Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329G07f
         (363 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical pr...    28   1.7  
U41538-5|AAG00012.2|  762|Caenorhabditis elegans Hypothetical pr...    28   2.3  
AF098997-10|AAC68712.2|  325|Caenorhabditis elegans Serpentine r...    27   3.0  
AF067211-8|ABB51202.1|   99|Caenorhabditis elegans Hypothetical ...    27   5.3  
Z83731-6|CAN86605.2|  208|Caenorhabditis elegans Hypothetical pr...    26   7.0  
Z83731-5|CAN86604.2|  223|Caenorhabditis elegans Hypothetical pr...    26   7.0  
Z50739-2|CAA90602.2|  381|Caenorhabditis elegans Hypothetical pr...    26   9.3  
AL031633-19|CAA21031.1|  710|Caenorhabditis elegans Hypothetical...    26   9.3  
AF098997-9|AAC68720.1|  325|Caenorhabditis elegans Serpentine re...    26   9.3  

>Z99282-1|CAB16532.1| 1037|Caenorhabditis elegans Hypothetical
           protein Y70C5A.2 protein.
          Length = 1037

 Score = 28.3 bits (60), Expect = 1.7
 Identities = 14/25 (56%), Positives = 18/25 (72%)
 Frame = -2

Query: 131 LFLGGVQITLMFLCWATFLKIWLLA 57
           LFL G+Q+TL+F C+  FL I  LA
Sbjct: 214 LFLLGIQVTLLF-CFLLFLPICFLA 237


>U41538-5|AAG00012.2|  762|Caenorhabditis elegans Hypothetical
           protein R04E5.2 protein.
          Length = 762

 Score = 27.9 bits (59), Expect = 2.3
 Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
 Frame = +1

Query: 61  NNQIFKNVAQQRNMSVICTPPRNKVSRGEM-IFLASLM 171
           N + F+N+ Q+    V+  PP+N  S G + +F A +M
Sbjct: 572 NPKAFENLIQRNIREVLIVPPKNSTSPGTLNLFEAGVM 609


>AF098997-10|AAC68712.2|  325|Caenorhabditis elegans Serpentine
           receptor, class i protein43 protein.
          Length = 325

 Score = 27.5 bits (58), Expect = 3.0
 Identities = 14/39 (35%), Positives = 21/39 (53%)
 Frame = -2

Query: 140 LETLFLGGVQITLMFLCWATFLKIWLLARSKFLIPNILF 24
           + T  L G+Q  L+FLC+A   +     +   +IP ILF
Sbjct: 91  ITTHLLLGIQYVLLFLCFARRHQAIAKIKQHHVIPEILF 129


>AF067211-8|ABB51202.1|   99|Caenorhabditis elegans Hypothetical
           protein B0205.13 protein.
          Length = 99

 Score = 26.6 bits (56), Expect = 5.3
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = -1

Query: 204 HPGWDGRPAHHHQAGEEDHLTSGNLVSWRSADNAHVP 94
           HP W+    HHHQ   + H  + N V+ ++A +  +P
Sbjct: 54  HPWWN----HHHQCWHQYHHRTENTVNSQNAPSQVIP 86


>Z83731-6|CAN86605.2|  208|Caenorhabditis elegans Hypothetical
           protein M04C9.1b protein.
          Length = 208

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 174 HHQAGEEDHLTSGNLVSWRSADN 106
           +HQ  E+ +L  GN VS  S DN
Sbjct: 100 YHQKDEKGYLPEGNKVSCESVDN 122


>Z83731-5|CAN86604.2|  223|Caenorhabditis elegans Hypothetical
           protein M04C9.1a protein.
          Length = 223

 Score = 26.2 bits (55), Expect = 7.0
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 174 HHQAGEEDHLTSGNLVSWRSADN 106
           +HQ  E+ +L  GN VS  S DN
Sbjct: 115 YHQKDEKGYLPEGNKVSCESVDN 137


>Z50739-2|CAA90602.2|  381|Caenorhabditis elegans Hypothetical
           protein F13D2.3 protein.
          Length = 381

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 13/43 (30%), Positives = 23/43 (53%)
 Frame = +1

Query: 151 IFLASLMVVGWSAIPAWVLVNIKHYRDKQ*NYHKKICSLFCSK 279
           I +AS + +    IP W    + HY D++    + +C++F SK
Sbjct: 225 ITIASYVRMMSRLIPFWPFTVLNHYEDER---QQTLCTIFWSK 264


>AL031633-19|CAA21031.1|  710|Caenorhabditis elegans Hypothetical
           protein Y39A1A.22 protein.
          Length = 710

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 12/35 (34%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
 Frame = +1

Query: 121 PRNKVSRGEMIFLASLMVVGWS-AIPAWVLVNIKH 222
           PRN +S   ++ +AS M++ WS A+ A++  ++ H
Sbjct: 299 PRNHLSYQTLMQIASFMIMLWSFAVLAYLYAHMLH 333


>AF098997-9|AAC68720.1|  325|Caenorhabditis elegans Serpentine
           receptor, class i protein42 protein.
          Length = 325

 Score = 25.8 bits (54), Expect = 9.3
 Identities = 12/31 (38%), Positives = 18/31 (58%)
 Frame = -2

Query: 119 GVQITLMFLCWATFLKIWLLARSKFLIPNIL 27
           GVQ  L+FLC+A   +     + + +IPN L
Sbjct: 98  GVQYVLLFLCFARRHQAIAKIKQQHVIPNFL 128


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,300,184
Number of Sequences: 27780
Number of extensions: 152191
Number of successful extensions: 345
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 335
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 345
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 503476126
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)