Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329E12f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-3339|AAF56145.1|  540|Drosophila melanogaster CG10168-P...    31   0.95 
AF247761-1|AAF74192.1| 1671|Drosophila melanogaster kinesin supe...    29   5.1  
AE013599-2336|AAM70884.1| 1670|Drosophila melanogaster CG8566-PD...    29   5.1  

>AE014297-3339|AAF56145.1|  540|Drosophila melanogaster CG10168-PA
           protein.
          Length = 540

 Score = 31.1 bits (67), Expect = 0.95
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = -2

Query: 514 LRLSYXWLGASXRIYTRLYLASVSWTNILATFSYR 410
           +RL Y WL     ++  LYL      NIL  F YR
Sbjct: 1   MRLGYAWLAFGLLLHLNLYLELGQAANILGVFPYR 35


>AF247761-1|AAF74192.1| 1671|Drosophila melanogaster kinesin
           superfamily member DUnc104 protein.
          Length = 1671

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +2

Query: 38  IYPFHSRDITLARPYKNKCVIQ*---TTQSELAGVTARVSPSSLKYLASYKYWHHIRH 202
           + PF+SR+I  AR  ++KC+I+    TT      V    S S  ++   Y YW H  H
Sbjct: 10  VRPFNSREI--AR--ESKCIIEMAGATTAITNPKVPPNTSDSVKRFNFDYSYWSHDHH 63


>AE013599-2336|AAM70884.1| 1670|Drosophila melanogaster CG8566-PD
           protein.
          Length = 1670

 Score = 28.7 bits (61), Expect = 5.1
 Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +2

Query: 38  IYPFHSRDITLARPYKNKCVIQ*---TTQSELAGVTARVSPSSLKYLASYKYWHHIRH 202
           + PF+SR+I  AR  ++KC+I+    TT      V    S S  ++   Y YW H  H
Sbjct: 10  VRPFNSREI--AR--ESKCIIEMAGATTAITNPKVPPNTSDSVKRFNFDYSYWSHDHH 63


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,676,772
Number of Sequences: 53049
Number of extensions: 386917
Number of successful extensions: 652
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 642
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 652
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)