Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS329H07f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical pr... 37 0.010
Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical pr... 37 0.010
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 36 0.013
Z81044-6|CAB02806.1| 360|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z81547-1|CAB04459.1| 354|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z46794-10|CAH04745.1| 417|Caenorhabditis elegans Hypothetical p... 28 3.5
Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical pr... 28 4.7
U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2 prot... 28 4.7
AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like nucl... 28 4.7
AF078157-2|AAN84818.1| 176|Caenorhabditis elegans Hypothetical ... 28 4.7
AF078157-1|AAG24071.1| 235|Caenorhabditis elegans Hypothetical ... 28 4.7
AF024492-6|AAF98616.1| 277|Caenorhabditis elegans Hypothetical ... 28 4.7
AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical ... 28 4.7
AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical ... 28 4.7
Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical pr... 27 6.2
Z72504-1|CAA96603.2| 1193|Caenorhabditis elegans Hypothetical pr... 27 6.2
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 27 6.2
EF535106-1|ABQ15208.1| 1206|Caenorhabditis elegans transient rec... 27 6.2
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 27 6.2
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 27 6.2
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 27 6.2
AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical ... 27 6.2
U80446-6|AAB37805.2| 783|Caenorhabditis elegans Hypothetical pr... 27 8.1
U42843-3|AAM75365.1| 310|Caenorhabditis elegans Skinhead protei... 27 8.1
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 23 8.7
>Z78543-5|CAH10796.1| 1453|Caenorhabditis elegans Hypothetical
protein F29G6.3c protein.
Length = 1453
Score = 36.7 bits (81), Expect = 0.010
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 11/94 (11%)
Frame = +2
Query: 119 ESGHHHQ-----IEHEHAKSHQSIKFEHFHP-VPVYVKKEHSHLLKH---PLEKGKSEQN 271
ES HHH +E E KS + H+ P P VK + + +H PLEK +
Sbjct: 696 ESFHHHSFIPNSLEAER-KSRSVERAHHYLPDSPANVKDQRKIIREHHYVPLEKRSQSLD 754
Query: 272 LKLIHPETEHKHGGGLVLEDDRH--NIEHHIASA 367
LK++HPE + ED + N EHH A
Sbjct: 755 LKVVHPEHHYVPLVRKTTEDHQQKVNHEHHFIPA 788
>Z78543-4|CAB01754.1| 1785|Caenorhabditis elegans Hypothetical
protein F29G6.3b protein.
Length = 1785
Score = 36.7 bits (81), Expect = 0.010
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 11/94 (11%)
Frame = +2
Query: 119 ESGHHHQ-----IEHEHAKSHQSIKFEHFHP-VPVYVKKEHSHLLKH---PLEKGKSEQN 271
ES HHH +E E KS + H+ P P VK + + +H PLEK +
Sbjct: 696 ESFHHHSFIPNSLEAER-KSRSVERAHHYLPDSPANVKDQRKIIREHHYVPLEKRSQSLD 754
Query: 272 LKLIHPETEHKHGGGLVLEDDRH--NIEHHIASA 367
LK++HPE + ED + N EHH A
Sbjct: 755 LKVVHPEHHYVPLVRKTTEDHQQKVNHEHHFIPA 788
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 36.3 bits (80), Expect = 0.013
Identities = 26/91 (28%), Positives = 34/91 (37%), Gaps = 2/91 (2%)
Frame = +2
Query: 116 GESGHH--HQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHP 289
G GHH H + H H +SH H H P + H H +H + G H
Sbjct: 575 GHHGHHGSHGVHHGHHESHG-----HGHHAPAH----HGHHGEHGVHHGHHGAGYGAHHG 625
Query: 290 ETEHKHGGGLVLEDDRHNIEHHIASAGLEHG 382
H E H+ +HH S G+ HG
