAEVKGPPGVLFAFQWW 214


>U41992-4|AAL02506.2|  876|Caenorhabditis elegans Hypothetical
           protein F32E10.3 protein.
          Length = 876

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/34 (44%), Positives = 24/34 (70%)
 Frame = -1

Query: 347 GVDDEIIEVIEKTIPEVEEMLRSQDILSSPPSCL 246
           GVD+E    ++K I ++EEM++S D L+ PP+ L
Sbjct: 308 GVDEE---KLDKMINKMEEMIKSIDDLTVPPAVL 338


>Z81544-7|CAB04432.2|  551|Caenorhabditis elegans Hypothetical
           protein F49C5.3 protein.
          Length = 551

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 14/53 (26%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = -1

Query: 449 EKVLAYRSGVGVQGALQTMFYCEVTDDMKTEQGG-GVDDEIIEVIEKTIPEVE 294
           +K + +  G G++  ++     E +DD + E+ G G +DE+ E +     E+E
Sbjct: 78  KKKVIFEHGYGIEDDIEDEIDDEESDDEEYEESGNGSEDEVEEEVRVEEQEIE 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,040,152
Number of Sequences: 27780
Number of extensions: 217503
Number of successful extensions: 510
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 510
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)