Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329H02f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ138692-1|ABA86298.1|  169|Drosophila melanogaster CG5012 protein.   122   4e-28
AY075505-1|AAL68314.1|  182|Drosophila melanogaster RE53508p pro...   122   4e-28
AY060871-1|AAL28419.1|  182|Drosophila melanogaster GM03767p pro...   122   4e-28
AE014296-1546|AAF50348.1|  182|Drosophila melanogaster CG5012-PA...   122   4e-28
AY061107-1|AAL28655.1|  595|Drosophila melanogaster LD09531p pro...    34   0.13 
AF219009-1|AAF27644.1|  595|Drosophila melanogaster multi-sex-co...    34   0.13 
AE014298-1312|AAF46473.1|  595|Drosophila melanogaster CG12058-P...    34   0.13 
AE014134-3185|AAF53863.1|  470|Drosophila melanogaster CG13966-P...    30   2.2  
AY061272-1|AAL28820.1|  707|Drosophila melanogaster LD19634p pro...    29   5.1  
AE014296-2322|AAF49789.1|  952|Drosophila melanogaster CG8833-PA...    29   5.1  
AE013599-3382|AAS64756.1| 1013|Drosophila melanogaster CG11206-P...    28   8.8  
AE013599-3381|AAF46835.1| 1013|Drosophila melanogaster CG11206-P...    28   8.8  

>DQ138692-1|ABA86298.1|  169|Drosophila melanogaster CG5012 protein.
          Length = 169

 Score =  122 bits (293), Expect = 4e-28
 Identities = 67/125 (53%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
 Frame = +1

Query: 148 LTIPVPEGVDKPVSPKIEKIVFEITNLNLLEVSELSQVLKKRLNLPDXXXXXXXXXXXXX 327
           L  P PEG  KP +PK++ IV  I  LNLLEV+ELS +LK++LNLP+             
Sbjct: 29  LVPPAPEGAAKPPNPKLDSIVNNIAALNLLEVAELSTLLKQKLNLPETAFAPQFAAGPAR 88

Query: 328 XXXXXXXXXXXXXXX-TSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTV 504
                           TSF VK+ KFD+KQKVALIKEVK LLEG NLVQAKKFVES PT+
Sbjct: 89  AAPAEDEEEAAPKKVQTSFKVKLVKFDEKQKVALIKEVKNLLEGMNLVQAKKFVESAPTI 148

Query: 505 VKADI 519
           VK DI
Sbjct: 149 VKEDI 153


>AY075505-1|AAL68314.1|  182|Drosophila melanogaster RE53508p
           protein.
          Length = 182

 Score =  122 bits (293), Expect = 4e-28
 Identities = 67/125 (53%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
 Frame = +1

Query: 148 LTIPVPEGVDKPVSPKIEKIVFEITNLNLLEVSELSQVLKKRLNLPDXXXXXXXXXXXXX 327
           L  P PEG  KP +PK++ IV  I  LNLLEV+ELS +LK++LNLP+             
Sbjct: 36  LVPPAPEGAAKPPNPKLDSIVNNIAALNLLEVAELSTLLKQKLNLPETAFAPQFAAGPAR 95

Query: 328 XXXXXXXXXXXXXXX-TSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTV 504
                           TSF VK+ KFD+KQKVALIKEVK LLEG NLVQAKKFVES PT+
Sbjct: 96  AAPAEDEEEAAPKKVQTSFKVKLVKFDEKQKVALIKEVKNLLEGMNLVQAKKFVESAPTI 155

Query: 505 VKADI 519
           VK DI
Sbjct: 156 VKEDI 160


>AY060871-1|AAL28419.1|  182|Drosophila melanogaster GM03767p
           protein.
          Length = 182

 Score =  122 bits (293), Expect = 4e-28
 Identities = 67/125 (53%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
 Frame = +1

Query: 148 LTIPVPEGVDKPVSPKIEKIVFEITNLNLLEVSELSQVLKKRLNLPDXXXXXXXXXXXXX 327
           L  P PEG  KP +PK++ IV  I  LNLLEV+ELS +LK++LNLP+             
Sbjct: 36  LVPPAPEGAAKPPNPKLDSIVNNIAALNLLEVAELSTLLKQKLNLPETAFAPQFAAGPAR 95

Query: 328 XXXXXXXXXXXXXXX-TSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTV 504
                           TSF VK+ KFD+KQKVALIKEVK LLEG NLVQAKKFVES PT+
Sbjct: 96  AAPAEDEEEAAPKKVQTSFKVKLVKFDEKQKVALIKEVKNLLEGMNLVQAKKFVESAPTI 155

Query: 505 VKADI 519
           VK DI
Sbjct: 156 VKEDI 160


>AE014296-1546|AAF50348.1|  182|Drosophila melanogaster CG5012-PA
           protein.
          Length = 182

 Score =  122 bits (293), Expect = 4e-28
 Identities = 67/125 (53%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
 Frame = +1

Query: 148 LTIPVPEGVDKPVSPKIEKIVFEITNLNLLEVSELSQVLKKRLNLPDXXXXXXXXXXXXX 327
           L  P PEG  KP +PK++ IV  I  LNLLEV+ELS +LK++LNLP+             
Sbjct: 36  LVPPAPEGAAKPPNPKLDSIVNNIAALNLLEVAELSTLLKQKLNLPETAFAPQFAAGPAR 95

