Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS329G09f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067944-6|AAC17671.1| 269|Caenorhabditis elegans Hypothetical ... 31 0.66
U80452-2|AAK68180.1| 729|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z98851-5|CAB11541.1| 596|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z98851-4|CAB11542.1| 607|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81527-9|CAI91172.1| 577|Caenorhabditis elegans Hypothetical pr... 29 1.5
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 29 2.0
U28944-3|AAN63455.1| 205|Caenorhabditis elegans Hypothetical pr... 29 2.0
U28944-2|AAL08028.1| 339|Caenorhabditis elegans Hypothetical pr... 29 2.0
U28944-1|AAA68368.1| 342|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical pr... 29 2.7
AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical ... 29 2.7
Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical pr... 28 3.5
U42436-6|AAM15564.1| 615|Caenorhabditis elegans Not-like (yeast... 28 3.5
U42436-5|AAF99894.2| 796|Caenorhabditis elegans Not-like (yeast... 28 3.5
Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical p... 28 4.7
Z69883-6|CAA93744.2| 461|Caenorhabditis elegans Hypothetical pr... 28 4.7
U58754-2|AAB00671.1| 391|Caenorhabditis elegans Hypothetical pr... 28 4.7
AF078157-2|AAN84818.1| 176|Caenorhabditis elegans Hypothetical ... 28 4.7
AF078157-1|AAG24071.1| 235|Caenorhabditis elegans Hypothetical ... 28 4.7
U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated p... 27 6.2
U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated p... 27 6.2
U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated p... 27 6.2
AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage ... 27 6.2
AF098500-1|AAC67400.2| 311|Caenorhabditis elegans Hypothetical ... 27 8.1
>AF067944-6|AAC17671.1| 269|Caenorhabditis elegans Hypothetical
protein K10C9.7 protein.
Length = 269
Score = 30.7 bits (66), Expect = 0.66
Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Frame = -3
Query: 516 TSPKLITLGRRKALASTVEFILNKP--LSISRPKDMLTNLTMNPLTITPTLNI 364
T P +T G+R T+ FI N P +I+ P+D + +P++ P LNI
Sbjct: 120 TFPNKVTPGQRAKARETLNFIANNPEIYAIASPQDPSSKAKTDPVS-RPQLNI 171
>U80452-2|AAK68180.1| 729|Caenorhabditis elegans Hypothetical
protein C16C8.2 protein.
Length = 729
Score = 29.9 bits (64), Expect = 1.2
Identities = 21/65 (32%), Positives = 29/65 (44%)
Frame = -3
Query: 453 LNKPLSISRPKDMLTNLTMNPLTITPTLNINMSTKLRTLTPETTSSNTRSVMVTS*RACT 274
+ K LSI +D N P TP N N+ LR + + T +N + M+ S A T
Sbjct: 167 IRKTLSIRDVRDSNANFNCAPTQETPNCNRNLCYHLRYRSFDGTCNNLKKPMIGS--AFT 224
Query: 273 VFTRL 259
RL
Sbjct: 225 ALMRL 229
>Z98851-5|CAB11541.1| 596|Caenorhabditis elegans Hypothetical
protein H12I19.5b protein.
Length = 596
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 317 ELVVSGVRVLNFVLILIFRVGVIVNGFIVRFVSMSFGLLIDRGLFKM 457
+LV+S +NF L+LIF + V+++ F + L DR + K+
Sbjct: 310 KLVLSAGSTMNFQLLLIFLISVVLSVISFEFFEKKYLRLPDRQITKI 356
>Z98851-4|CAB11542.1| 607|Caenorhabditis elegans Hypothetical
protein H12I19.5a protein.
Length = 607
Score = 29.5 bits (63), Expect = 1.5
Identities = 15/47 (31%), Positives = 26/47 (55%)
Frame = +2
Query: 317 ELVVSGVRVLNFVLILIFRVGVIVNGFIVRFVSMSFGLLIDRGLFKM 457
+LV+S +NF L+LIF + V+++ F + L DR + K+
Sbjct: 310 KLVLSAGSTMNFQLLLIFLISVVLSVISFEFFEKKYLRLPDRQITKI 356
>Z81527-9|CAI91172.1| 577|Caenorhabditis elegans Hypothetical
protein F35E12.7d protein.
