Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329F10f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    24   1.1  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   1.4  
AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.    23   2.5  
AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.           22   3.3  
AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.           22   3.3  
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    22   3.3  
EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.    22   4.4  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    22   4.4  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     21   7.7  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   7.7  

>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 16/63 (25%), Positives = 24/63 (38%)
 Frame = +1

Query: 133 YPVLRRSR*RESLHGTVSHATSPRKQFAVVKHHGQRSWLAVCEAIFHGQKRIPINGLAFQ 312
           YP+LR        H  + H     +   +  H  Q SW    EA+  G   + + GL   
Sbjct: 70  YPLLRFEN--PETHHPIRHGRRQSRSMDLNAHREQMSWPVKKEAVVEGD--LVLGGLMMV 125

Query: 313 PQR 321
            +R
Sbjct: 126 HER 128



 Score = 22.6 bits (46), Expect = 2.5
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 355 NPVTGFREPNVNAVVEKRAR 296
           NPV GF E  +N  VE   R
Sbjct: 403 NPVKGFEEYFLNLTVENNRR 422


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = -3

Query: 99  PFSFPCTLRGTSFLMQDF 46
           P  FP  + GTS+ + D+
Sbjct: 654 PKEFPANIEGTSYFLNDY 671


>AB022907-1|BAA86908.1|  615|Apis mellifera glucose oxidase protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 19/69 (27%), Positives = 26/69 (37%)
 Frame = -3

Query: 363 FTVTLSPVFGNQMSTLWLKSEPVNWYPFLAVEDGFANSQPTTLPMMFNNCKLLPRTGGVR 184
           F V  SPV G     +     P   Y F+ V  G A +         +N K+L    G  
Sbjct: 44  FFVATSPVIGEPCQRVHSSRIPDLSYDFIVVGGGAARAVVAGRLSEVSNWKVLLLEAGPD 103

Query: 183 DSAV*ALPS 157
           + A   +PS
Sbjct: 104 EPAGAEIPS 112


>AY703618-1|AAU12614.1|  136|Apis mellifera wingless protein.
          Length = 136

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 23  SEGFYGNGKSCIKNDVPLRVHGKLNGV 103
           S+   GNG + + N     VHG   G+
Sbjct: 26  SDRVRGNGNAIVSNSASNSVHGHREGL 52


>AY222546-1|AAP69221.1|  135|Apis mellifera wingless protein.
          Length = 135

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +2

Query: 23  SEGFYGNGKSCIKNDVPLRVHGKLNGV 103
           S+   GNG + + N     VHG   G+
Sbjct: 27  SDRVRGNGNAIVSNSASNSVHGHREGL 53


>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 10/31 (32%), Positives = 18/31 (58%)
 Frame = -3

Query: 480 CSSKSPMSSLIPDKITGTEPRTSASKVIWSK 388
           CS +  + S++   I GTEPR+    ++ +K
Sbjct: 40  CSGQVCLGSVMQLPIHGTEPRSKEEILLHAK 70


>EF032397-1|ABM97933.1|  200|Apis mellifera arginine kinase protein.
          Length = 200

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 341 TGDRVTVNQEYLGHDVFDQI 400
           + D  ++ ++YL  DVFDQ+
Sbjct: 3   SSDSKSLLKKYLSKDVFDQL 22


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 8/20 (40%), Positives = 14/20 (70%)
 Frame = +2

Query: 341 TGDRVTVNQEYLGHDVFDQI 400
           + D  ++ ++YL  DVFDQ+
Sbjct: 19  SSDSKSLLKKYLSKDVFDQL 38


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +2

Query: 377 GHDVFDQITLDAD 415
           G  VFD++ LDAD
Sbjct: 394 GMKVFDELLLDAD 406


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/15 (60%), Positives = 10/15 (66%)
 Frame = -2

Query: 286  SVFGRGRWLRKQPAN 242
            S F RGR+   QPAN
Sbjct: 990  SPFKRGRYTPPQPAN 1004


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,294
Number of Sequences: 438
Number of extensions: 3637
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)