Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS329C06f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_07_0063 - 12502305-12503361,12503567-12503668,12504251-125043... 33 0.14
07_01_0769 + 5908942-5908946,5909085-5909666,5910370-5910429,591... 33 0.18
08_02_0672 - 19904353-19904839,19905646-19905704,19906137-199063... 31 0.42
04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355 31 0.42
07_03_1482 - 26864793-26865043,26865325-26865454,26865564-268657... 31 0.74
10_08_0106 + 14842748-14843085,14843122-14843250,14844145-148442... 30 0.98
11_01_0389 - 2937242-2939476,2939556-2939666,2941254-2941450,294... 30 1.3
08_02_0168 - 13640894-13641973 30 1.3
05_03_0235 - 10747649-10748118,10748226-10748314,10748477-107485... 30 1.3
03_03_0114 - 14554964-14555136,14556317-14556474,14557413-145574... 30 1.3
01_05_0147 + 18597194-18597643,18598347-18598681,18600073-186001... 30 1.3
12_02_1280 - 27517683-27517871,27517955-27518029,27518155-275183... 29 2.3
06_01_0318 - 2284481-2284594,2285340-2286044,2286589-2286609,228... 29 2.3
04_04_1377 - 33064906-33065607 29 2.3
10_01_0076 - 987092-987671,987747-987812,988201-988363,988467-98... 29 3.0
02_05_0096 + 25785995-25786311,25786716-25786776,25787825-257880... 29 3.0
02_01_0473 - 3403547-3404241,3404455-3404983,3405299-3405477,340... 29 3.0
08_02_0707 - 20212190-20214592 28 4.0
06_03_1499 + 30593336-30593750,30594352-30595343 28 4.0
11_04_0314 - 16277292-16277927,16278385-16278514,16278934-162792... 28 5.2
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 28 5.2
02_02_0284 - 8547126-8547187,8547306-8547395,8547810-8547861,854... 28 5.2
12_01_0407 - 3219980-3221278 27 9.1
10_03_0002 - 6858257-6861205 27 9.1
07_01_0070 + 515247-515397,516198-516265,516360-518456,518750-51... 27 9.1
06_03_1282 - 28946363-28946533,28947234-28947272,28947399-289475... 27 9.1
04_04_0318 + 24347364-24348826,24348920-24349048,24349158-243492... 27 9.1
03_01_0520 - 3900387-3900613,3900812-3900853,3902092-3902210,390... 27 9.1
>10_07_0063 -
12502305-12503361,12503567-12503668,12504251-12504378,
12504653-12504764,12504876-12504927,12505260-12505517,
12505943-12506079,12506296-12506606
Length = 718
Score = 33.1 bits (72), Expect = 0.14
Identities = 21/94 (22%), Positives = 37/94 (39%), Gaps = 1/94 (1%)
Frame = +1
Query: 121 NQWSRTPSEAQSTKSPEHLPHVVHVQSVRVRDAGAGRHIRSHERE-HVHVFLDLQQFAGG 297
N W T + P P ++ + G+G H +RE H + Q +
Sbjct: 577 NNWGSTDHD-----KPAFQPFTQKAKTYQHGSNGSGHHQARVDRETHQPLRSRNQDYHWE 631
Query: 298 PRQRQHEEHHHNNAYCQRKKDHNQESHRERTRDN 399
+ H+++HH N Y R+ +Q H++ N
Sbjct: 632 DQSYHHQQNHHQNYYGHRQMSQDQYHHQQNHHQN 665
>07_01_0769 +
5908942-5908946,5909085-5909666,5910370-5910429,
5910635-5910674,5910767-5910860,5911582-5911952
Length = 383
Score = 32.7 bits (71), Expect = 0.18
Identities = 20/87 (22%), Positives = 36/87 (41%), Gaps = 3/87 (3%)
Frame = +1
Query: 151 QSTKSPEHLPHVVHVQSVRVRDAGAGR---HIRSHEREHVHVFLDLQQFAGGPRQRQHEE 321
Q K + H + + R G G+ H R ER H H D ++ ++R H+
Sbjct: 50 QKVKVDDREQHWCEERGEKRRRVGHGQQRSHQRDQERSHQH---DQERSVERDQERSHQR 106
Query: 322 HHHNNAYCQRKKDHNQESHRERTRDNN 402
+ +++ H ++ HR RD +
Sbjct: 107 DQEGSVERDQERSHQRDRHRSVKRDQH 133
>08_02_0672 -
19904353-19904839,19905646-19905704,19906137-19906352,
