Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329G04f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical pr...    28   4.7  
Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U50068-7|AAB37735.1|  479|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U29377-2|AAA68713.4|  627|Caenorhabditis elegans Hypothetical pr...    28   4.7  
U29377-1|AAZ94294.1|  773|Caenorhabditis elegans Hypothetical pr...    28   4.7  
AC024793-2|AAT39976.1|  338|Caenorhabditis elegans Hypothetical ...    27   6.2  

>Z48583-4|CAN99691.1| 3394|Caenorhabditis elegans Hypothetical protein
            F54B3.1b protein.
          Length = 3394

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +2

Query: 188  RRTKVPRVTDVHVRCLKKYISI 253
            +R +VP VTD+H   + K++++
Sbjct: 1069 KRIEVPTVTDIHAEAVSKFVTV 1090


>Z48583-3|CAA88472.1| 3396|Caenorhabditis elegans Hypothetical protein
            F54B3.1a protein.
          Length = 3396

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 8/22 (36%), Positives = 16/22 (72%)
 Frame = +2

Query: 188  RRTKVPRVTDVHVRCLKKYISI 253
            +R +VP VTD+H   + K++++
Sbjct: 1069 KRIEVPTVTDIHAEAVSKFVTV 1090


>U50068-7|AAB37735.1|  479|Caenorhabditis elegans Hypothetical
           protein C01G5.3 protein.
          Length = 479

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = +1

Query: 97  ANNKYVGFFHKNNYVSLMIEISTLFTISVDSKNKSSQGHRCTCSMFKKIHIYKNLYLLN 273
           A   Y   ++K+N + L+ E S+ FT + D+K K  QG   T   ++K+   + +  +N
Sbjct: 156 AKKPYPSKYNKDNGLFLVDERSSFFTKTPDTK-KIPQGSADTYDQYRKLADVRKMTTVN 213


>U29377-2|AAA68713.4|  627|Caenorhabditis elegans Hypothetical
           protein K05F1.6b protein.
          Length = 627

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 109 YVGFFHKNNYVSLMIEISTLF 171
           + G+FH NN ++  IEI TLF
Sbjct: 372 FTGYFHLNNGIAGAIEIPTLF 392


>U29377-1|AAZ94294.1|  773|Caenorhabditis elegans Hypothetical
           protein K05F1.6a protein.
          Length = 773

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 11/21 (52%), Positives = 15/21 (71%)
 Frame = +1

Query: 109 YVGFFHKNNYVSLMIEISTLF 171
           + G+FH NN ++  IEI TLF
Sbjct: 518 FTGYFHLNNGIAGAIEIPTLF 538


>AC024793-2|AAT39976.1|  338|Caenorhabditis elegans Hypothetical
           protein Y48G1BL.7 protein.
          Length = 338

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 10/24 (41%), Positives = 14/24 (58%)
 Frame = +1

Query: 46  TQLSCCIHYLTDKAHEFANNKYVG 117
           T L+C +  + D+ H FA N Y G
Sbjct: 201 TNLTCFVDKMYDRMHRFARNPYKG 224


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,167,479
Number of Sequences: 27780
Number of extensions: 257909
Number of successful extensions: 482
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 482
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)