Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS329E11f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z34289-1|CAA84063.1| 699|Homo sapiens nucleolar phosphoprotein ... 84 3e-16
D21262-1|BAA04803.1| 707|Homo sapiens ORF protein. 84 3e-16
BC006769-1|AAH06769.1| 418|Homo sapiens NOLC1 protein protein. 84 3e-16
BC001883-1|AAH01883.1| 700|Homo sapiens nucleolar and coiled-bo... 84 3e-16
AY820769-1|AAV67777.1| 700|Homo sapiens HCV NS5A trans-regulate... 84 3e-16
AL500527-7|CAH72220.1| 699|Homo sapiens nucleolar and coiled-bo... 84 3e-16
M63978-1|AAA36804.1| 215|Homo sapiens vascular endothelial grow... 29 9.9
M27281-1|AAA36807.1| 215|Homo sapiens protein ( Human vascular ... 29 9.9
BC080607-1|AAH80607.1| 350|Homo sapiens TMEM185B protein protein. 29 9.9
AL136131-12|CAC19513.1| 215|Homo sapiens vascular endothelial g... 29 9.9
AK024632-1|BAB14938.1| 267|Homo sapiens protein ( Homo sapiens ... 29 9.9
AC012363-2|AAY14799.1| 350|Homo sapiens unknown protein. 29 9.9
>Z34289-1|CAA84063.1| 699|Homo sapiens nucleolar phosphoprotein
p130 protein.
Length = 699
Score = 83.8 bits (198), Expect = 3e-16
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +2
Query: 71 GARGSWGERANQDLKHTRGKSFKHEKTKKKRGSYRGGAIDTGVHSIKFE 217
GA G WGERANQ LK T+GKSF+HEKTKKKRGSYRGG+I V+SIKF+
Sbjct: 649 GAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSIKFD 697
>D21262-1|BAA04803.1| 707|Homo sapiens ORF protein.
Length = 707
Score = 83.8 bits (198), Expect = 3e-16
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +2
Query: 71 GARGSWGERANQDLKHTRGKSFKHEKTKKKRGSYRGGAIDTGVHSIKFE 217
GA G WGERANQ LK T+GKSF+HEKTKKKRGSYRGG+I V+SIKF+
Sbjct: 657 GAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSIKFD 705
>BC006769-1|AAH06769.1| 418|Homo sapiens NOLC1 protein protein.
Length = 418
Score = 83.8 bits (198), Expect = 3e-16
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +2
Query: 71 GARGSWGERANQDLKHTRGKSFKHEKTKKKRGSYRGGAIDTGVHSIKFE 217
GA G WGERANQ LK T+GKSF+HEKTKKKRGSYRGG+I V+SIKF+
Sbjct: 368 GAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSIKFD 416
>BC001883-1|AAH01883.1| 700|Homo sapiens nucleolar and coiled-body
phosphoprotein 1 protein.
Length = 700
Score = 83.8 bits (198), Expect = 3e-16
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +2
Query: 71 GARGSWGERANQDLKHTRGKSFKHEKTKKKRGSYRGGAIDTGVHSIKFE 217
GA G WGERANQ LK T+GKSF+HEKTKKKRGSYRGG+I V+SIKF+
Sbjct: 650 GAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSIKFD 698
>AY820769-1|AAV67777.1| 700|Homo sapiens HCV NS5A trans-regulated
protein 13 protein.
Length = 700
Score = 83.8 bits (198), Expect = 3e-16
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +2
Query: 71 GARGSWGERANQDLKHTRGKSFKHEKTKKKRGSYRGGAIDTGVHSIKFE 217
GA G WGERANQ LK T+GKSF+HEKTKKKRGSYRGG+I V+SIKF+
Sbjct: 650 GAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSIKFD 698
>AL500527-7|CAH72220.1| 699|Homo sapiens nucleolar and coiled-body
phosphoprotein 1 protein.
Length = 699
Score = 83.8 bits (198), Expect = 3e-16
Identities = 37/49 (75%), Positives = 42/49 (85%)
Frame = +2
Query: 71 GARGSWGERANQDLKHTRGKSFKHEKTKKKRGSYRGGAIDTGVHSIKFE 217
GA G WGERANQ LK T+GKSF+HEKTKKKRGSYRGG+I V+SIKF+
Sbjct: 649 GAAGDWGERANQVLKFTKGKSFRHEKTKKKRGSYRGGSISVQVNSIKFD 697
>M63978-1|AAA36804.1| 215|Homo sapiens vascular endothelial growth
factor protein.
Length = 215
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 92 ERANQDLKHTRGKSFKHEKTKKKRGSYRGGAIDTG 196
+RA Q+ K RGK K +K K+K+ Y+ ++ G
Sbjct: 135 DRARQEKKSVRGKG-KGQKRKRKKSRYKSWSVPCG 168
>M27281-1|AAA36807.1| 215|Homo sapiens protein ( Human vascular
permeability factor mRNA, complete cds. ).
Length = 215
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 92 ERANQDLKHTRGKSFKHEKTKKKRGSYRGGAIDTG 196
+RA Q+ K RGK K +K K+K+ Y+ ++ G
Sbjct: 135 DRARQEKKSVRGKG-KGQKRKRKKSRYKSWSVPCG 168
>BC080607-1|AAH80607.1| 350|Homo sapiens TMEM185B protein protein.
Length = 350
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 118 MFQILICSFTPRATSSTLLLIKHNFFILRIVISSC 14
MF++L+C R T LL+ FF+ + +++C
Sbjct: 96 MFEVLVCDRVERGTHFWLLVFMPLFFVSPVSVAAC 130
>AL136131-12|CAC19513.1| 215|Homo sapiens vascular endothelial
growth factor protein.
Length = 215
Score = 29.1 bits (62), Expect = 9.9
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 92 ERANQDLKHTRGKSFKHEKTKKKRGSYRGGAIDTG 196
+RA Q+ K RGK K +K K+K+ Y+ ++ G
Sbjct: 135 DRARQEKKSVRGKG-KGQKRKRKKSRYKSWSVPCG 168
>AK024632-1|BAB14938.1| 267|Homo sapiens protein ( Homo sapiens
cDNA: FLJ20979 fis, clone ADSU01938. ).
Length = 267
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 118 MFQILICSFTPRATSSTLLLIKHNFFILRIVISSC 14
MF++L+C R T LL+ FF+ + +++C
Sbjct: 13 MFEVLVCDRVERGTHFWLLVFMPLFFVSPVSVAAC 47
>AC012363-2|AAY14799.1| 350|Homo sapiens unknown protein.
Length = 350
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/35 (31%), Positives = 20/35 (57%)
Frame = -2
Query: 118 MFQILICSFTPRATSSTLLLIKHNFFILRIVISSC 14
MF++L+C R T LL+ FF+ + +++C
Sbjct: 96 MFEVLVCDRVERGTHFWLLVFMPLFFVSPVSVAAC 130
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,293,896
Number of Sequences: 237096
Number of extensions: 1360185
Number of successful extensions: 2047
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2005
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2047
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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