19906845-19907422,19907506-19908180,19908263-19908653,
19909469-19909621,19909727-19909980,19911023-19911479
Length = 1089
Score = 31.5 bits (68), Expect = 0.42
Identities = 23/92 (25%), Positives = 41/92 (44%)
Frame = +1
Query: 142 SEAQSTKSPEHLPHVVHVQSVRVRDAGAGRHIRSHEREHVHVFLDLQQFAGGPRQRQHEE 321
+E T SP+ + R +D RH R ERE V + + +R ++E
Sbjct: 436 TERIETGSPDKRKERERDKEKRDKDKELERHERERERERVRRDRE-KDIKYKEVERLYKE 494
Query: 322 HHHNNAYCQRKKDHNQESHRERTRDNNVLRKR 417
+ +R+K++ ++ +ER +D RKR
Sbjct: 495 RLKEWEFREREKEYQRQHEKEREKDRERERKR 526
>04_04_1150 + 31278367-31278885,31280065-31281278,31281759-31283355
Length = 1109
Score = 31.5 bits (68), Expect = 0.42
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +1
Query: 304 QRQHEEHHHNNAYCQRKKDHNQESHR--ERTRDNNVLR 411
QR H HHH+ QR H+Q R RTRD V R
Sbjct: 135 QRHHHRHHHHQR--QRHHHHHQRQQRRGSRTRDPRVRR 170
>07_03_1482 -
26864793-26865043,26865325-26865454,26865564-26865771,
26867529-26867599,26867875-26867884,26869562-26870310
Length = 472
Score = 30.7 bits (66), Expect = 0.74
Identities = 13/20 (65%), Positives = 13/20 (65%)
Frame = -2
Query: 220 LHPEPERIEHGRREGGARVT 161
LHP P R HG EG ARVT
Sbjct: 12 LHPRPRRRRHGGAEGKARVT 31
>10_08_0106 +
14842748-14843085,14843122-14843250,14844145-14844211,
14847177-14847324,14847998-14848097,14848306-14848384,
14848527-14848687,14848829-14848908,14849319-14849475,
14849575-14849723,14849909-14850076,14850426-14850719,
14851002-14851046,14851213-14851462,14851707-14851835,
14852799-14853039,14853977-14854642
Length = 1066
Score = 30.3 bits (65), Expect = 0.98
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +1
Query: 274 DLQQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESHRERTRDNNVLRKR 417
++++F R+R H +R+++ +E RER RD + R R
Sbjct: 758 EMERFNERERERGHSRERERERERERERERERERERERERDRDQNRDR 805
Score = 29.1 bits (62), Expect = 2.3
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +1
Query: 211 RDAGAGRHIRSHEREHVHVFLDLQQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESHRERT 390
RD R + R + F + ++ G R+R+ E +R+++ +E RER
Sbjct: 743 RDEFELRKPDNRRRREMERFNERERERGHSRERERERERER----ERERERERERERERD 798
Query: 391 RDNNVLRKR 417
RD N R R
Sbjct: 799 RDQNRDRDR 807
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/42 (28%), Positives = 21/42 (50%)
Frame = +1
Query: 301 RQRQHEEHHHNNAYCQRKKDHNQESHRERTRDNNVLRKRGSK 426
R+R+ E + R +D +QE R+R RD +R ++
Sbjct: 787 RERERERERERDRDQNRDRDRDQERDRDRERDRERESRREAR 828
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/60 (28%), Positives = 25/60 (41%)
Frame = +1
Query: 208 VRDAGAGRHIRSHEREHVHVFLDLQQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESHRER 387
V + GRH R H RE + ++ A G + EE + K+ + S RER
Sbjct: 970 VAEDNDGRHHRRHHREAAAAAEERRRPAAGDYYGEEEEDDESEEEQHFKRRPSSSSRRER 1029
>11_01_0389 -
2937242-2939476,2939556-2939666,2941254-2941450,
2941543-2941633
Length = 877
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 280 QQFAGGPRQRQHEEHHHN-NAYCQRKKDHNQESHRERTRDNNVLRKR 417
QQ A G R +E+H + N +RK +H E + RD + RKR
Sbjct: 660 QQAAVGQRAANNEDHLNGCNDASKRKDNHQSEGNNLSHRDEDPTRKR 706
>08_02_0168 - 13640894-13641973
Length = 359
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 247 EREHVHVFLDLQQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESH 378
E + V+ F D+Q+ +GG + R H + + N+ KK +Q H
