Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS329F11f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 304 3e-83
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 304 3e-83
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 225 4e-61
Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical pr... 128 2e-30
Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical pr... 128 2e-30
Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical pr... 112 2e-25
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 87 9e-18
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 59 2e-09
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 59 2e-09
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 52 2e-07
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 52 2e-07
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 52 2e-07
L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding pro... 34 0.054
AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditi... 33 0.094
AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical... 33 0.094
Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical pr... 31 0.66
AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical ... 29 1.5
AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical ... 29 1.5
AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein. 29 1.5
AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein. 29 1.5
Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical pr... 27 6.2
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 304 bits (746), Expect = 3e-83
Identities = 141/173 (81%), Positives = 154/173 (89%)
Frame = +1
Query: 1 TSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEP 180
TSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE
Sbjct: 106 TSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEA 165
Query: 181 RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADG 360
RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A G
Sbjct: 166 RFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASG 225
Query: 361 KCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIV 519
K L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V
Sbjct: 226 KTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVV 278
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 304 bits (746), Expect = 3e-83
Identities = 141/173 (81%), Positives = 154/173 (89%)
Frame = +1
Query: 1 TSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEP 180
TSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQLIV NKMDSTEPP+SE
Sbjct: 106 TSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQLIVACNKMDSTEPPFSEA 165
Query: 181 RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADG 360
RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+ MPWFKGW VERKEG A G
Sbjct: 166 RFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSNMPWFKGWAVERKEGNASG 225
Query: 361 KCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIV 519
K L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRVETG++KPG +V
Sbjct: 226 KTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRVETGIIKPGMVV 278
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 225 bits (551), Expect(2) = 4e-61
Identities = 101/131 (77%), Positives = 114/131 (87%)
Frame = +1
Query: 127 LIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTK 306
L+V NKMDSTEPP+SE RF EI EVS +IKKIGYNP AV FVPISG++GDNMLE S+
Sbjct: 114 LVVACNKMDSTEPPFSEARFTEITNEVSGFIKKIGYNPKAVPFVPISGFNGDNMLEVSSN 173
Query: 307 MPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRV 486
MPWFKGW VERKEG A GK L+EALD+I+PP RPTD+PLRLPLQDVYKIGGIGTVPVGRV
Sbjct: 174 MPWFKGWAVERKEGNASGKTLLEALDSIIPPQRPTDRPLRLPLQDVYKIGGIGTVPVGRV 233
Query: 487 ETGVLKPGTIV 519
ETG++KPG +V
Sbjct: 234 ETGIIKPGMVV 244
Score = 26.6 bits (56), Expect(2) = 4e-61
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 1 TSQADCAVLIVA 36
TSQADCAVL+VA
Sbjct: 106 TSQADCAVLVVA 117
>Z81098-7|CAI79193.2| 592|Caenorhabditis elegans Hypothetical
protein K07A12.4b protein.
Length = 592
Score = 128 bits (310), Expect = 2e-30
Identities = 69/166 (41%), Positives = 106/166 (63%), Gaps = 1/166 (0%)
Frame = +1
Query: 1 TSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEP 180
TSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+ + +S+
Sbjct: 269 TSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQD 326
Query: 181 RFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKAD 357
RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ D
Sbjct: 327 RFDEIKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWY------------D 371
Query: 358 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG 495
G CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G
Sbjct: 372 GPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESG 417
>Z81098-6|CAB03180.3| 610|Caenorhabditis elegans Hypothetical
protein K07A12.4a protein.
Length = 610
Score = 128 bits (310), Expect = 2e-30
Identities = 69/166 (41%), Positives = 106/166 (63%), Gaps = 1/166 (0%)
Frame = +1
Query: 1 TSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEP 180
TSQAD A+L+V A TGEFE G GQT+EHALL +LGV QLIV VNK+D+ + +S+
Sbjct: 287 TSQADAAILVVNATTGEFETGFENGGQTKEHALLLRSLGVTQLIVAVNKLDTVD--WSQD 344
Query: 181 RFEEIKKEVSSYI-KKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKAD 357
RF+EIK +S ++ ++ G++ FVP+SG+ G+N+++ ++ W+ D
Sbjct: 345 RFDEIKNNLSVFLTRQAGFSKP--KFVPVSGFTGENLIK-RMELDWY------------D 389
Query: 358 GKCLIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETG 495
G CL+E +D+ + P P+D PLR+ + DV K+ V G++E+G
Sbjct: 390 GPCLLELIDSFVAPQPPSDGPLRIGISDVLKVASNQLVVSGKIESG 435
>Z92835-1|CAB07395.2| 532|Caenorhabditis elegans Hypothetical
protein H19N07.1 protein.