Length = 577
Score = 29.5 bits (63), Expect = 1.5
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Frame = -3
Query: 516 TSPKLITLGRR--KALASTVEFILNKPLSISRPKDMLTNLTMNPLTITPTLNINMSTKLR 343
T+P + ++ R + +ST + +I+ + TN + +P+T T +IN +
Sbjct: 489 TAPIVTSVSTRATRVSSSTAPVVSTVTSTITSQSIVTTNKSSSPITSKTTTSINTGSTAT 548
Query: 342 TLTPETTSSNTRSV 301
++ ETT+ T S+
Sbjct: 549 SVHVETTTKGTSSL 562
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/69 (27%), Positives = 25/69 (36%)
Frame = -3
Query: 516 TSPKLITLGRRKALASTVEFILNKPLSISRPKDMLTNLTMNPLTITPTLNINMSTKLRTL 337
T+P T +T KP + + T P T T T ST T
Sbjct: 245 TTPATTTSETTTTTPTTTTQTTTKPTTTTTTPTTTPTTTTTPTTTTTTAKTTKSTTTTTK 304
Query: 336 TPETTSSNT 310
T +TTS+ T
Sbjct: 305 TTKTTSTPT 313
>U28944-3|AAN63455.1| 205|Caenorhabditis elegans Hypothetical
protein C18A3.4c protein.
Length = 205
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = -3
Query: 210 SAPLSSIQLLVNMFTLRVIMKTKLLVED*YCVFLY*NYLKFVAVLLLLHVY 58
+APL S+ LV M+ RV + LL FLY ++ +V + LLLH++
Sbjct: 86 TAPLVSLLALVAMYMPRVWFLSHLLS------FLYFSFALWVIICLLLHIF 130
>U28944-2|AAL08028.1| 339|Caenorhabditis elegans Hypothetical
protein C18A3.4b protein.
Length = 339
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = -3
Query: 210 SAPLSSIQLLVNMFTLRVIMKTKLLVED*YCVFLY*NYLKFVAVLLLLHVY 58
+APL S+ LV M+ RV + LL FLY ++ +V + LLLH++
Sbjct: 86 TAPLVSLLALVAMYMPRVWFLSHLLS------FLYFSFALWVIICLLLHIF 130
>U28944-1|AAA68368.1| 342|Caenorhabditis elegans Hypothetical
protein C18A3.4a protein.
Length = 342
Score = 29.1 bits (62), Expect = 2.0
Identities = 19/51 (37%), Positives = 29/51 (56%)
Frame = -3
Query: 210 SAPLSSIQLLVNMFTLRVIMKTKLLVED*YCVFLY*NYLKFVAVLLLLHVY 58
+APL S+ LV M+ RV + LL FLY ++ +V + LLLH++
Sbjct: 86 TAPLVSLLALVAMYMPRVWFLSHLLS------FLYFSFALWVIICLLLHIF 130
>Z78539-5|CAB01733.2| 1272|Caenorhabditis elegans Hypothetical protein
C31E10.8 protein.
Length = 1272
Score = 28.7 bits (61), Expect = 2.7
Identities = 20/64 (31%), Positives = 32/64 (50%)
Frame = -3
Query: 507 KLITLGRRKALASTVEFILNKPLSISRPKDMLTNLTMNPLTITPTLNINMSTKLRTLTPE 328
K+I+ G L + EF ++ + + R KD+ TNL +N NI S+K + TP
Sbjct: 1204 KIISSGEHHILTCSGEFGADEAVLLWR-KDISTNLWINDPVTHEVPNIPPSSKTSSSTPA 1262
Query: 327 TTSS 316
+ S
Sbjct: 1263 SIQS 1266
>AC024881-9|AAK71410.1| 588|Caenorhabditis elegans Hypothetical
protein Y97E10B.1 protein.