Sbjct: 217 EMQQVYTF-DMQKSSGGDQTRNHGDKNSNSGGPVHKKSSSQRHH 259
>05_03_0235 -
10747649-10748118,10748226-10748314,10748477-10748574,
10748934-10749046,10749107-10749200,10749557-10749589,
10749734-10749851,10750110-10750210,10751036-10751233,
10751337-10751471,10751752-10751830,10753650-10753738,
10753835-10753987,10754100-10754285
Length = 651
Score = 29.9 bits (64), Expect = 1.3
Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 1/59 (1%)
Frame = +1
Query: 229 RHIRSHEREHVHVFLD-LQQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESHRERTRDNN 402
RH H H H D + GG QR+ HHH A+ H+++ H N+
Sbjct: 537 RHHHDHRHRHGHSHGDHHHHYHGGHHQRR--RHHHPPAWDVEGHHHDRQQHSHEAGRNH 593
>03_03_0114 -
14554964-14555136,14556317-14556474,14557413-14557486,
14557589-14557703,14557818-14558054,14558157-14558233
Length = 277
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +1
Query: 352 KKDHNQESHRERTRDNNVLRKRGSKVKDCQWSTSIANVQL 471
K++ +Q D+ +RK+ S+ QW+T IA VQL
Sbjct: 126 KEEKDQVDELYTVPDHLKVRKKNSEESSTQWTTGIAEVQL 165
>01_05_0147 +
18597194-18597643,18598347-18598681,18600073-18600147,
18600325-18600427,18601554-18601642,18602953-18603064,
18604093-18604146,18604271-18604319,18606236-18606347,
18606389-18606436,18607000-18607327
Length = 584
Score = 29.9 bits (64), Expect = 1.3
Identities = 14/55 (25%), Positives = 23/55 (41%)
Frame = +1
Query: 289 AGGPRQRQHEEHHHNNAYCQRKKDHNQESHRERTRDNNVLRKRGSKVKDCQWSTS 453
A +R HH ++ +R +D + E R R R + +RG + S S
Sbjct: 67 ASSSSRRHRHHHHKSSGRSRRSRDDDDERRRRRRRRDEERGRRGGDASESSGSGS 121
>12_02_1280 -
27517683-27517871,27517955-27518029,27518155-27518318,
27518424-27518538,27518783-27519074,27519162-27519318,
27519438-27519510,27520309-27520377,27520471-27520694,
27520800-27520981,27521067-27522064,27522335-27522580
Length = 927
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Frame = +1
Query: 211 RDAGAGRHI---RSHEREHVHVFLDLQQFAGGPRQR-QHEEHHHNNAYCQRKKDHNQESH 378
R++ GRH R +E E + ++ A R+R +HE H +N + K D ++ +H
Sbjct: 220 RNSKHGRHATRSRDNETERSSSYA-VRDEAYDERERYKHERRHRSNPVDRDKVDLHELTH 278
Query: 379 RERTRDNN 402
R+R R ++
Sbjct: 279 RDRERSSS 286
>06_01_0318 -
2284481-2284594,2285340-2286044,2286589-2286609,
2287186-2287257,2287762-2287842,2288059-2288133,
2288197-2288484
Length = 451
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = +1
Query: 211 RDAGAGRHIRSHEREHVHVFLDLQQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESHRERT 390
R + R RSHER+H + G + R+H+ H + R +D+ + S+ R
Sbjct: 276 RSSPRRRRSRSHERDHDSERDRSDRDRGRHKDREHDRHARED----RDRDYRRSSYSSRN 331
Query: 391 RDNNVLRKR 417
D +R
Sbjct: 332 VDRQGRERR 340
>04_04_1377 - 33064906-33065607
Length = 233
Score = 29.1 bits (62), Expect = 2.3
Identities = 11/33 (33%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +1
Query: 301 RQRQHEEHHHNNAYCQ---RKKDHNQESHRERT 390
RQ+ H HHH++ + Q ++ H+ E +RT
Sbjct: 178 RQKHHHHHHHHHPHLQPHGEEQHHHHEQKHQRT 210
>10_01_0076 -
987092-987671,987747-987812,988201-988363,988467-988548,
989153-989202,989237-989270,990177-990239,990339-990403,
990485-990560,991274-991353,991514-991628,991729-991830
Length = 491
Score = 28.7 bits (61), Expect = 3.0
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Frame = +1
Query: 205 RVRDAGAGRHIRSHEREHVHVFLDLQQFAGG-PRQRQ-----HEEHHHNNAY-CQRKKDH 363