Sbjct: 626 HHGAHHHHAPHHEHHEHHGDHHHGSHGVHHG 656
Score = 33.5 bits (73), Expect = 0.094
Identities = 28/109 (25%), Positives = 34/109 (31%), Gaps = 3/109 (2%)
Frame = +2
Query: 65 HDEAPQVEAKY-DHQSLIGESGHH--HQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLL 235
H AP + +H GHH H H H SH S H + H H
Sbjct: 461 HHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHHGHHGEHHHAPAHHGHHG 520
Query: 236 KHPLEKGKSEQNLKLIHPETEHKHGGGLVLEDDRHNIEHHIASAGLEHG 382
+H G ++ H H H G H H A G HG
Sbjct: 521 EHGTHHGHHGEH---HHAPAHHGHHGEHGTHHGHHGSHHSPAHHG-HHG 565
Score = 31.5 bits (68), Expect = 0.38
Identities = 32/113 (28%), Positives = 40/113 (35%), Gaps = 6/113 (5%)
Frame = +2
Query: 65 HDEAPQVEAKYDHQSLIGESGHH------HQIEHEHAKSHQSIKFEHFHPVPVYVKKEHS 226
H E A + H G GHH H EH HA +H EH H P + H
Sbjct: 429 HGEHHHAPAHHGHHESHGH-GHHSPAHHGHHGEHHHAPAHHGHHGEHHH-APAH----HG 482
Query: 227 HLLKHPLEKGKSEQNLKLIHPETEHKHGGGLVLEDDRHNIEHHIASAGLEHGS 385
H +H G + H H H G + H+ H G EHG+
Sbjct: 483 HHGEHGTHHGHHGSH----HSPAHHGHHG------EHHHAPAHHGHHG-EHGT 524
Score = 30.3 bits (65), Expect = 0.87
Identities = 30/107 (28%), Positives = 38/107 (35%), Gaps = 2/107 (1%)
Frame = +2
Query: 65 HDEAPQVEAKYDHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLLKHP 244
H E + E ++H + E G HH+ EH +H S H EH H P
Sbjct: 381 HHEHKEGE-HHEHAAHHDEHGVHHRHHGEHHGTHHSPAHHGEHGTHHGHHGEHHHA---P 436
Query: 245 LEKGKSEQNLKLIHPETEHKHGG--GLVLEDDRHNIEHHIASAGLEH 379
G E + H H H G H+ EHH A A H
Sbjct: 437 AHHGHHESHGHGHHSPAHHGHHGEHHHAPAHHGHHGEHHHAPAHHGH 483
Score = 30.3 bits (65), Expect = 0.87
Identities = 26/91 (28%), Positives = 31/91 (34%), Gaps = 2/91 (2%)
Frame = +2
Query: 116 GESG-HH-HQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHP 289
GE G HH H EH HA +H H H + H H +H + + H
Sbjct: 420 GEHGTHHGHHGEHHHAPAHHGHHESHGH--GHHSPAHHGHHGEHHHAPAHHGHHGEHHHA 477
Query: 290 ETEHKHGGGLVLEDDRHNIEHHIASAGLEHG 382
H H G H H A G HG
Sbjct: 478 PAHHGHHGEHGTHHGHHGSHHSPAHHG-HHG 507
Score = 30.3 bits (65), Expect = 0.87
Identities = 24/93 (25%), Positives = 28/93 (30%)
Frame = +2
Query: 101 HQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKL 280
H GE G HH +H H H P + EH H H G +
Sbjct: 602 HHGHHGEHGVHHGHHGAGYGAHHGHHGAHHHHAPHHEHHEH-HGDHHHGSHGVHHGHHGT 660
Query: 281 IHPETEHKHGGGLVLEDDRHNIEHHIASAGLEH 379
H H H GG H+ H G H
Sbjct: 661 HHSLAHHGHHGGHGTHHGAHHSPAHHGHHGAHH 693
Score = 29.5 bits (63), Expect = 1.5
Identities = 23/85 (27%), Positives = 27/85 (31%), Gaps = 9/85 (10%)
Frame = +2
Query: 128 HHHQIEHEHAK-----SHQSIKFEHFHPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHPE 292
HHH HEH + H S H H + H H H G H
Sbjct: 631 HHHAPHHEHHEHHGDHHHGSHGVHHGHHGTHHSLAHHGHHGGHGTHHGAHHSPAHHGHHG 690
Query: 293 TEHKHGGGLVL----EDDRHNIEHH 355
H+HG DD+ N HH
Sbjct: 691 AHHEHGAHHGAHHGHHDDKENHHHH 715
Score = 28.3 bits (60), Expect = 3.5
Identities = 30/110 (27%), Positives = 35/110 (31%), Gaps = 4/110 (3%)
Frame = +2
Query: 65 HDEAPQVEAKYDHQSLIGESG-HH-HQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLLK 238
H E A + H GE G HH H EH HA +H EH H H
Sbjct: 506 HGEHHHAPAHHGHH---GEHGTHHGHHGEHHHAPAHHGHHGEH--------GTHHGHHGS 554
Query: 239 H--PLEKGKSEQNLKLIHPETEHKHGGGLVLEDDRHNIEHHIASAGLEHG 382
H P G ++ H H G + H H A HG
Sbjct: 555 HHSPAHHGHHGEHHHAPAHHGHHGHHGSHGVHHGHHESHGHGHHAPAHHG 604
>Z81044-6|CAB02806.1| 360|Caenorhabditis elegans Hypothetical
protein C30H6.2 protein.
