Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329F04f
         (521 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR prot...    28   0.17 
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    25   2.0  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    23   8.2  

>AY391745-1|AAR28995.1|  460|Anopheles gambiae putative GPCR
           protein.
          Length = 460

 Score = 28.3 bits (60), Expect = 0.17
 Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
 Frame = +2

Query: 170 RLCNLVNSRFIS--GHNSTWFLKHLVLLWLHQFTFHRLSSLYYCHTSEYRSCDHSD*PNF 343
           +L  L +S +++  G + T +L  L + WL  F  H  +   YC    Y S   S    F
Sbjct: 68  KLKKLSSSYYLAALGISDTCYLVGLFVTWLSFFQVHIYTREPYCQLFTYTSGVSS----F 123

Query: 344 CSFLYIYQFTCFRF 385
            S  Y+  FT  RF
Sbjct: 124 LSVWYVVAFTFERF 137


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 16/60 (26%), Positives = 26/60 (43%)
 Frame = -2

Query: 241 DKVFEEPSRIVSADKATVDKVTEPKKVIQRNIEVEPKVKDAKVSVKDIPSRPSISEDPKK 62
           D+V  E  R+       +   T+P KV   N+ +EP      + +  I    SI  DP++
Sbjct: 363 DQVINETLRMYPPVPQLIRVTTQPYKVEGANVSLEPDTM-LMIPIYAIHHDASIYPDPER 421


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = +2

Query: 455 SLYIVYYRFRIYNFLSK 505
           SLY  Y RFR   +LSK
Sbjct: 442 SLYCSYNRFRYRRYLSK 458


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 401,358
Number of Sequences: 2352
Number of extensions: 7843
Number of successful extensions: 11
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)