Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS329C06f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 35 0.031
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 35 0.031
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 34 0.071
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 33 0.12
U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-li... 32 0.22
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 32 0.29
Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical pr... 31 0.38
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 31 0.50
Z81044-6|CAB02806.1| 360|Caenorhabditis elegans Hypothetical pr... 31 0.66
AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical ... 31 0.66
Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical pr... 30 1.2
U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical pr... 29 1.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 1.5
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 29 2.0
Z78417-12|CAO78731.1| 318|Caenorhabditis elegans Hypothetical p... 29 2.7
Z78417-11|CAE17739.1| 294|Caenorhabditis elegans Hypothetical p... 29 2.7
U55376-4|AAA98006.1| 57|Caenorhabditis elegans Hypothetical pr... 29 2.7
Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical pr... 28 3.5
AL110499-3|CAE18038.1| 437|Caenorhabditis elegans Hypothetical ... 28 3.5
AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical... 28 3.5
Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 27 6.2
U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated p... 27 6.2
U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated p... 27 6.2
AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interact... 27 6.2
AC199160-2|ABO33282.1| 222|Caenorhabditis elegans Hypothetical ... 27 6.2
Z70780-5|CAD91633.1| 779|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z70780-3|CAA94828.2| 828|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z32681-1|CAA83608.1| 761|Caenorhabditis elegans Hypothetical pr... 27 8.1
U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical pr... 27 8.1
U51993-3|AAB36853.2| 958|Caenorhabditis elegans Hypothetical pr... 27 8.1
U39855-3|AAA81082.1| 467|Caenorhabditis elegans Patterned expre... 27 8.1
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 35.1 bits (77), Expect = 0.031
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +1
Query: 199 SVRVRDAGAGRHIRSHEREHVHVFLDLQQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESH 378
SVR R G+GR I + E E++ V + G P Q Q+++ N Y +K + +
Sbjct: 572 SVRQRP-GSGRRISAAELENLMVRQRVPSVQGSPYQMQYDQESLNGGYSSKKYNSVSDMK 630
Query: 379 RERTRDNNVLRKRG 420
R + + N V G
Sbjct: 631 RRKGQRNVVASSAG 644
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 35.1 bits (77), Expect = 0.031
Identities = 22/74 (29%), Positives = 35/74 (47%)
Frame = +1
Query: 199 SVRVRDAGAGRHIRSHEREHVHVFLDLQQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESH 378
SVR R G+GR I + E E++ V + G P Q Q+++ N Y +K + +
Sbjct: 572 SVRQRP-GSGRRISAAELENLMVRQRVPSVQGSPYQMQYDQESLNGGYSSKKYNSVSDMK 630
Query: 379 RERTRDNNVLRKRG 420
R + + N V G
Sbjct: 631 RRKGQRNVVASSAG 644
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 33.9 bits (74), Expect = 0.071
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +1
Query: 292 GGPRQRQHEEHHHNNAYCQRKKDHNQESHRERTRDN 399
G R+R E+HHH++ + +DH HR R++
Sbjct: 271 GADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHREH 306
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical protein
H06O01.2 protein.
Length = 1461
Score = 33.1 bits (72), Expect = 0.12
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 301 RQRQHEEHHHNNAYCQRKKDHNQESHRERTRDNNVLRKRGSKVKDCQWSTS 453
+ + H HHH+ + + +K + H+ER R+ + R RG + D TS
Sbjct: 1385 KHKNHHHHHHHKS--KEEKPKEAKDHKERDREKDRERNRGERRMDHGEGTS 1433
>U56963-2|AAB38119.2| 326|Caenorhabditis elegans Neuropeptide-like
protein protein16 protein.
