Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329F12f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   2.5  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   5.8  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    21   5.8  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    21   7.7  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    21   7.7  
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    21   7.7  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    21   7.7  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 18/72 (25%), Positives = 33/72 (45%)
 Frame = +3

Query: 48  LPHQLKPY*ILLQLKHVQISVYSDALFKRIEFITFDRFSLAWHWLVCLVLTGTFSAGKYC 227
           LP  +     LL++  ++     D+ FK  + +TF   ++  H+L  L    T       
Sbjct: 99  LPENMTSEYRLLEVDWLKNMWRPDSFFKNAKSVTFQTMTIPNHYL-WLYKDKTILYMVKL 157

Query: 228 RTQVSCSIN*LI 263
             ++SC++N LI
Sbjct: 158 TLKLSCAMNFLI 169


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/35 (28%), Positives = 21/35 (60%)
 Frame = +3

Query: 96  VQISVYSDALFKRIEFITFDRFSLAWHWLVCLVLT 200
           V +++Y+D   +RI  +     ++A  ++ CLV+T
Sbjct: 46  VCVAIYTDRGLRRIGNLFLASLAIADLFVGCLVMT 80


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 64  NPIKFCYS*SMFRYPFIRMLCSKGLNLSHL 153
           NPI +      FR PF  +L  +  NL+H+
Sbjct: 423 NPIIYATLNRDFRKPFREILYFRCSNLNHM 452


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 472 FVHEFQKIATFKISPHF 422
           F + F+K A+ K SP+F
Sbjct: 459 FFNMFKKFASLKKSPYF 475


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +3

Query: 117 DALFKRIEFITFDRFSLAWHWL 182
           D  FK  + +TF   S+  H+L
Sbjct: 91  DCFFKNAKKVTFHEMSIPNHYL 112


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/42 (26%), Positives = 18/42 (42%)
 Frame = -2

Query: 490 RPFFWIFVHEFQKIATFKISPHFNGLRQQSDILKLTKMFQKC 365
           R   WIF   FQK  +  ++ +    R Q+ ++       KC
Sbjct: 371 RQELWIFTISFQKYMSGTLNSNETNFRIQAGLVDELVRGTKC 412


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = -2

Query: 472 FVHEFQKIATFKISPHF 422
           F + F+K A+ K SP+F
Sbjct: 459 FFNMFKKFASLKKSPYF 475


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,685
Number of Sequences: 438
Number of extensions: 3059
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)