Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329G04f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY129019-1|AAM98762.1|  123|Homo sapiens unknown protein.              31   1.9  
BC064916-1|AAH64916.1|  511|Homo sapiens SMG6 protein protein.         29   7.5  
AY168921-1|AAO17581.1| 1388|Homo sapiens Est1p-like protein A pr...    29   7.5  
AY145883-1|AAN46114.1| 1419|Homo sapiens telomerase subunit EST1...    29   7.5  
AB018275-1|BAA34452.2| 1449|Homo sapiens KIAA0732 protein protein.     29   7.5  

>AY129019-1|AAM98762.1|  123|Homo sapiens unknown protein.
          Length = 123

 Score = 31.5 bits (68), Expect = 1.9
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = -2

Query: 220 YICDPGNFCSSNQQKL*IKSIFQSSMIRNYFCEKNPRIYCSQIR 89
           +ICDP  FCSS+      K++    +  N++C      +C  I+
Sbjct: 27  FICDPRQFCSSSSIPREAKTLDTPGLYYNFYCYFRAYSFCLYIK 70


>BC064916-1|AAH64916.1|  511|Homo sapiens SMG6 protein protein.
          Length = 511

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 52  LSCCIHYLTDKAHEF 96
           LSCC+HY  DKA +F
Sbjct: 449 LSCCLHYCKDKAKDF 463


>AY168921-1|AAO17581.1| 1388|Homo sapiens Est1p-like protein A
            protein.
          Length = 1388

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 52   LSCCIHYLTDKAHEF 96
            LSCC+HY  DKA +F
Sbjct: 1326 LSCCLHYCKDKAKDF 1340


>AY145883-1|AAN46114.1| 1419|Homo sapiens telomerase subunit EST1A
            protein.
          Length = 1419

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 52   LSCCIHYLTDKAHEF 96
            LSCC+HY  DKA +F
Sbjct: 1357 LSCCLHYCKDKAKDF 1371


>AB018275-1|BAA34452.2| 1449|Homo sapiens KIAA0732 protein protein.
          Length = 1449

 Score = 29.5 bits (63), Expect = 7.5
 Identities = 10/15 (66%), Positives = 12/15 (80%)
 Frame = +1

Query: 52   LSCCIHYLTDKAHEF 96
            LSCC+HY  DKA +F
Sbjct: 1387 LSCCLHYCKDKAKDF 1401


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,285,149
Number of Sequences: 237096
Number of extensions: 1453601
Number of successful extensions: 1693
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1693
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)