Length = 360
Score = 31.1 bits (67), Expect = 0.50
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +2
Query: 14 HIFLGLIAAVTAFPGIIHDEAPQVEAKYDHQSLIGESGHHHQIEHEHAKSHQSIK 178
H FL + + + I+H PQV +DH GH+H HEH H ++
Sbjct: 46 HFFLAMAVSTLSSDAILHI-IPQVVGVHDH-------GHNHGHSHEHHHEHTDLE 92
>Z68105-3|CAA92121.2| 442|Caenorhabditis elegans Hypothetical
protein F13E6.4 protein.
Length = 442
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Frame = +2
Query: 131 HHQIEHEHAKSHQSIKFE-HFHPVPVYVKK-------EHSHLLKHPLEKGKSEQN 271
HH + H+H+KS ++ + PVP +VK ++ L + P ++G +QN
Sbjct: 126 HHNVHHQHSKSVSALPMTIGYSPVPSHVKSVSHEANYSYAGLSEIPQQQGMMQQN 180
>Z81547-1|CAB04459.1| 354|Caenorhabditis elegans Hypothetical
protein F53F8.1 protein.
Length = 354
Score = 28.7 bits (61), Expect = 2.7
Identities = 16/51 (31%), Positives = 20/51 (39%)
Frame = +2
Query: 77 PQVEAKYDHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSH 229
P Y HQS + H H +H H +SH PV + V H H
Sbjct: 62 PSSSNGYYHQSQYQNAHHQHHQQHYHQQSHHHYNGAAAAPV-INVHNYHFH 111
>Z46794-10|CAH04745.1| 417|Caenorhabditis elegans Hypothetical
protein R06F6.12 protein.
Length = 417
Score = 28.3 bits (60), Expect = 3.5
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 71 EAPQVEAKYDHQSLIGESGHHHQIEHE 151
+A Q E +++ + +I + HHH + HE
Sbjct: 122 QAKQNEQEHNEEVVIEDGSHHHMVHHE 148
>Z77655-6|CAB01139.1| 351|Caenorhabditis elegans Hypothetical
protein C56A3.7 protein.
Length = 351
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 119 ESGHHHQIEHEHAKSHQSI 175
E HHH HEH HQ I
Sbjct: 36 EDHHHHHHHHEHHHQHQGI 54
>U75587-1|AAB48299.1| 351|Caenorhabditis elegans caveolin-2
protein.
Length = 351
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 119 ESGHHHQIEHEHAKSHQSI 175
E HHH HEH HQ I
Sbjct: 36 EDHHHHHHHHEHHHQHQGI 54
>AF162674-1|AAF80462.1| 575|Caenorhabditis elegans CNT-like
nucleoside transporter protein.
Length = 575
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -2
Query: 187 VFELDRLVRFGVFVFNLMMVSRFTNQRLVVVFRFDLGSFIMYY 59
+ +L RL F +VF ++ + F+N R+ + + + IM+Y
Sbjct: 141 IHDLTRLTGFFAYVFYILFMFVFSNNRMKINWSVVSSALIMHY 183
>AF078157-2|AAN84818.1| 176|Caenorhabditis elegans Hypothetical
protein F25E5.8b protein.
