Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS329D07f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132860-6|CAB60526.1| 373|Caenorhabditis elegans Hypothetical ... 32 0.22
AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome re... 31 0.66
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 29 2.0
Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical pr... 28 3.5
AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein. 28 3.5
Z99772-1|CAB16921.1| 794|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z75550-14|CAA99932.1| 794|Caenorhabditis elegans Hypothetical p... 28 4.7
U80843-4|AAB37964.1| 470|Caenorhabditis elegans Hypothetical pr... 27 6.2
U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical pr... 27 6.2
U40942-3|AAU05564.1| 487|Caenorhabditis elegans Hypothetical pr... 27 6.2
AF047658-5|AAC04416.3| 434|Caenorhabditis elegans Hypothetical ... 27 6.2
Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical pr... 27 8.1
U23519-4|AAK31501.1| 358|Caenorhabditis elegans Toxin-regulated... 24 9.3
>AL132860-6|CAB60526.1| 373|Caenorhabditis elegans Hypothetical
protein Y56A3A.9 protein.
Length = 373
Score = 32.3 bits (70), Expect = 0.22
Identities = 23/74 (31%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Frame = +1
Query: 136 QPDPTGLPGAKLP--DPYPVPDVKQSLTLGTMNFKNIALYGTNEFRLNYVKAD-IGAMEA 306
QP P LPG + P P P+P + L + ++ I + TNE RL + D + M
Sbjct: 27 QPPPQDLPGLQDPPLTPLPLPPLLCPHPLSLLTWEGIQIPTTNECRLLGLHFDSMLCMRE 86
Query: 307 HAVMTLEKLQARGN 348
H ++LQ++ N
Sbjct: 87 HHAQIKKRLQSQLN 100
>AF039052-4|AAF98630.1| 981|Caenorhabditis elegans Proteasome
regulatory particle,non-atpase-like protein 1 protein.
Length = 981
Score = 30.7 bits (66), Expect = 0.66
Identities = 10/38 (26%), Positives = 25/38 (65%)
Frame = +1
Query: 37 QEIPEEVSSEDEKLSEGEKKLSHNILAILEHYKQPDPT 150
+++PE+ + E++SE ++KL ++ +++ +PD T
Sbjct: 20 KKVPEKAEPKKEEMSEEDQKLEEDLNLLVQRLSEPDTT 57
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 29.1 bits (62), Expect = 2.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 73 KLSEGEKKLSHNILAILEHYKQPDPTGLPGAKLPDPYPVPDVK 201
K S+GEKK+ N + + P P P + P+P P P V+
Sbjct: 2795 KNSKGEKKVKENTAPVQQ---APVPVSPPREETPEPTPSPPVR 2834
>Z92837-1|CAB07400.1| 1043|Caenorhabditis elegans Hypothetical
protein R03E1.1 protein.
Length = 1043
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 43 IPEEVSSEDEKLSEGEKKLSHNILAILEHYKQPDPTGLPGAKLPDP 180
+P + S +S + L+H +A + P P P KLPDP
Sbjct: 235 VPPPIPSRAPVMSPVQSPLTHPPVAPMPRCPPPLPPRTPSMKLPDP 280
>AY372076-1|AAQ75758.1| 1043|Caenorhabditis elegans SYM-4 protein.
Length = 1043
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +1
Query: 43 IPEEVSSEDEKLSEGEKKLSHNILAILEHYKQPDPTGLPGAKLPDP 180
+P + S +S + L+H +A + P P P KLPDP
Sbjct: 235 VPPPIPSRAPVMSPVQSPLTHPPVAPMPRCPPPLPPRTPSMKLPDP 280
>Z99772-1|CAB16921.1| 794|Caenorhabditis elegans Hypothetical
protein H05L14.1 protein.
Length = 794
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +1
Query: 79 SEGEKKLSHNILAILEHYKQPDPTGLPGAKLPDPYPVPD-VKQSLTLGTMN 228
S +K L+ + P G P A P P PV D K+ T+ TM+
Sbjct: 16 SNRKKNLTKELSREASRMGAPSQMGAPSAVTPIPVPVSDPTKKGTTMSTMS 66
>Z75550-14|CAA99932.1| 794|Caenorhabditis elegans Hypothetical
protein H05L14.1 protein.
