Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329E11f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-3627|AAF51789.2|  686|Drosophila melanogaster CG7421-PB...    96   3e-20
M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.         28   8.8  
AL009195-1|CAA15708.1| 3345|Drosophila melanogaster EG:30B8.4,FB...    28   8.8  
AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB ...    28   8.8  

>AE014296-3627|AAF51789.2|  686|Drosophila melanogaster CG7421-PB,
           isoform B protein.
          Length = 686

 Score = 95.9 bits (228), Expect = 3e-20
 Identities = 42/48 (87%), Positives = 45/48 (93%)
 Frame = +2

Query: 74  ARGSWGERANQDLKHTRGKSFKHEKTKKKRGSYRGGAIDTGVHSIKFE 217
           A GSWGERAN+DLKHTRGKSFKHEKTKKKRGSYRGG ID GV+SIKF+
Sbjct: 639 AAGSWGERANKDLKHTRGKSFKHEKTKKKRGSYRGGQIDVGVNSIKFD 686


>M74329-1|AAA28747.1| 2483|Drosophila melanogaster pcx protein.
          Length = 2483

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +2

Query: 68  GGARGSWGERANQDLK-HTRGKSFKHEKTKKKRGSYRGGAIDTG 196
           GGA G  G  A    + H+   S+KH  ++  + S  GG    G
Sbjct: 86  GGAAGGGGSAAGMKRRRHSNATSYKHGSSQSNKSSLVGGGGSRG 129


>AL009195-1|CAA15708.1| 3345|Drosophila melanogaster
           EG:30B8.4,FBgn0003048;pcx protein.
          Length = 3345

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +2

Query: 68  GGARGSWGERANQDLK-HTRGKSFKHEKTKKKRGSYRGGAIDTG 196
           GGA G  G  A    + H+   S+KH  ++  + S  GG    G
Sbjct: 539 GGAAGGGGSAAGMKRRRHSNATSYKHGSSQSNKSSLVGGGGSRG 582


>AE014298-365|AAF45756.2| 3433|Drosophila melanogaster CG3443-PB
           protein.
          Length = 3433

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/44 (31%), Positives = 20/44 (45%), Gaps = 1/44 (2%)
 Frame = +2

Query: 68  GGARGSWGERANQDLK-HTRGKSFKHEKTKKKRGSYRGGAIDTG 196
           GGA G  G  A    + H+   S+KH  ++  + S  GG    G
Sbjct: 550 GGAAGGGGSAAGMKRRRHSNATSYKHGSSQSNKSSLVGGGGSRG 593


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,139,515
Number of Sequences: 53049
Number of extensions: 432803
Number of successful extensions: 845
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 833
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 845
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)