Length = 326
Score = 32.3 bits (70), Expect = 0.22
Identities = 23/85 (27%), Positives = 36/85 (42%)
Frame = +1
Query: 139 PSEAQSTKSPEHLPHVVHVQSVRVRDAGAGRHIRSHEREHVHVFLDLQQFAGGPRQRQHE 318
P E ++T SPE H+V +D G RS + H H + + G Q+++
Sbjct: 124 PHEKKATHSPEG--HIV------AKDDHHGHEKRSSDSHHGHQKRSVDEHHG--HQKKNA 173
Query: 319 EHHHNNAYCQRKKDHNQESHRERTR 393
E HH + +H E H + R
Sbjct: 174 EDHHEHQKRSEHVEHQAEMHEHQKR 198
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 31.9 bits (69), Expect = 0.29
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +1
Query: 307 RQHEEHHHNNAYCQRKKDHNQESHRERTRDNNVLRKRGSKVKDCQWSTSI 456
++ HHH++ C + +H H E ++ + V+ K K CQ+ I
Sbjct: 318 KKDHNHHHHHCCCGAQNEHEHTHHEEFSKTDKVVNKYHDCAK-CQYKCPI 366
>Z75539-1|CAA99843.1| 672|Caenorhabditis elegans Hypothetical
protein F28C1.1 protein.
Length = 672
Score = 31.5 bits (68), Expect = 0.38
Identities = 27/110 (24%), Positives = 48/110 (43%), Gaps = 10/110 (9%)
Frame = +1
Query: 127 WSRTPSEAQSTKSPEHLPHVVHV--QSVRVRDAGAGRHIRSHEREHVHVFLDLQQFAGGP 300
WSR+ S ++S P R R + + R RS +R+ D ++++
Sbjct: 400 WSRSRSRSRSRSPPRRRSRSRSRTRDRRRPRRSNSRRRSRSRDRQRRSRSRDRRRYSPDR 459
Query: 301 RQRQHEE-----HHHNNAYC---QRKKDHNQESHRERTRDNNVLRKRGSK 426
R+R+ H + + QR KD ++ R+R+RD ++R SK
Sbjct: 460 RERRRSRSRDRRRHRSRSTSRRRQRSKDRRRDRSRDRSRDERNEKRRTSK 509
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 31.1 bits (67), Expect = 0.50
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
Frame = +1
Query: 220 GAGRHIRSHEREHVHVFLDLQQFAGGPR-QRQHEEHHHNNAYCQRKKDHNQESHRERTRD 396
G G H + H+R+ + + PR R+H EH + +R+++ +++ RE+TRD
Sbjct: 2 GRGEH-KEHKRKRSRSKERKRSRSRSPRGSREHREHRDRDRDRERRRE--RDTDREKTRD 58
Query: 397 NNVLRKRGSKVKDCQWSTSIANVQ 468
R K K+ + T+I ++
Sbjct: 59 REKQRD-AEKKKEKESKTAIFEME 81
>Z81044-6|CAB02806.1| 360|Caenorhabditis elegans Hypothetical
protein C30H6.2 protein.
Length = 360
Score = 30.7 bits (66), Expect = 0.66
Identities = 21/63 (33%), Positives = 28/63 (44%)
Frame = +1
Query: 148 AQSTKSPEHLPHVVHVQSVRVRDAGAGRHIRSHEREHVHVFLDLQQFAGGPRQRQHEEHH 327
A ST S + + H++ Q V V D G H H EH H DL+ G H HH
Sbjct: 52 AVSTLSSDAILHIIP-QVVGVHDHG---HNHGHSHEHHHEHTDLENGTSG---HGHSHHH 104
Query: 328 HNN 336
++
Sbjct: 105 DDS 107
>AF068711-1|AAC17775.2| 1121|Caenorhabditis elegans Hypothetical
protein R09A1.1 protein.
Length = 1121
Score = 30.7 bits (66), Expect = 0.66
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +1
Query: 292 GGPRQRQHEEHHHNNAYCQRKKDHNQESHRERTRDNNVLRKRGS 423
GG R + + +H+N+ R D + + + RDN +RGS
Sbjct: 12 GGYRNDRDDRYHNNDRQNYRSSDQGRSGYNDDRRDNRYDDRRGS 55
>Z83223-4|CAB05716.2| 534|Caenorhabditis elegans Hypothetical
protein E01G4.4 protein.
