Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329E10f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97549-9|AAB52849.2|  472|Caenorhabditis elegans Hypothetical pr...    30   0.87 
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z69361-3|CAA93289.1|  533|Caenorhabditis elegans Hypothetical pr...    28   3.5  
Z68882-20|CAA93112.1|  533|Caenorhabditis elegans Hypothetical p...    28   3.5  
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein...    28   3.5  
AL132904-14|CAC35847.2|  258|Caenorhabditis elegans Hypothetical...    28   3.5  
AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical ...    28   3.5  
AF242767-1|AAG36874.1|  258|Caenorhabditis elegans SF2 protein.        28   3.5  
AF067215-1|AAC17011.1|  495|Caenorhabditis elegans Hypothetical ...    28   4.7  
AF003137-8|AAB93645.3|  494|Caenorhabditis elegans Hypothetical ...    28   4.7  
Z79603-7|CAB01896.1|  259|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AF125442-7|AAD12796.1|  203|Caenorhabditis elegans Hypothetical ...    27   6.2  
AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical ...    27   6.2  

>U97549-9|AAB52849.2|  472|Caenorhabditis elegans Hypothetical
           protein F15A8.7 protein.
          Length = 472

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 12/41 (29%), Positives = 23/41 (56%)
 Frame = -1

Query: 260 AYSRSTHPGYGQSDSAKLHQVIFYSRRQQTVLWEAETPENP 138
           A+S + H  +  S+  +LH+ IF+     ++  +A+ P NP
Sbjct: 428 AHSATEHGAHNHSEHHQLHRSIFHHGAPTSIRSQAQVPHNP 468


>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
            C10C6.1 protein.
          Length = 1565

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 329  SQSSDTSGSAADPVRDTCWCMY 264
            S SS  S  +A+P R+TC+ MY
Sbjct: 1089 SISSSQSSQSAEPARETCYVMY 1110


>Z69361-3|CAA93289.1|  533|Caenorhabditis elegans Hypothetical
           protein T13H10.1 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 11/52 (21%), Positives = 26/52 (50%)
 Frame = +2

Query: 296 LLHCLMYQMIENCPEESLRKDDVCSPVSSLSGFNYMFSQSMYEDLEEHLPVE 451
           ++  + Y++     EE +   +    + +L GF+     + Y +L +H+P+E
Sbjct: 350 IVRFITYRICAGAEEERVTMSEAVRELLTLEGFDQAPGSNSYFELPDHIPME 401


>Z68882-20|CAA93112.1|  533|Caenorhabditis elegans Hypothetical
           protein T13H10.1 protein.
          Length = 533

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 11/52 (21%), Positives = 26/52 (50%)
 Frame = +2

Query: 296 LLHCLMYQMIENCPEESLRKDDVCSPVSSLSGFNYMFSQSMYEDLEEHLPVE 451
           ++  + Y++     EE +   +    + +L GF+     + Y +L +H+P+E
Sbjct: 350 IVRFITYRICAGAEEERVTMSEAVRELLTLEGFDQAPGSNSYFELPDHIPME 401


>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
            protein.
          Length = 1565

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 11/22 (50%), Positives = 15/22 (68%)
 Frame = -1

Query: 329  SQSSDTSGSAADPVRDTCWCMY 264
            S SS  S  +A+P R+TC+ MY
Sbjct: 1089 SISSSQSSQSAEPARETCYVMY 1110


>AL132904-14|CAC35847.2|  258|Caenorhabditis elegans Hypothetical
           protein Y111B2A.18 protein.
          Length = 258

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = +2

Query: 179 VVLSRILPDGAWRNLTDHIL---DVCYENRPRTYT 274
           V++  + P G+W++L DH+    DVCY +  R  T
Sbjct: 125 VIVEGLPPTGSWQDLKDHMRDAGDVCYADVARDGT 159


>AL034393-1|CAA22308.1| 1634|Caenorhabditis elegans Hypothetical
           protein Y18D10A.1 protein.
          Length = 1634

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = -1

Query: 341 LPDNSQSSDTSGSAADPVRD 282
           LP +SQ+  TSGSAA PV D
Sbjct: 823 LPTSSQTPPTSGSAAPPVDD 842


>AF242767-1|AAG36874.1|  258|Caenorhabditis elegans SF2 protein.
          Length = 258

 Score = 28.3 bits (60), Expect = 3.5
 Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
 Frame = +2

Query: 179 VVLSRILPDGAWRNLTDHIL---DVCYENRPRTYT 274
           V++  + P G+W++L DH+    DVCY +  R  T
Sbjct: 125 VIVEGLPPTGSWQDLKDHMRDAGDVCYADVARDGT 159


>AF067215-1|AAC17011.1|  495|Caenorhabditis elegans Hypothetical
           protein ZK380.2 protein.
          Length = 495

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 18/63 (28%), Positives = 35/63 (55%)
 Frame = +2

Query: 305 CLMYQMIENCPEESLRKDDVCSPVSSLSGFNYMFSQSMYEDLEEHLPVEIRPEWFLRNYF 484
           C+ +Q  E+  +  L      S V SL+   YMFS++ YE L+    ++++P   L +Y+
Sbjct: 382 CINHQFSEHIEKLKLEHK---SYVESLNDLKYMFSEAQYELLDS---LDVKPR-ALCDYY 434

Query: 485 KSK 493
           +++
Sbjct: 435 RAR 437


>AF003137-8|AAB93645.3|  494|Caenorhabditis elegans Hypothetical
           protein C27A12.8 protein.
          Length = 494

 Score = 27.9 bits (59), Expect = 4.7
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 387 LDSITCSHKVCTKIWRSIYLLKFVLN 464
           L  ++C+H+ CT+ W++ YL   + N
Sbjct: 137 LSGLSCNHRACTQCWKA-YLTNKIAN 161


>Z79603-7|CAB01896.1|  259|Caenorhabditis elegans Hypothetical
           protein M163.7 protein.
          Length = 259

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
 Frame = +2

Query: 359 DVCSPVSSLSGFNYMF--SQSMYED--LEEHLPVEIRPEWFL 472
           D C P   + GF Y F  S+++  +  L EH  +++   W+L
Sbjct: 81  DFCLPEDEMGGFQYFFLHSETVVSNSKLTEHSRIKVELSWWL 122


>AF125442-7|AAD12796.1|  203|Caenorhabditis elegans Hypothetical
           protein H04M03.11 protein.
          Length = 203

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/40 (30%), Positives = 20/40 (50%)
 Frame = +3

Query: 348 CVKMTSVHPCRHFLDSITCSHKVCTKIWRSIYLLKFVLNG 467
           C  + S H C HF   +  +H+   +  +S Y L ++L G
Sbjct: 23  CQTVPSGHACEHFCSVLKTAHENYNR--KSSYFLHYILGG 60


>AF014939-4|AAB63932.1| 1277|Caenorhabditis elegans Hypothetical
           protein ZC132.5 protein.
          Length = 1277

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -3

Query: 246 HTSRIWSVRFRQAPSGNILLKTTADCSLGGRDS 148
           H + IW   F Q PSG +L+KT    +  G+++
Sbjct: 35  HIAEIWRGDFIQLPSGILLIKTVFGYTTMGKNT 67


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,556,530
Number of Sequences: 27780
Number of extensions: 312310
Number of successful extensions: 834
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)