Query: 328 XXXXXXXXXXXXXXX-TSFTVKMTKFDDKQKVALIKEVKGLLEGFNLVQAKKFVESVPTV 504
                           TSF VK+ KFD+KQKVALIKEVK LLEG NLVQAKKFVES PT+
Sbjct: 96  AAPAEDEEEAAPKKVQTSFKVKLVKFDEKQKVALIKEVKNLLEGMNLVQAKKFVESAPTI 155

Query: 505 VKADI 519
           VK DI
Sbjct: 156 VKEDI 160


>AY061107-1|AAL28655.1|  595|Drosophila melanogaster LD09531p
           protein.
          Length = 595

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = +1

Query: 31  KNKTRNMNGIRIIKNVNLQWRSLSRCSVLRQEVTQT-VTPLTIPVPEGVDKPVSPKIEKI 207
           K K    N IR          +LS+   LR+ V Q    PL I +     K ++  +++I
Sbjct: 54  KRKRHLFNSIRGQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNKIKTLTQDVQQI 113

Query: 208 VFEITNLNLLEVSELSQVLKKRLNLPD 288
              ++N  LLE+ E    +K+R  LPD
Sbjct: 114 AKALSNSQLLELDETELKVKRRTKLPD 140


>AF219009-1|AAF27644.1|  595|Drosophila melanogaster multi-sex-combs
           protein.
          Length = 595

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = +1

Query: 31  KNKTRNMNGIRIIKNVNLQWRSLSRCSVLRQEVTQT-VTPLTIPVPEGVDKPVSPKIEKI 207
           K K    N IR          +LS+   LR+ V Q    PL I +     K ++  +++I
Sbjct: 54  KRKRHLFNSIRGQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNKIKTLTQDVQQI 113

Query: 208 VFEITNLNLLEVSELSQVLKKRLNLPD 288
              ++N  LLE+ E    +K+R  LPD
Sbjct: 114 AKALSNSQLLELDETELKVKRRTKLPD 140


>AE014298-1312|AAF46473.1|  595|Drosophila melanogaster CG12058-PA
           protein.
          Length = 595

 Score = 33.9 bits (74), Expect = 0.13
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
 Frame = +1

Query: 31  KNKTRNMNGIRIIKNVNLQWRSLSRCSVLRQEVTQT-VTPLTIPVPEGVDKPVSPKIEKI 207
           K K    N IR          +LS+   LR+ V Q    PL I +     K ++  +++I
Sbjct: 54  KRKRHLFNSIRGQMEFYFGDANLSKDRFLRRYVEQDPYVPLEIFLTFNKIKTLTQDVQQI 113

Query: 208 VFEITNLNLLEVSELSQVLKKRLNLPD 288
              ++N  LLE+ E    +K+R  LPD
Sbjct: 114 AKALSNSQLLELDETELKVKRRTKLPD 140


>AE014134-3185|AAF53863.1|  470|Drosophila melanogaster CG13966-PA
           protein.
          Length = 470

 Score = 29.9 bits (64), Expect = 2.2
 Identities = 18/60 (30%), Positives = 27/60 (45%)
 Frame = +1

Query: 100 SRCSVLRQEVTQTVTPLTIPVPEGVDKPVSPKIEKIVFEITNLNLLEVSELSQVLKKRLN 279
           S C+ L  +V Q   P   P  +GV  P + K +   +    LN   V++   V  KR+N
Sbjct: 370 SPCTTLSVKVPQLQPPSPTPSTQGVQDPPNGKTQVTNYNRVMLNHRSVTKPKDVKYKRIN 429


>AY061272-1|AAL28820.1|  707|Drosophila melanogaster LD19634p
           protein.
          Length = 707

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
 Frame = +1

Query: 142 TPLTIPVPEGVDKPVSPKIE--KIVFEITNLNLLEVSELSQ--VLKKRLNLP 285
           TPL   V E  +KP+S K++  K +FE ++    E+SE  +  +L++   LP
Sbjct: 453 TPLEQAVDESRNKPISEKVDLFKSIFEDSDEEETELSEQDKLAILQESFGLP 504


>AE014296-2322|AAF49789.1|  952|Drosophila melanogaster CG8833-PA
           protein.
          Length = 952

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
 Frame = +1

Query: 142 TPLTIPVPEGVDKPVSPKIE--KIVFEITNLNLLEVSELSQ--VLKKRLNLP 285
           TPL   V E  +KP+S K++  K +FE ++    E+SE  +  +L++   LP
Sbjct: 698 TPLEQAVDESRNKPISEKVDLFKSIFEDSDEEETELSEQDKLAILQESFGLP 749


>AE013599-3382|AAS64756.1| 1013|Drosophila melanogaster CG11206-PB,
           isoform B protein.
          Length = 1013

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 160 VPEGVDKPVSPKIEKIVFEITNLNLLEVSELSQVLKKRLNLPD 288
           +PE V K V PK+  +     NLN   ++    V K+  NL +
Sbjct: 60  IPEKVKKSVDPKVVAVELGFRNLNAENLTGSGGVDKRNANLSE 102


>AE013599-3381|AAF46835.1| 1013|Drosophila melanogaster CG11206-PA,
           isoform A protein.
          Length = 1013

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = +1

Query: 160 VPEGVDKPVSPKIEKIVFEITNLNLLEVSELSQVLKKRLNLPD 288
           +PE V K V PK+  +     NLN   ++    V K+  NL +
Sbjct: 60  IPEKVKKSVDPKVVAVELGFRNLNAENLTGSGGVDKRNANLSE 102


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.317    0.134    0.362 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,186,888
Number of Sequences: 53049
Number of extensions: 340734
Number of successful extensions: 1280
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1280
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)