Length = 588
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/22 (45%), Positives = 16/22 (72%)
Frame = +1
Query: 292 RHHHGSRVGTCCLRCEGPQLCT 357
R+H+ R+G ++C GPQLC+
Sbjct: 525 RYHYSGRIGE--IKCPGPQLCS 544
>Z70782-8|CAA94845.2| 536|Caenorhabditis elegans Hypothetical
protein R04B5.9 protein.
Length = 536
Score = 28.3 bits (60), Expect = 3.5
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 287 HDVTITDLVLELVVSGVRVLNFVLILIFRVGVIVNGFIVRFVSMSFGLLIDRGLFKM 457
H+VT+ ++ +V + V I RV + GF S S G++ D GLF++
Sbjct: 51 HNVTLLEIDFLGIVDSTKSAKLVKKTIVRVPKKMQGFKNVIQSFSEGVMEDEGLFEL 107
>U42436-6|AAM15564.1| 615|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 4, isoform b protein.
Length = 615
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -2
Query: 343 DPHTGDNKFQHEIRDGDVVKGVYGLHEADXSVRTVEYSSDKHKGFSAIVKH 191
DP +N+F+ +I DV + L D + +S + + G A KH
Sbjct: 177 DPEGNENEFEEDIHRNDVSDLMSKLDVNDDRLARTSFSENDYLGIPAPAKH 227
>U42436-5|AAF99894.2| 796|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 4, isoform a protein.
Length = 796
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = -2
Query: 343 DPHTGDNKFQHEIRDGDVVKGVYGLHEADXSVRTVEYSSDKHKGFSAIVKH 191
DP +N+F+ +I DV + L D + +S + + G A KH
Sbjct: 358 DPEGNENEFEEDIHRNDVSDLMSKLDVNDDRLARTSFSENDYLGIPAPAKH 408
>Z81044-11|CAB02809.2| 476|Caenorhabditis elegans Hypothetical
protein C30H6.4 protein.
Length = 476
Score = 27.9 bits (59), Expect = 4.7
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 2/68 (2%)
Frame = -3
Query: 471 STVEFILNKPLSISRPKDMLTNLTMNPLT--ITPTLNINMSTKLRTLTPETTSSNTRSVM 298
+T+ + S S ++T T+ T T T +T ++T TP TTS+ T +
Sbjct: 271 TTIPSTTSSTTSTSTTTSVVTTTTVTSTTEPTTSTSTPTTTTTMQTTTPSTTSTPTTTST 330
Query: 297 VTS*RACT 274
T+ A T
Sbjct: 331 TTTTSAST 338
>Z69883-6|CAA93744.2| 461|Caenorhabditis elegans Hypothetical
protein C27C12.2 protein.
Length = 461
Score = 27.9 bits (59), Expect = 4.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -3
Query: 453 LNKPLSISRPKDMLTNLTMNPLTITPTLN 367
LNKP+ D L TMN + TPT+N
Sbjct: 24 LNKPILTFADNDCLKTPTMNDMLKTPTVN 52
>U58754-2|AAB00671.1| 391|Caenorhabditis elegans Hypothetical
protein C39H7.4 protein.
Length = 391
Score = 27.9 bits (59), Expect = 4.7
Identities = 17/63 (26%), Positives = 29/63 (46%), Gaps = 11/63 (17%)
Frame = -3
Query: 462 EFILNKPLSISRPKDMLTNLTMNPLT-----------ITPTLNINMSTKLRTLTPETTSS 316
+++ +P++ P+D L+ P T ITP L+ + S + L PETT+
Sbjct: 130 DYVRERPITSENPRDDFIRLSEYPATSAVIGLQPPRLITPVLDADESKSMNQLVPETTAD 189
Query: 315 NTR 307
R
Sbjct: 190 VDR 192
>AF078157-2|AAN84818.1| 176|Caenorhabditis elegans Hypothetical
protein F25E5.8b protein.