Length = 532
Score = 112 bits (269), Expect = 2e-25
Identities = 63/171 (36%), Positives = 100/171 (58%), Gaps = 2/171 (1%)
Frame = +1
Query: 4 SQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPR 183
+QAD AVL+++A GEFE G + GQTREH++L T GVK L++ VNKMD + E R
Sbjct: 209 NQADLAVLVISARRGEFETGFDRGGQTREHSMLVKTAGVKHLVILVNKMDDPTVKWEEER 268
Query: 184 FEEIKKEVSSYIKKIGYNPAA-VAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADG 360
F+EI+ +++ +++K+G+NP + +VP SG G + + T W G
Sbjct: 269 FKEIEGKLTPFLRKLGFNPKTDITYVPCSGLTGAFIKDRPTGSE--GNWY--------SG 318
Query: 361 KCLIEALDAILPP-ARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 510
C IE +D +LP R + P+R + + Y +GTV +G++E+G ++ G
Sbjct: 319 PCFIEFIDVLLPSYKRDFNGPVRCTVAEKY--SEMGTVIIGKMESGCVQKG 367
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 86.6 bits (205), Expect = 9e-18
Identities = 46/67 (68%), Positives = 51/67 (76%)
Frame = +1
Query: 1 TSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEP 180
TSQADCAVL+VA GTGEFEAGISKNGQTREHALLA TLGVKQL V+ T P S
Sbjct: 106 TSQADCAVLVVACGTGEFEAGISKNGQTREHALLAQTLGVKQL---VSLRSPTRSPDSSR 162
Query: 181 RFEEIKK 201
R + I++
Sbjct: 163 RSDTIQR 169
Score = 60.9 bits (141), Expect = 5e-10
Identities = 40/100 (40%), Positives = 48/100 (48%)
Frame = +2
Query: 191 KSRRKYPHTSRRLATTQLLSLSCPFLDGTETTCWSLQPKCLGSRDGRWSVRKAKLTENAS 370
+S + P +SRR T Q L D TETTC C GSRDG + RK L E S
Sbjct: 152 RSPTRSPDSSRRSDTIQRLFHLSQSPDSTETTCLRSPRTCHGSRDGLLNARKETLPERPS 211
Query: 371 LKLSMPSCHLPAPLTSPCVFPCKTYTKSVVLVPCPSAELK 490
+L PS H A LT VF + T+S L P S L+
Sbjct: 212 SRLLTPSSHHNAQLTDHSVFHSRMCTRSEELEPSQSDVLR 251
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 59.3 bits (137), Expect = 2e-09
Identities = 57/173 (32%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Frame = +1
Query: 1 TSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEP 180
TSQ D AVL++AA G E QT+EH +LA +GVK + + +NK D E E
Sbjct: 129 TSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----ED 177
Query: 181 RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADG 360
+ ++ E + G+N GD P +G + EG+ D
Sbjct: 178 DLDLVEMEARELLSLHGFN-------------GD-------ATPVIRGSALSALEGQ-DI 216
Query: 361 KC---LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 510
C LI+ALD++ P R +P+ I G GTV VG +E GVLK G
Sbjct: 217 SCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKG 269
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 59.3 bits (137), Expect = 2e-09
Identities = 57/173 (32%), Positives = 79/173 (45%), Gaps = 3/173 (1%)
Frame = +1
Query: 1 TSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEP 180
TSQ D AVL++AA G E QT+EH +LA +GVK + + +NK D E E
Sbjct: 129 TSQMDVAVLVIAATDGVME-------QTKEHLILAKQVGVKNMAIFINKADLVE----ED 177
Query: 181 RFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKADG 360
+ ++ E + G+N GD P +G + EG+ D
Sbjct: 178 DLDLVEMEARELLSLHGFN-------------GD-------ATPVIRGSALSALEGQ-DI 216
Query: 361 KC---LIEALDAILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 510
C LI+ALD++ P R +P+ I G GTV VG +E GVLK G
Sbjct: 217 SCIERLIDALDSLPEPDRNEKDTFVMPIASKTAITGRGTVIVGTLERGVLKKG 269