Length = 534
Score = 29.9 bits (64), Expect = 1.2
Identities = 13/36 (36%), Positives = 23/36 (63%)
Frame = +1
Query: 280 QQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESHRER 387
QQ+AG P QRQ ++ ++ NAY R++ Q +++
Sbjct: 48 QQYAGYPPQRQ-QQQYNMNAYAPRQQQQQQYQQQQQ 82
>U41538-3|AAP31431.1| 142|Caenorhabditis elegans Hypothetical
protein R04E5.8b protein.
Length = 142
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Frame = +1
Query: 190 HVQSVRVRDAGAGRHIRSHE----REHVHVFLDLQQFAGGPRQRQHEEHHHNNAYCQRKK 357
H+ R + G H R H R H + G Q Q HHN R++
Sbjct: 57 HIAPARAHNRGQ-HHNRGHHHGPPRNHNQDRNRHRNHDGNRHQNQDRSRHHNQDR-NRRQ 114
Query: 358 DHNQESHRERTRDNNVLRKRGSKVKD 435
+H++ H+ + R+ +RG + +
Sbjct: 115 NHDRNRHQSQGRNRQQDHERGDEAHE 140
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical protein
R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 1.5
Identities = 20/86 (23%), Positives = 34/86 (39%), Gaps = 4/86 (4%)
Frame = +1
Query: 190 HVQSVRVRDAGAGRHIRSHE----REHVHVFLDLQQFAGGPRQRQHEEHHHNNAYCQRKK 357
H+ R + G H R H R H + G Q Q HHN R++
Sbjct: 901 HIAPARAHNRGQ-HHNRGHHHGPPRNHNQDRNRHRNHDGNRHQNQDRSRHHNQDR-NRRQ 958
Query: 358 DHNQESHRERTRDNNVLRKRGSKVKD 435
+H++ H+ + R+ +RG + +
Sbjct: 959 NHDRNRHQSQGRNRQQDHERGDEAHE 984
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 29.1 bits (62), Expect = 2.0
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 283 QFAGGPRQRQHEEHHHNNAYCQRKKDHNQESHRERTRD 396
Q GG RQR++ + + QR +D N + + T+D
Sbjct: 59 QSGGGGRQRRYSNSFEDRDFVQRIEDRNTDPVEQNTKD 96
>Z78417-12|CAO78731.1| 318|Caenorhabditis elegans Hypothetical
protein C35C5.10b protein.
Length = 318
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 87 LVPHLSGIYLLKSMVTDTIRGTVDEVTRAPPSRRPCSI 200
L+P LS Y S+ TV E+ AP SR+ CS+
Sbjct: 264 LIPILSKTYSAMSLAAVDFYKTVYEMNSAPSSRKMCSM 301
>Z78417-11|CAE17739.1| 294|Caenorhabditis elegans Hypothetical
protein C35C5.10a protein.
Length = 294
Score = 28.7 bits (61), Expect = 2.7
Identities = 15/38 (39%), Positives = 20/38 (52%)
Frame = +3
Query: 87 LVPHLSGIYLLKSMVTDTIRGTVDEVTRAPPSRRPCSI 200
L+P LS Y S+ TV E+ AP SR+ CS+
Sbjct: 240 LIPILSKTYSAMSLAAVDFYKTVYEMNSAPSSRKMCSM 277
>U55376-4|AAA98006.1| 57|Caenorhabditis elegans Hypothetical
protein F16H11.2 protein.
Length = 57
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +1
Query: 301 RQRQHEEHHHNNAYCQRKKDHNQESHRERTRDNNVLRKR 417
R+R+ E +R+++ +E RER R+ RKR
Sbjct: 19 REREREREREREREREREREREREREREREREKESNRKR 57
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/44 (27%), Positives = 22/44 (50%)
Frame = +1
Query: 301 RQRQHEEHHHNNAYCQRKKDHNQESHRERTRDNNVLRKRGSKVK 432
R+R+ E +R+++ +E RER R+ R++ S K
Sbjct: 13 REREREREREREREREREREREREREREREREREREREKESNRK 56
>Z99942-7|CAB17070.2| 462|Caenorhabditis elegans Hypothetical
protein H13N06.5 protein.
