BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS329F05f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U35237-1|AAA79063.1| 264|Homo sapiens HNK-Tryptase-2 protein. 29 9.9
U26174-1|AAA74578.1| 264|Homo sapiens pre-granzyme 3 protein. 29 9.9
BC035802-1|AAH35802.1| 264|Homo sapiens granzyme K (granzyme 3;... 29 9.9
>U35237-1|AAA79063.1| 264|Homo sapiens HNK-Tryptase-2 protein.
Length = 264
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 279 TVILNTISLSQRKCTKQSFVSKSFLQPFFRVYTETQ 172
TV+L SLS+ + +KQ+ K F+ PF RV ++ Q
Sbjct: 79 TVVLGAHSLSKNEASKQTLEIKKFI-PFSRVTSDPQ 113
>U26174-1|AAA74578.1| 264|Homo sapiens pre-granzyme 3 protein.
Length = 264
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 279 TVILNTISLSQRKCTKQSFVSKSFLQPFFRVYTETQ 172
TV+L SLS+ + +KQ+ K F+ PF RV ++ Q
Sbjct: 79 TVVLGAHSLSKNEASKQTLEIKKFI-PFSRVTSDPQ 113
>BC035802-1|AAH35802.1| 264|Homo sapiens granzyme K (granzyme 3;
tryptase II) protein.
Length = 264
Score = 29.1 bits (62), Expect = 9.9
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 279 TVILNTISLSQRKCTKQSFVSKSFLQPFFRVYTETQ 172
TV+L SLS+ + +KQ+ K F+ PF RV ++ Q
Sbjct: 79 TVVLGAHSLSKNEASKQTLEIKKFI-PFSRVTSDPQ 113
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 66,046,855
Number of Sequences: 237096
Number of extensions: 1216772
Number of successful extensions: 6369
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6369
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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