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 52.4 bits (120), Expect = 2e-07
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 4/173 (2%)
Frame = +1
Query: 4 SQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSE 177
+Q + A+L+VAA G QTREH LLA +GV ++V +NK+D E P +E
Sbjct: 134 AQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAE 184
Query: 178 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKAD 357
R E ++ ++ + + GY P P+ G + K P + G+
Sbjct: 185 TR-ELVEMDIREQLNEFGY-PGDTC--PVI--FGSALCALEGKQP---------EIGEEA 229
Query: 358 GKCLIEALD--AILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 510
K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G
Sbjct: 230 VKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRG 281
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 52.4 bits (120), Expect = 2e-07
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 4/173 (2%)
Frame = +1
Query: 4 SQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSE 177
+Q + A+L+VAA G QTREH LLA +GV ++V +NK+D E P +E
Sbjct: 135 AQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAE 185
Query: 178 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKAD 357
R E ++ ++ + + GY P P+ G + K P + G+
Sbjct: 186 TR-ELVEMDIREQLNEFGY-PGDTC--PVI--FGSALCALEGKQP---------EIGEEA 230
Query: 358 GKCLIEALD--AILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 510
K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G
Sbjct: 231 VKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRG 282
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 52.4 bits (120), Expect = 2e-07
Identities = 54/173 (31%), Positives = 85/173 (49%), Gaps = 4/173 (2%)
Frame = +1
Query: 4 SQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGV--KQLIVGVNKMDSTEPPYSE 177
+Q + A+L+VAA G QTREH LLA +GV ++V +NK+D E P +E
Sbjct: 135 AQMEGAILVVAATDGPMP-------QTREHLLLARQVGVPLDNIVVFMNKVD--EVPDAE 185
Query: 178 PRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHGDNMLEPSTKMPWFKGWQVERKEGKAD 357
R E ++ ++ + + GY P P+ G + K P + G+
Sbjct: 186 TR-ELVEMDIREQLNEFGY-PGDTC--PVI--FGSALCALEGKQP---------EIGEEA 230
Query: 358 GKCLIEALD--AILPPARPTDKPLRLPLQDVYKIGGIGTVPVGRVETGVLKPG 510
K L+E LD ++P + ++P+ + VY I G GTV G++E G+LK G
Sbjct: 231 VKQLLEVLDNKFVIPERKVNEEPM-FAAEHVYSIVGRGTVITGKLERGILKRG 282
>L40996-1|AAA86431.1| 593|Caenorhabditis elegans GTP-binding
protein protein.
Length = 593
Score = 34.3 bits (75), Expect = 0.054
Identities = 41/151 (27%), Positives = 66/151 (43%), Gaps = 3/151 (1%)
Frame = +1
Query: 76 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 255
G T+EH LA +L V +V V K+D P Y EE K ++ ++ P V
Sbjct: 268 GTTKEHLSLALSLHVPVYLV-VTKIDMC-PAYI---LEETMKNITRLVRSAKKLPILVRN 322
Query: 256 VPISGWHGDNMLEPSTKM-PWFKGWQVERKEGKADGKCLIEALDAILPPARPTDK--PLR 426
+ N PS K+ P F QV EG L+ ++P R ++ P
Sbjct: 323 MDDCVHAAVNF--PSKKVCPIF---QVSNVEGT--NLPLLRQFLNMVPLRRQLNENDPAH 375
Query: 427 LPLQDVYKIGGIGTVPVGRVETGVLKPGTIV 519
+ D+Y + G+GT+ G + +G ++ I+
Sbjct: 376 FQIDDIYWVDGVGTIASGTLLSGTIRLNDIL 406
>AF125969-2|AAD14761.1| 613|Caenorhabditis elegans Caenorhabditis
gtp-binding proteinprotein 1 protein.
