Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329E09f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   2.5  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   2.5  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      22   4.4  
DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2 pr...    21   7.7  
DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1 pr...    21   7.7  
AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-ri...    21   7.7  
AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.    21   7.7  
AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.         21   7.7  

>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 446 KWLPEPIDIYIIYNVNAATHLE 381
           +W+ EP D+ +  N + A H +
Sbjct: 711 RWIVEPTDVSVERNKHVALHCQ 732


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
           AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = -1

Query: 446 KWLPEPIDIYIIYNVNAATHLE 381
           +W+ EP D+ +  N + A H +
Sbjct: 707 RWIVEPTDVSVERNKHVALHCQ 728


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = -2

Query: 232 NFQFETISKLSPMKPNINVTDLTTAIDNAVAPEHRVKVLQSLS 104
           N+Q    S    ++ + +  D+T A D      HRV VL + S
Sbjct: 13  NYQSSITSAFENLRDDEDFVDVTLACDGRSLKAHRV-VLSACS 54


>DQ485319-1|ABF21078.1|  175|Apis mellifera icarapin variant 2
           precursor protein.
          Length = 175

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 81  ITRDNSSIDSDCNTLTLCSGATALSMAVVRSVTFIFGF 194
           +T  +S  DSD  TL    G    S    RSV  +  F
Sbjct: 124 LTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDF 161


>DQ485318-1|ABF21077.1|  223|Apis mellifera icarapin variant 1
           precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 81  ITRDNSSIDSDCNTLTLCSGATALSMAVVRSVTFIFGF 194
           +T  +S  DSD  TL    G    S    RSV  +  F
Sbjct: 172 LTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDF 209


>AY939856-1|AAX33236.1|  223|Apis mellifera venom carbohydrate-rich
           protein precursor protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 81  ITRDNSSIDSDCNTLTLCSGATALSMAVVRSVTFIFGF 194
           +T  +S  DSD  TL    G    S    RSV  +  F
Sbjct: 172 LTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDF 209


>AY897570-1|AAW81036.1|  223|Apis mellifera venom protein 2 protein.
          Length = 223

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 13/38 (34%), Positives = 16/38 (42%)
 Frame = +3

Query: 81  ITRDNSSIDSDCNTLTLCSGATALSMAVVRSVTFIFGF 194
           +T  +S  DSD  TL    G    S    RSV  +  F
Sbjct: 172 LTTVSSEADSDVTTLPTLIGKNETSTQSSRSVESVEDF 209


>AY588474-1|AAT94401.1|  104|Apis mellifera defensin 2 protein.
          Length = 104

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = -3

Query: 150 TQWLRSTESKCCSRCL 103
           ++WL    S C  RCL
Sbjct: 71  SKWLSINHSACAIRCL 86


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,653
Number of Sequences: 438
Number of extensions: 2511
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)