Length = 176
Score = 27.9 bits (59), Expect = 4.7
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
Frame = +2
Query: 14 HIFLGLIAAVTAFPGIIHDEAPQVEAKYDHQSLIGESGHHHQIEHEHAKSH-QSIKF-EH 187
H+ L++ + F +A + ++ S G SG H EH H + H S+ F +H
Sbjct: 5 HVIAELVSEFSGFQHTPDFKASRSTGNFEEGSEEGTSGSHKPEEHHHKEHHGHSLYFGKH 64
Query: 188 F---HPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHPETEHKHGGGLVLEDDRHNIEHH 355
H PV +H H G S +LK E KH G D +I HH
Sbjct: 65 SGKKHLPPVVENDGDTH-SNHSDVSG-SGSSLK------EKKHHGLTAHFKDLFHIGHH 115
>AF078157-1|AAG24071.1| 235|Caenorhabditis elegans Hypothetical
protein F25E5.8a protein.
Length = 235
Score = 27.9 bits (59), Expect = 4.7
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 5/119 (4%)
Frame = +2
Query: 14 HIFLGLIAAVTAFPGIIHDEAPQVEAKYDHQSLIGESGHHHQIEHEHAKSH-QSIKF-EH 187
H+ L++ + F +A + ++ S G SG H EH H + H S+ F +H
Sbjct: 5 HVIAELVSEFSGFQHTPDFKASRSTGNFEEGSEEGTSGSHKPEEHHHKEHHGHSLYFGKH 64
Query: 188 F---HPVPVYVKKEHSHLLKHPLEKGKSEQNLKLIHPETEHKHGGGLVLEDDRHNIEHH 355
H PV +H H G S +LK E KH G D +I HH
Sbjct: 65 SGKKHLPPVVENDGDTH-SNHSDVSG-SGSSLK------EKKHHGLTAHFKDLFHIGHH 115
>AF024492-6|AAF98616.1| 277|Caenorhabditis elegans Hypothetical
protein F14F9.2 protein.
Length = 277
Score = 27.9 bits (59), Expect = 4.7
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 9/69 (13%)
Frame = +2
Query: 62 IHDEAPQV--EAKYDHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPV-------PVYVK 214
I EAP + EA + + E+ H E EH+ SH++ +H+ P PV ++
Sbjct: 198 IGSEAPFIGSEAPVESNTESEENSHEDSDEPEHSDSHEN---DHYSPPEIDSSDDPVLIR 254
Query: 215 KEHSHLLKH 241
K H KH
Sbjct: 255 KGHGKRGKH 263
>AF016413-4|AAM29683.1| 454|Caenorhabditis elegans Hypothetical
protein F27E11.2b protein.
Length = 454
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -2
Query: 187 VFELDRLVRFGVFVFNLMMVSRFTNQRLVVVFRFDLGSFIMYY 59
+ +L RL F +VF ++ + F+N R+ + + + IM+Y
Sbjct: 141 IHDLTRLTGFFAYVFYILFMFVFSNNRMKINWSVVSSALIMHY 183
>AF016413-3|AAB65256.3| 555|Caenorhabditis elegans Hypothetical
protein F27E11.2a protein.
Length = 555
Score = 27.9 bits (59), Expect = 4.7
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -2
Query: 187 VFELDRLVRFGVFVFNLMMVSRFTNQRLVVVFRFDLGSFIMYY 59
+ +L RL F +VF ++ + F+N R+ + + + IM+Y
Sbjct: 141 IHDLTRLTGFFAYVFYILFMFVFSNNRMKINWSVVSSALIMHY 183
>Z81077-9|CAD56582.1| 565|Caenorhabditis elegans Hypothetical
protein F36A2.9b protein.
Length = 565
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 98 DHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPV 199
D S I E ++H+H KS +IK E PV
Sbjct: 81 DDSSDISEERERDSVDHQHLKSLTAIKPEKHQPV 114
>Z81077-8|CAB03072.2| 528|Caenorhabditis elegans Hypothetical
protein F36A2.9a protein.
Length = 528
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 98 DHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPV 199
D S I E ++H+H KS +IK E PV
Sbjct: 81 DDSSDISEERERDSVDHQHLKSLTAIKPEKHQPV 114
>Z72504-1|CAA96603.2| 1193|Caenorhabditis elegans Hypothetical
protein C29E6.2 protein.
