Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS329H10f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X15657-1|CAA33692.1| 1063|Drosophila melanogaster protein ( Dros... 29 5.1
BT029431-1|ABK57088.1| 1032|Drosophila melanogaster IP16310p pro... 29 5.1
BT011460-1|AAR99118.1| 784|Drosophila melanogaster RE30607p pro... 29 5.1
BT003182-1|AAO24937.1| 698|Drosophila melanogaster RE74590p pro... 29 5.1
AY052066-1|AAK93490.1| 729|Drosophila melanogaster LP11035p pro... 29 5.1
AE013599-2575|AAM68472.2| 729|Drosophila melanogaster CG5058-PG... 29 5.1
AE013599-2573|AAM68468.2| 1032|Drosophila melanogaster CG5058-PB... 29 5.1
AE013599-2572|AAF57782.3| 1063|Drosophila melanogaster CG5058-PA... 29 5.1
AE013599-2571|AAF57784.3| 1302|Drosophila melanogaster CG5058-PC... 29 5.1
AE013599-2570|AAM68467.2| 1333|Drosophila melanogaster CG5058-PD... 29 5.1
>X15657-1|CAA33692.1| 1063|Drosophila melanogaster protein (
Drosophila mRNA forDNA-binding protein Elf1 (Elf1 =
element I-binding activity). ).
Length = 1063
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 178 KLNILFEFIS*NVHSYRFLKNSP---KIDPSESLRDSKGIYHEYCIIKIIYD 324
K+NI + +S + S + +K P +ID E RD+ + YC IK+ D
Sbjct: 750 KINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTAVFHRGYCQIKVFCD 801
>BT029431-1|ABK57088.1| 1032|Drosophila melanogaster IP16310p
protein.
Length = 1032
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 178 KLNILFEFIS*NVHSYRFLKNSP---KIDPSESLRDSKGIYHEYCIIKIIYD 324
K+NI + +S + S + +K P +ID E RD+ + YC IK+ D
Sbjct: 750 KINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTAVFHRGYCQIKVFCD 801
>BT011460-1|AAR99118.1| 784|Drosophila melanogaster RE30607p
protein.
Length = 784
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 178 KLNILFEFIS*NVHSYRFLKNSP---KIDPSESLRDSKGIYHEYCIIKIIYD 324
K+NI + +S + S + +K P +ID E RD+ + YC IK+ D
Sbjct: 471 KINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTAVFHRGYCQIKVFCD 522
>BT003182-1|AAO24937.1| 698|Drosophila melanogaster RE74590p
protein.
Length = 698
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 178 KLNILFEFIS*NVHSYRFLKNSP---KIDPSESLRDSKGIYHEYCIIKIIYD 324
K+NI + +S + S + +K P +ID E RD+ + YC IK+ D
Sbjct: 416 KINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTAVFHRGYCQIKVFCD 467
>AY052066-1|AAK93490.1| 729|Drosophila melanogaster LP11035p
protein.
Length = 729
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 178 KLNILFEFIS*NVHSYRFLKNSP---KIDPSESLRDSKGIYHEYCIIKIIYD 324
K+NI + +S + S + +K P +ID E RD+ + YC IK+ D
Sbjct: 416 KINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTAVFHRGYCQIKVFCD 467
>AE013599-2575|AAM68472.2| 729|Drosophila melanogaster CG5058-PG,
isoform G protein.
Length = 729
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 178 KLNILFEFIS*NVHSYRFLKNSP---KIDPSESLRDSKGIYHEYCIIKIIYD 324
K+NI + +S + S + +K P +ID E RD+ + YC IK+ D
Sbjct: 416 KINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTAVFHRGYCQIKVFCD 467
>AE013599-2573|AAM68468.2| 1032|Drosophila melanogaster CG5058-PB,
isoform B protein.
Length = 1032
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 178 KLNILFEFIS*NVHSYRFLKNSP---KIDPSESLRDSKGIYHEYCIIKIIYD 324
K+NI + +S + S + +K P +ID E RD+ + YC IK+ D
Sbjct: 750 KINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTAVFHRGYCQIKVFCD 801
>AE013599-2572|AAF57782.3| 1063|Drosophila melanogaster CG5058-PA,
isoform A protein.
Length = 1063
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 178 KLNILFEFIS*NVHSYRFLKNSP---KIDPSESLRDSKGIYHEYCIIKIIYD 324
K+NI + +S + S + +K P +ID E RD+ + YC IK+ D
Sbjct: 750 KINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTAVFHRGYCQIKVFCD 801
>AE013599-2571|AAF57784.3| 1302|Drosophila melanogaster CG5058-PC,
isoform C protein.
Length = 1302
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 178 KLNILFEFIS*NVHSYRFLKNSP---KIDPSESLRDSKGIYHEYCIIKIIYD 324
K+NI + +S + S + +K P +ID E RD+ + YC IK+ D
Sbjct: 1020 KINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTAVFHRGYCQIKVFCD 1071
>AE013599-2570|AAM68467.2| 1333|Drosophila melanogaster CG5058-PD,
isoform D protein.
Length = 1333
Score = 28.7 bits (61), Expect = 5.1
Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +1
Query: 178 KLNILFEFIS*NVHSYRFLKNSP---KIDPSESLRDSKGIYHEYCIIKIIYD 324
K+NI + +S + S + +K P +ID E RD+ + YC IK+ D
Sbjct: 1020 KINIAVQCLSTDFSSQKGVKGLPLHVQIDTFEDPRDTAVFHRGYCQIKVFCD 1071
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,395,429
Number of Sequences: 53049
Number of extensions: 359233
Number of successful extensions: 575
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 554
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 570
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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