Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329F06f
         (521 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0501 + 17836948-17837373,17837857-17839184,17839270-178393...    27   6.9  
09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,353...    27   9.1  

>08_02_0501 + 17836948-17837373,17837857-17839184,17839270-17839380,
            17839719-17839998,17840275-17840396,17840451-17840556,
            17840814-17841020,17841130-17841255,17841719-17841817,
            17842265-17842456,17842555-17843073
          Length = 1171

 Score = 27.5 bits (58), Expect = 6.9
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 350  QILFVTCYFCFNEFINVIVSFTIFEFERNAIF 255
            +I  + CYF F    N+   FT+F FE +A+F
Sbjct: 931  RIAAMICYFFFK---NITFGFTLFWFEAHAMF 959


>09_02_0048 - 3532663-3533475,3534086-3534589,3534715-3535740,
            3536083-3536226,3536974-3537375,3537499-3537721,
            3537830-3542368,3542480-3542599,3543005-3543038,
            3543922-3544102,3544198-3544815,3545022-3551098,
            3551139-3551304,3551508-3551614,3552056-3552178,
            3553417-3553642
          Length = 5100

 Score = 27.1 bits (57), Expect = 9.1
 Identities = 18/51 (35%), Positives = 30/51 (58%)
 Frame = -1

Query: 227  TKTTNNKLIFSCLKIFTLQNSLIL*NWNTGKIQTVNFSLFFYYHAK*VTVL 75
            TK T+N++I  C   FT+Q S+ +  ++  K ++V   L  YY+ + VT L
Sbjct: 3347 TKFTDNRIIVKCTGSFTIQ-SVTMNVYDARKSKSVKV-LNLYYNNRPVTDL 3395


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,844,722
Number of Sequences: 37544
Number of extensions: 202770
Number of successful extensions: 328
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 328
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)