R RD SHER+ H+ +FA G P+ Q +E+H ++AY +R K H
Sbjct: 393 RGRDRERDYERASHERDRGHMHERDAEFANGEPKHDQEYGYNYEQHKSHDAYETERSKRH 452
Query: 364 NQESHR 381
E ++
Sbjct: 453 EHEYYQ 458
Score = 27.1 bits (57), Expect = 9.1
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +1
Query: 196 QSVRVRDAGAGRHIRSHE--REHVHVFLDLQQFAGGPRQRQHEEHHHNNAYCQ-RKKDHN 366
Q + RD RS E R+ D ++ PR+R +E ++ + R++D
Sbjct: 272 QKLSTRDQQHAGRPRSEEPRRDERRADRDREKSRERPRERDRDERTRERSHDRTRERDSK 331
Query: 367 QESH----RERTRDNNVLRKR 417
++ H R+RTRD R R
Sbjct: 332 EDRHHHRDRDRTRDRERGRDR 352
>02_05_0096 +
25785995-25786311,25786716-25786776,25787825-25788059,
25788292-25788530,25789700-25789951,25790043-25790223,
25790864-25790952,25791269-25791342,25791481-25791584,
25791919-25791957,25792324-25792436
Length = 567
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +1
Query: 304 QRQHEEHHHNNAYCQRKKDHNQESHRERTRDNNVLRKRGSKVKDCQWSTSIANV 465
QRQ ++HHH+N + Q ++ Q R + R S+ K S ++ +
Sbjct: 50 QRQPQQHHHHNHHQQHQQQQQQWLRRNQIAREAAGTDRNSEPKAVAQSPAVDGI 103
>02_01_0473 -
3403547-3404241,3404455-3404983,3405299-3405477,
3405868-3405952,3406136-3406482,3407061-3407159,
3408135-3408636
Length = 811
Score = 28.7 bits (61), Expect = 3.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 322 HHHNNAYCQRKKDHNQESHRER 387
H H +C R DH Q +HR R
Sbjct: 197 HGHVECFCTRSHDHGQRAHRFR 218
>08_02_0707 - 20212190-20214592
Length = 800
Score = 28.3 bits (60), Expect = 4.0
Identities = 16/61 (26%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Frame = +1
Query: 232 HIRSHEREHVHVFLDLQQFAGGPRQRQHEE---HHHNNAYCQRKKDHNQESHRERTRDNN 402
H SH HVH D + H HH +A DH+ +S E + N+
Sbjct: 508 HSHSHSHSHVHGHEDHHNHDHALQGVNHNGACCEHHGDANKSHHHDHHHDSSNEESHHNS 567
Query: 403 V 405
+
Sbjct: 568 L 568
>06_03_1499 + 30593336-30593750,30594352-30595343
Length = 468
Score = 28.3 bits (60), Expect = 4.0
Identities = 11/41 (26%), Positives = 18/41 (43%)
Frame = +1
Query: 265 VFLDLQQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESHRER 387
V + + Q+ GG R H HHH+ + D + +R
Sbjct: 14 VVMVMMQWTGGAAARHHHHHHHHKKSYEEVFDRQEADRVQR 54
>11_04_0314 -
16277292-16277927,16278385-16278514,16278934-16279217,
16279308-16279431,16280442-16280530,16280630-16280706,
16280790-16280922,16282131-16282211,16282372-16282539
Length = 573
Score = 27.9 bits (59), Expect = 5.2
Identities = 19/85 (22%), Positives = 35/85 (41%)
Frame = +1
Query: 214 DAGAGRHIRSHEREHVHVFLDLQQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESHRERTR 393
D GR R ER +F + GGP +R H E + N++ + N + ++
Sbjct: 476 DREEGRAARFEERVRQVMF---NTYFGGPHKRVHPESFYTNSWPECFCQPNPRNRADKCP 532
Query: 394 DNNVLRKRGSKVKDCQWSTSIANVQ 468
+N+ S+ + + I V+
Sbjct: 533 PDNIYEVLESQFQSVEGEEDIEEVK 557
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/42 (30%), Positives = 23/42 (54%)
Frame = +1
Query: 316 EEHHHNNAYCQRKKDHNQESHRERTRDNNVLRKRGSKVKDCQ 441
EE+ HN CQ+ D Q++ E R +N+L ++ + C+
Sbjct: 1299 EENKHNFEECQKFHDEAQKAKMEAERLHNLLLEKQVDAEICK 1340
>02_02_0284 -
8547126-8547187,8547306-8547395,8547810-8547861,
8548209-8548284,8550513-8550632,8553334-8553423,
8553842-8554024,8554125-8554185,8554437-8554477,
8554563-8554727,8555699-8555776,8556137-8556282
Length = 387
Score = 27.9 bits (59), Expect = 5.2
Identities = 25/97 (25%), Positives = 39/97 (40%), Gaps = 5/97 (5%)