Length = 462
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/49 (24%), Positives = 17/49 (34%)
Frame = +1
Query: 232 HIRSHEREHVHVFLDLQQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESH 378
H H+ H H G + E+HHH +A+ H H
Sbjct: 80 HAHDHDHGHAHDHGHAHDHHGHSHDEE-EDHHHGHAHDHHGHSHEDHGH 127
>AL110499-3|CAE18038.1| 437|Caenorhabditis elegans Hypothetical
protein Y62F5A.10 protein.
Length = 437
Score = 28.3 bits (60), Expect = 3.5
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +1
Query: 298 PRQRQHEEHHHNN----AYCQRKKDHNQESHRERTRDNNVLRKRGS 423
P++ QH HHH+ A ++ K++ ++ + + N L K S
Sbjct: 8 PKKHQHHHHHHHQKGSVALPKKSKNNRKKKITRKEKSNTALNKTAS 53
>AF039719-12|AAB96758.1| 293|Caenorhabditis elegans Hypothetical
protein K04F10.7 protein.
Length = 293
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 301 RQRQHEEHHHNNAYCQRKKDHNQESHRERTRDNN 402
R R H +H + + + KDH++ + RD+N
Sbjct: 133 RDRDHRQHRPTSHHHRDHKDHHRRDDKHHHRDSN 166
>Z83119-5|CAB05582.3| 1364|Caenorhabditis elegans Hypothetical protein
R05H10.6 protein.
Length = 1364
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = +3
Query: 57 EIPKKYSENSLVPHLSGIYLLKSMVTDTIRGTV 155
E PK Y L ++ G++ ++ V DT+ GT+
Sbjct: 1101 ENPKIYLSKPLTDYVGGVFNVQLQVRDTVDGTI 1133
>Z50029-8|CAA90342.2| 668|Caenorhabditis elegans Hypothetical
protein ZC504.3 protein.
Length = 668
Score = 27.9 bits (59), Expect = 4.7
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +1
Query: 280 QQFAGGPRQRQHEEHHHNNAYCQRKKDHNQESHRERTR 393
+++ ++R HE HH R + + HR+R R
Sbjct: 39 ERYRDKEKERDHERHHDRERRDDRYRKVDSRDHRDRNR 76
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 2/29 (6%)
Frame = +1
Query: 346 QRKKDHNQESHRERT--RDNNVLRKRGSK 426
+ KKD N+E R+RT R+N L+K ++
Sbjct: 107 EEKKDENKEGKRDRTKQRENRTLQKSNAR 135
>U41035-2|AAM69088.1| 1371|Caenorhabditis elegans Uncoordinated
protein 10, isoform b protein.
Length = 1371
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +1
Query: 322 HHHNNAYCQRKKDHNQESHRERTRDNNVLRK 414
H H+N + Q+++ H+Q+ + +RT DNN +R+
Sbjct: 317 HQHHNQHGQQEQ-HHQQMNEQRT-DNNRMRE 345
>U41035-1|AAB37028.2| 1563|Caenorhabditis elegans Uncoordinated
protein 10, isoform a protein.
Length = 1563
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +1
Query: 322 HHHNNAYCQRKKDHNQESHRERTRDNNVLRK 414
H H+N + Q+++ H+Q+ + +RT DNN +R+
Sbjct: 317 HQHHNQHGQQEQ-HHQQMNEQRT-DNNRMRE 345
>AF257062-1|AAK49331.1| 1563|Caenorhabditis elegans Rab3-interacting
molecule UNC-10 protein.