Length = 794
Score = 27.9 bits (59), Expect = 4.7
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +1
Query: 79 SEGEKKLSHNILAILEHYKQPDPTGLPGAKLPDPYPVPD-VKQSLTLGTMN 228
S +K L+ + P G P A P P PV D K+ T+ TM+
Sbjct: 16 SNRKKNLTKELSREASRMGAPSQMGAPSAVTPIPVPVSDPTKKGTTMSTMS 66
>U80843-4|AAB37964.1| 470|Caenorhabditis elegans Hypothetical
protein C32B5.9 protein.
Length = 470
Score = 27.5 bits (58), Expect = 6.2
Identities = 24/84 (28%), Positives = 38/84 (45%)
Frame = +1
Query: 262 FRLNYVKADIGAMEAHAVMTLEKLQARGNYTFATWFNSVRGPFTVHITGLRVTANAGLQV 441
F L+ + + E + L+ L+ GN + NS+R V+ G R++ L V
Sbjct: 173 FHLSQQYPSLLSTERSVPLRLDSLKLGGN---SDSVNSIRCELAVYRHGGRLSKKFKLDV 229
Query: 442 ERDGKIRAENIVMDLSASNIAVNL 513
DGK+ NIV+ I V+L
Sbjct: 230 TEDGKVDM-NIVVVEGLGEILVDL 252
>U40942-4|AAC47069.2| 486|Caenorhabditis elegans Hypothetical
protein K02E10.4a protein.
Length = 486
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 354 GVVAACLQFFESHHGVGLHCSDIGLNVI 271
G+ C Q S G +HC+D+GL I
Sbjct: 163 GLPMKCSQIARSCPGENMHCADVGLGYI 190
>U40942-3|AAU05564.1| 487|Caenorhabditis elegans Hypothetical
protein K02E10.4b protein.
Length = 487
Score = 27.5 bits (58), Expect = 6.2
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 354 GVVAACLQFFESHHGVGLHCSDIGLNVI 271
G+ C Q S G +HC+D+GL I
Sbjct: 164 GLPMKCSQIARSCPGENMHCADVGLGYI 191
>AF047658-5|AAC04416.3| 434|Caenorhabditis elegans Hypothetical
protein K03H6.5 protein.
Length = 434
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +1
Query: 7 LVILFQFRNCQEIPEEVSSEDEKLSEGEKKLSHNILAIL 123
L+ L + R+ +E+ ++ ++E EKK++H +LAI+
Sbjct: 246 LIRLVKRRHSEELLVRNAAGPSSMAEQEKKMTHTVLAIV 284
>Z81552-3|CAB04486.1| 470|Caenorhabditis elegans Hypothetical
protein F56G4.4 protein.
Length = 470
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 37 QEIPEEVSSEDEKLSEGEKKLSHNILAILEHYKQPDPTGLPGAKLPDPYPVPDV 198
+++ +E S EDE+ E L + EH P P L +L +P +P++
Sbjct: 321 EDVSDEESDEDEEEFEIIGTPEREALVLREHSSTPPPEELQ-EQLEEPPKIPEI 373
>U23519-4|AAK31501.1| 358|Caenorhabditis elegans Toxin-regulated
target of p38mapkprotein 2 protein.
Length = 358
Score = 23.8 bits (49), Expect(2) = 9.3
Identities = 19/72 (26%), Positives = 31/72 (43%), Gaps = 1/72 (1%)
Frame = +1
Query: 199 KQSLTLGTMNF-KNIALYGTNEFRLNYVKADIGAMEAHAVMTLEKLQARGNYTFATWFNS 375
KQSL +N + I+ N ++ VK D + + + K+ Y+F FN
Sbjct: 226 KQSLKYVHLNIVRRISALNQNNEVIDTVKIDTTGV---GLPSKTKIAVGETYSFRPTFNV 282
Query: 376 VRGPFTVHITGL 411
P +H+ GL
Sbjct: 283 PALPPNIHVNGL 294
Score = 21.4 bits (43), Expect(2) = 9.3
Identities = 8/18 (44%), Positives = 15/18 (83%)
Frame = +1
Query: 457 IRAENIVMDLSASNIAVN 510
++ E+I++D+SASN +N
Sbjct: 333 MQKEDILVDISASNNTLN 350
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.317 0.134 0.385
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,478,571
Number of Sequences: 27780
Number of extensions: 234793
Number of successful extensions: 733
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 677
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 732
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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