Length = 176
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -2
Query: 517 YKPQAHYTRPQEGFSFHRGVH--LEQAPVYQQTEGHAHESHDE 395
+KP+ H+ + G S + G H + P + +G H +H +
Sbjct: 44 HKPEEHHHKEHHGHSLYFGKHSGKKHLPPVVENDGDTHSNHSD 86
>AF078157-1|AAG24071.1| 235|Caenorhabditis elegans Hypothetical
protein F25E5.8a protein.
Length = 235
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/43 (25%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -2
Query: 517 YKPQAHYTRPQEGFSFHRGVH--LEQAPVYQQTEGHAHESHDE 395
+KP+ H+ + G S + G H + P + +G H +H +
Sbjct: 44 HKPEEHHHKEHHGHSLYFGKHSGKKHLPPVVENDGDTHSNHSD 86
>U55374-7|AAP82641.1| 286|Caenorhabditis elegans Uncoordinated
protein 2, isoform d protein.
Length = 286
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = -2
Query: 352 KVEDPHTGDNKFQHEIRDGDVVKGVYGLHEADXSVRTVEYSSDKHKGFSAIVKHSAPGQH 173
+ E P + +++Q IRD + + Y E S +Y D+ + H QH
Sbjct: 20 RTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRSSHDPQYHQDQQQ--QQQPHHQQHSQH 77
Query: 172 VHIESHHE 149
+ SHH+
Sbjct: 78 LQ-HSHHK 84
>U55374-6|AAM69092.1| 1926|Caenorhabditis elegans Uncoordinated
protein 2, isoform c protein.
Length = 1926
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = -2
Query: 352 KVEDPHTGDNKFQHEIRDGDVVKGVYGLHEADXSVRTVEYSSDKHKGFSAIVKHSAPGQH 173
+ E P + +++Q IRD + + Y E S +Y D+ + H QH
Sbjct: 1660 RTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRSSHDPQYHQDQQQ--QQQPHHQQHSQH 1717
Query: 172 VHIESHHE 149
+ SHH+
Sbjct: 1718 LQ-HSHHK 1724
>U55374-5|AAP82640.2| 2027|Caenorhabditis elegans Uncoordinated
protein 2, isoform b protein.
Length = 2027
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = -2
Query: 352 KVEDPHTGDNKFQHEIRDGDVVKGVYGLHEADXSVRTVEYSSDKHKGFSAIVKHSAPGQH 173
+ E P + +++Q IRD + + Y E S +Y D+ + H QH
Sbjct: 1761 RTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRSSHDPQYHQDQQQ--QQQPHHQQHSQH 1818
Query: 172 VHIESHHE 149
+ SHH+
Sbjct: 1819 LQ-HSHHK 1825
>AY264781-1|AAP13107.1| 2027|Caenorhabditis elegans high voltage
activated calciumchannel alpha-1 subunit protein.
Length = 2027
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = -2
Query: 352 KVEDPHTGDNKFQHEIRDGDVVKGVYGLHEADXSVRTVEYSSDKHKGFSAIVKHSAPGQH 173
+ E P + +++Q IRD + + Y E S +Y D+ + H QH
Sbjct: 1761 RTESPPSSRSEYQMSIRDPIIRRNRYNTMEHSRSSHDPQYHQDQQQ--QQQPHHQQHSQH 1818
Query: 172 VHIESHHE 149
+ SHH+
Sbjct: 1819 LQ-HSHHK 1825
>AF098500-1|AAC67400.2| 311|Caenorhabditis elegans Hypothetical
protein F43B10.1 protein.
Length = 311
Score = 27.1 bits (57), Expect = 8.1
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = -3
Query: 468 TVEFILNKPLSISRPKDMLTNLTMNPLTITPTLNINMSTKLRTLTPETTSSNTRSV 301
T F+ LS P D L + + P TP N+N R+ ETT+S R+V
Sbjct: 152 TRPFMEKLDLSHLGPSDPLRDSDLQPAITTPRKNLNFDLP-RSPRIETTTSADRNV 206
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,023,076
Number of Sequences: 27780
Number of extensions: 189541
Number of successful extensions: 604
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 604
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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