Frame = +1
Query: 148 AQSTKSPEHLPHVVHVQSVRVRDAGAGRHI-RSHEREHVHVFLDLQQFAGGPRQRQHE-- 318
A+S K PE + V+ + H RS R ++ G PR R +
Sbjct: 114 AESRKRPEEMRSRARVRGYSDHEGRRSSHYGRSRSRSRSRS----PRYRGRPRSRSYSPA 169
Query: 319 --EHHHNNAYCQRKKDHNQESHRERTRDNNVLRKRGS 423
+A QRK H +S R + +++ V +KR S
Sbjct: 170 PRRRDDYSASPQRKDTHRAKSPRRQPKEHEVDKKRRS 206
>12_01_0407 - 3219980-3221278
Length = 432
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/70 (22%), Positives = 28/70 (40%)
Frame = +1
Query: 295 GPRQRQHEEHHHNNAYCQRKKDHNQESHRERTRDNNVLRKRGSKVKDCQWSTSIANVQLI 474
G H HH +A D + + T + K+G+ + +W+ S+ + LI
Sbjct: 60 GKVDHHHHHHHRQHAKNGMSDDEEHGVNEDATDSQSGKGKKGAAWQRMKWTDSMVKL-LI 118
Query: 475 YCIFVTKFDP 504
+ T DP
Sbjct: 119 TAVSYTGEDP 128
>10_03_0002 - 6858257-6861205
Length = 982
Score = 27.1 bits (57), Expect = 9.1
Identities = 24/91 (26%), Positives = 36/91 (39%)
Frame = +1
Query: 121 NQWSRTPSEAQSTKSPEHLPHVVHVQSVRVRDAGAGRHIRSHEREHVHVFLDLQQFAGGP 300
NQ + TK+ V+ +SVR H RSH ++ H L +
Sbjct: 302 NQSDHVDNILNQTKTMIAASVPVNSESVRTPTGSRVPHFRSH--DYRHPSLSITGAGSNR 359
Query: 301 RQRQHEEHHHNNAYCQRKKDHNQESHRERTR 393
R R H+E ++ DH++E ER R
Sbjct: 360 RSRGHDERSVHS-----PPDHHRERRVERPR 385
>07_01_0070 +
515247-515397,516198-516265,516360-518456,518750-518900,
519883-520638,520990-521164,521303-521387
Length = 1160
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = +1
Query: 238 RSHEREHVHVFLDLQQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESHRERTRDN 399
+S ER H+ +F P Q Q E+ H N +R + NQE + R +
Sbjct: 678 QSVERSHLDSVSPRSKFRRKPAQAQGEDFHQNGV-SRRTRSLNQEGNDMSARSD 730
>06_03_1282 -
28946363-28946533,28947234-28947272,28947399-28947566,
28947605-28947697,28948135-28948215,28948409-28948499,
28948657-28948728,28948803-28948903,28949283-28949381,
28949631-28949954
Length = 412
Score = 27.1 bits (57), Expect = 9.1
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 55 PRSRRSIQRILWCLIFRGFIC 117
PR+R S +R LW +I F+C
Sbjct: 3 PRNRSSARRPLWIVILIAFVC 23
>04_04_0318 +
24347364-24348826,24348920-24349048,24349158-24349293,
24349447-24349535,24349631-24349742,24349836-24349942,
24350033-24350129
Length = 710
Score = 27.1 bits (57), Expect = 9.1
Identities = 19/68 (27%), Positives = 31/68 (45%)
Frame = +1
Query: 223 AGRHIRSHEREHVHVFLDLQQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESHRERTRDNN 402
AGRH + E LD A R+ + ++HHH+ + ++ D + +R RD
Sbjct: 3 AGRHGGYRDYEARERELD----AEASRRSKEQQHHHHPSGRHQRGDSDPRCEADRRRDGG 58
Query: 403 VLRKRGSK 426
R RG +
Sbjct: 59 --RSRGGR 64
>03_01_0520 -
3900387-3900613,3900812-3900853,3902092-3902210,
3903633-3903712,3903829-3903856,3904151-3904272,
3904714-3904857,3904897-3906327
Length = 730
Score = 27.1 bits (57), Expect = 9.1
Identities = 9/29 (31%), Positives = 16/29 (55%)
Frame = +1
Query: 301 RQRQHEEHHHNNAYCQRKKDHNQESHRER 387
+ R H +HH Q+ + HNQ H+++
Sbjct: 166 QNRIHFQHHRQQQQYQQHQHHNQNHHQQQ 194
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,418,584
Number of Sequences: 37544
Number of extensions: 261827
Number of successful extensions: 956
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 846
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 932
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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