Length = 1193
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 188 FHPVPVYVKKEHSHLLKHPLEK 253
+HP+ + E HLL HPL K
Sbjct: 760 YHPLKLMADAEKLHLLNHPLSK 781
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 27.5 bits (58), Expect = 6.2
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = +2
Query: 83 VEAKYDHQSLIGESGHHHQIEHEHAKSHQSIKFEH 187
V+ + HQ E H HQ EH + HQ+ EH
Sbjct: 162 VDEHHGHQKKNAEDHHEHQKRSEHVE-HQAEMHEH 195
>EF535106-1|ABQ15208.1| 1206|Caenorhabditis elegans transient
receptor potential subfamilyA-1 protein.
Length = 1206
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 188 FHPVPVYVKKEHSHLLKHPLEK 253
+HP+ + E HLL HPL K
Sbjct: 773 YHPLKLMADAEKLHLLNHPLSK 794
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform a
protein.
Length = 4488
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/44 (20%), Positives = 21/44 (47%)
Frame = +2
Query: 104 QSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLL 235
Q L HQ + + + Q +F HF+ +++++H + +
Sbjct: 196 QQLYQHQHQQHQQQQQQPQEQQQQRFHHFNQYQQHIREQHQNTM 239
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform d
protein.
Length = 4369
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/44 (20%), Positives = 21/44 (47%)
Frame = +2
Query: 104 QSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLL 235
Q L HQ + + + Q +F HF+ +++++H + +
Sbjct: 196 QQLYQHQHQQHQQQQQQPQEQQQQRFHHFNQYQQHIREQHQNTM 239
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin
(drosophila actin-binding)homolog protein 1, isoform c
protein.
Length = 4447
Score = 27.5 bits (58), Expect = 6.2
Identities = 9/44 (20%), Positives = 21/44 (47%)
Frame = +2
Query: 104 QSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLL 235
Q L HQ + + + Q +F HF+ +++++H + +
Sbjct: 196 QQLYQHQHQQHQQQQQQPQEQQQQRFHHFNQYQQHIREQHQNTM 239
>AF099916-2|AAC68776.1| 1145|Caenorhabditis elegans Hypothetical
protein F54C4.3 protein.
Length = 1145
Score = 27.5 bits (58), Expect = 6.2
Identities = 19/79 (24%), Positives = 30/79 (37%)
Frame = +2
Query: 71 EAPQVEAKYDHQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVYVKKEHSHLLKHPLE 250
E P E Y+ E G H+ +E EH K H +++ E ++H H + P
Sbjct: 810 ELPDEEVIYETYEDYPEYGGHYDLEEEH-KMHHNMRLEEEE------LQQHLHEQQKPEH 862
Query: 251 KGKSEQNLKLIHPETEHKH 307
+ L + H H
Sbjct: 863 LSHQTEELGELQDHHHHHH 881
>U80446-6|AAB37805.2| 783|Caenorhabditis elegans Hypothetical
protein F56A3.1 protein.
Length = 783
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -2
Query: 391 FKASVLKTSRSNMVFNVVSVVLEDKSTAVLVFSLWVNQLE 272
F+ SVL TS SN S+ + L S W+ Q E
Sbjct: 272 FRCSVLTTSTSNASRRTASITKRQQMITNLQLSDWIEQTE 311
>U42843-3|AAM75365.1| 310|Caenorhabditis elegans Skinhead protein
1, isoform b protein.
Length = 310
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +2
Query: 101 HQSLIGESGHHHQIEHEHAKSHQSIKFEHFHPVPVY 208
+Q + + GHHHQ H +A S S F+ P Y
Sbjct: 50 NQQQVDQHGHHHQ--HPYAYSGVSSTFDRVFPTSNY 83
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical
protein B0285.1 protein.
Length = 730
Score = 23.0 bits (47), Expect(2) = 8.7
Identities = 7/13 (53%), Positives = 7/13 (53%)
Frame = +2
Query: 116 GESGHHHQIEHEH 154
G S HHH H H
Sbjct: 673 GSSNHHHHHHHSH 685
Score = 22.2 bits (45), Expect(2) = 8.7
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +2
Query: 128 HHHQIEHEHAKS 163
HHH H HA S
Sbjct: 679 HHHHHSHHHASS 690
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,833,557
Number of Sequences: 27780
Number of extensions: 238367
Number of successful extensions: 900
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 811
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 884
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -