Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS329G01f
(521 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 24 1.1
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 21 5.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 21 5.8
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 21 5.8
AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein. 21 5.8
AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex det... 21 7.7
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 21 7.7
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 7.7
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 21 7.7
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 7.7
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 7.7
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 7.7
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 7.7
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 7.7
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 7.7
AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex det... 21 7.7
AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex det... 21 7.7
AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex det... 21 7.7
AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex det... 21 7.7
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 21 7.7
AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex det... 21 7.7
AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex det... 21 7.7
AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex det... 21 7.7
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 21 7.7
AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex det... 21 7.7
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 23.8 bits (49), Expect = 1.1
Identities = 16/52 (30%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = +2
Query: 119 MRRLPPQQIEKNLTDLIDL-VPSMCDDLLSSVDQPLKIAQDRSNGKDYLLCD 271
+R L + I++ +D+ +L V C DL S ++ L+ + GKD L D
Sbjct: 156 IRTLLDESIQRK-SDITELDVSKRCKDLASFMENLLQETRTPGFGKDVLATD 206
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 22.6 bits (46), Expect = 2.5
Identities = 8/11 (72%), Positives = 9/11 (81%)
Frame = +2
Query: 251 KDYLLCDYNRD 283
K YL CDY+RD
Sbjct: 41 KLYLFCDYDRD 51
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 5.8
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 224 KIAQDRSNGKDYLLCDYNRDGDSYRSPWSNTYD 322
KI SN +Y +YN ++Y + ++N Y+
Sbjct: 80 KIISSLSN--NYKYSNYNNYNNNYNNNYNNNYN 110
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.4 bits (43), Expect = 5.8
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = +2
Query: 224 KIAQDRSNGKDYLLCDYNRDGDSYRSPWSNTYD 322
KI SN +Y +YN ++Y + ++N Y+
Sbjct: 80 KIISSLSN--NYKYSNYNNYNNNYNNNYNNNYN 110
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.4 bits (43), Expect = 5.8
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = -1
Query: 308 TKETYRSHRRDCNRIINSLSRCYDPEQSLEADLLMIIGR-HTYSERGLSN 162
TK +R R+I +S + + L+I+G HTYSE G S+
Sbjct: 144 TKPLKYGVKRTPRRMIVYVSLVWLGAACISLPPLLIMGNEHTYSETGPSH 193
>AB231585-1|BAE17127.1| 898|Apis mellifera Mahya protein.
Length = 898
Score = 21.4 bits (43), Expect = 5.8
Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
Frame = +2
Query: 152 NLTDLIDLVPSMC----DDLLSSVDQPLKIAQDRSNGKDYLLCDYNRDGDSYRSPWSNTY 319
N++D I L PS D SS+D+ + D S GK ++ + + W N
Sbjct: 788 NISD-IALYPSQTTHGYDIYASSIDKENILFLDLSTGKVEMITGVGKATSPNLTKWGNPN 846
Query: 320 DPPLDDG 340
P + G
Sbjct: 847 RPIVQSG 853
>AY569721-1|AAS86674.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 149 VILIRRTGEGSKPI 162
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 149 VILIRRTGEGSKPI 162
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 160 VILIRRTGEGSKPI 173
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 160 VILIRRTGEGSKPI 173
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 160 VILIRRTGEGSKPI 173
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 160 VILIRRTGEGSKPI 173
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 160 VILIRRTGEGSKPI 173
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 160 VILIRRTGEGSKPI 173
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 149 VILIRRTGEGSKPI 162
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 160 VILIRRTGEGSKPI 173
>AY569698-1|AAS86651.1| 407|Apis mellifera complementary sex
determiner protein.
Length = 407
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 160 VILIRRTGEGSKPI 173
>AY569697-1|AAS86650.1| 413|Apis mellifera complementary sex
determiner protein.
Length = 413
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 160 VILIRRTGEGSKPI 173
>AY569696-1|AAS86649.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 160 VILIRRTGEGSKPI 173
>AY569695-1|AAS86648.1| 414|Apis mellifera complementary sex
determiner protein.
Length = 414
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 160 VILIRRTGEGSKPI 173
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 149 VILIRRTGEGSKPI 162
>AY352277-1|AAQ67418.1| 418|Apis mellifera complementary sex
determiner protein.
Length = 418
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 165 VILIRRTGEGSKPI 178
>AY352276-1|AAQ67417.1| 385|Apis mellifera complementary sex
determiner protein.
Length = 385
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 160 VILIRRTGEGSKPI 173
>AY350618-1|AAQ57660.1| 425|Apis mellifera complementary sex
determiner protein.
Length = 425
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 160 VILIRRTGEGSKPI 173
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 160 VILIRRTGEGSKPI 173
>AY350615-1|AAQ57657.1| 410|Apis mellifera complementary sex
determiner protein.
Length = 410
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/14 (57%), Positives = 12/14 (85%)
Frame = +2
Query: 473 VILIKKAGDGSQKI 514
VILI++ G+GS+ I
Sbjct: 160 VILIRRTGEGSKPI 173
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,399
Number of Sequences: 438
Number of extensions: 2728
Number of successful extensions: 27
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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