Length = 613
Score = 33.5 bits (73), Expect = 0.094
Identities = 40/153 (26%), Positives = 67/153 (43%), Gaps = 5/153 (3%)
Frame = +1
Query: 76 GQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAF 255
G T+EH LA +L V +V V K+D E + I + V S KK+
Sbjct: 267 GTTKEHLSLALSLHVPVYLV-VTKIDMCPANILEETMKNITRLVRS-AKKL--------- 315
Query: 256 VPISGWHGDNMLEPSTKMPWFKG---WQVERKEGKADGKCLIEALDAILPPARPTDK--P 420
PI + D+++ + P K +QV EG L+ I+P R ++ P
Sbjct: 316 -PILVRNMDDVVHAAVNFPSKKVCPIFQVSNVEGT--NLPLLRQFLNIVPLRRQLNENDP 372
Query: 421 LRLPLQDVYKIGGIGTVPVGRVETGVLKPGTIV 519
+ D+Y + G+GT+ G + +G ++ I+
Sbjct: 373 AHFQIDDIYWVDGVGTIASGTLLSGTIRLNDIL 405
>AC024817-55|AAF59563.3| 366|Caenorhabditis elegans Hypothetical
protein Y54G2A.28 protein.
Length = 366
Score = 33.5 bits (73), Expect = 0.094
Identities = 18/43 (41%), Positives = 24/43 (55%)
Frame = -1
Query: 146 LFTPTMSCLTPRVKASKACSRV*PFLEIPASNSPVPAATMSTA 18
LF PT+SC+ + AS S P + PA N VP AT+S +
Sbjct: 13 LFDPTLSCMATQNSASATLSCANPTVAAPA-NDDVPEATLSVS 54
>Z99709-7|CAB16862.2| 500|Caenorhabditis elegans Hypothetical
protein C47B2.7b protein.
Length = 500
Score = 30.7 bits (66), Expect = 0.66
Identities = 41/145 (28%), Positives = 62/145 (42%)
Frame = +1
Query: 79 QTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPAAVAFV 258
QT EH LLA ++I+ +NK D E + + E K+V +K +G + +
Sbjct: 112 QTAEHLLLASKFCPNRVIIVLNKCDLAE----KSKISESAKKVRKGLKSMGVDENS---- 163
Query: 259 PISGWHGDNMLEPSTKMPWFKGWQVERKEGKADGKCLIEALDAILPPARPTDKPLRLPLQ 438
PI +E S +FK +E + K IE+ I P R + + +
Sbjct: 164 PI--------VEMSLADGYFK------EEMLQNLKLAIES--RIFEPKRDEEGEFLIAID 207
Query: 439 DVYKIGGIGTVPVGRVETGVLKPGT 513
+ I G GTV G V GVL+ T
Sbjct: 208 HCFAIKGQGTVLTGTVIRGVLRLNT 232
>AL008869-2|CAC42315.1| 810|Caenorhabditis elegans Hypothetical
protein H30A04.1b protein.
Length = 810
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 209 PHTSRRLATTQLLSLSCPFLD 271
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AL008869-1|CAA15516.1| 808|Caenorhabditis elegans Hypothetical
protein H30A04.1a protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 209 PHTSRRLATTQLLSLSCPFLD 271
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032749-1|BAA92158.1| 810|Caenorhabditis elegans EAT-20B protein.
Length = 810
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 209 PHTSRRLATTQLLSLSCPFLD 271
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>AB032748-1|BAA92157.1| 808|Caenorhabditis elegans EAT-20A protein.
Length = 808
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +2
Query: 209 PHTSRRLATTQLLSLSCPFLD 271
PH SR T L+ SCPFLD
Sbjct: 158 PHLSRNSFTANALNCSCPFLD 178
>Z70205-2|CAA94116.1| 529|Caenorhabditis elegans Hypothetical
protein C11H1.3 protein.
Length = 529
Score = 27.5 bits (58), Expect = 6.2
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = -1
Query: 518 TMVPGFNTPVSTLPTGTVPIPPILYTSCRGRRRGLSVGRAGGRM 387
++V G N + +PT T P+ P + +S R +R S G M
Sbjct: 332 SLVEGLNGSPTPIPTVTDPVNPTVNSSTRRKRHSSSKSSNGKSM 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.136 0.410
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,571,149
Number of Sequences: 27780
Number of extensions: 304567
Number of successful extensions: 782
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 772
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
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