Length = 1563
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/31 (38%), Positives = 23/31 (74%)
Frame = +1
Query: 322 HHHNNAYCQRKKDHNQESHRERTRDNNVLRK 414
H H+N + Q+++ H+Q+ + +RT DNN +R+
Sbjct: 317 HQHHNQHGQQEQ-HHQQMNEQRT-DNNRMRE 345
>AC199160-2|ABO33282.1| 222|Caenorhabditis elegans Hypothetical
protein CE7X_3.2 protein.
Length = 222
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = +1
Query: 241 SHEREHVHVFLDLQQFAGGPRQRQHEEH 324
S ER + ++ LQQ G R QHE H
Sbjct: 141 SIERANPRLYKTLQQIPGSTRNAQHENH 168
>Z70780-5|CAD91633.1| 779|Caenorhabditis elegans Hypothetical
protein F46B6.5c protein.
Length = 779
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/40 (25%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 283 QFAGGPRQRQ--HEEHHHNNAYCQRKKDHNQESHRERTRD 396
++ P+Q + E+ H + +R++DH + + R+R R+
Sbjct: 444 RYGSSPQQSRPVEEQKRHRDTEKERERDHEKRTDRDRDRE 483
>Z70780-3|CAA94828.2| 828|Caenorhabditis elegans Hypothetical
protein F46B6.5a protein.
Length = 828
Score = 27.1 bits (57), Expect = 8.1
Identities = 10/40 (25%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = +1
Query: 283 QFAGGPRQRQ--HEEHHHNNAYCQRKKDHNQESHRERTRD 396
++ P+Q + E+ H + +R++DH + + R+R R+
Sbjct: 444 RYGSSPQQSRPVEEQKRHRDTEKERERDHEKRTDRDRDRE 483
>Z32681-1|CAA83608.1| 761|Caenorhabditis elegans Hypothetical
protein F56F3.1 protein.
Length = 761
Score = 27.1 bits (57), Expect = 8.1
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
Frame = +1
Query: 130 SRTPSEAQSTKSPEHLPHVV-HVQSVRVRDAGAGRHIRSHEREHVHVFLDLQQFAGGPRQ 306
S+ PS+ + P ++ H+Q + A +G+HI H + GGP+
Sbjct: 390 SKEPSKVSPLQDPSQQAQLLQHLQKFAKQQAESGQHIHHHRQP--------TPPNGGPQH 441
Query: 307 RQHEEH 324
+QH H
Sbjct: 442 QQHLHH 447
>U88308-4|AAB42323.1| 299|Caenorhabditis elegans Hypothetical
protein C32E8.5 protein.
Length = 299
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +1
Query: 298 PRQRQHEEHHHNNAYCQRKKDHNQESHRERTRDNNVLRKRGSKVKDCQWS 447
PR R+H + R + ++++ R+ RD++ KR +VK+ Q+S
Sbjct: 6 PRDRRHRDRSPERRRRSRSRSRDRQTRRDTRRDDSPKIKR--EVKEEQFS 53
>U51993-3|AAB36853.2| 958|Caenorhabditis elegans Hypothetical
protein F56F10.4 protein.
Length = 958
Score = 27.1 bits (57), Expect = 8.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 94 GTKEFSEYFFGISECEWEACIAKFVVLVC 8
GT+ +S YFF E E C VVL+C
Sbjct: 343 GTENYSNYFFPNFEYVPEDCKKSGVVLIC 371
>U39855-3|AAA81082.1| 467|Caenorhabditis elegans Patterned
expression site protein 8 protein.
Length = 467
Score = 27.1 bits (57), Expect = 8.1
Identities = 8/24 (33%), Positives = 16/24 (66%)
Frame = +1
Query: 304 QRQHEEHHHNNAYCQRKKDHNQES 375
Q H++HH +N Y + + +++Q S
Sbjct: 282 QSHHQQHHQHNQYSRNQAEYDQGS 305
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,271,073
Number of Sequences: 27780
Number of extensions: 213936
Number of successful extensions: 1021
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 889
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 999
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -