Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329C05f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                23   2.5  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    22   4.4  
DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse tr...    21   5.8  
DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse tr...    21   5.8  
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    21   7.7  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/37 (29%), Positives = 14/37 (37%)
 Frame = -1

Query: 425 HITGAHTHKHTQFSP*QEHDFRIQETSRVHLHTSPSL 315
           H  G HT   T   P   H  + Q    +H    P+L
Sbjct: 336 HQHGNHTMGPTMGPPHHHHHHQTQSLQHLHYRQPPTL 372


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 6/17 (35%), Positives = 14/17 (82%)
 Frame = +2

Query: 428 FENISLIKKHVVIIVLF 478
           F+N+ L+KK  +++++F
Sbjct: 10  FQNVVLVKKVKIVLLIF 26


>DQ494419-1|ABF55370.1|  127|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 127

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 456 CFLINDMFSNSH 421
           C LI D+F N H
Sbjct: 45  CILIKDLFDNVH 56


>DQ494418-1|ABF55369.1|  110|Apis mellifera telomerase reverse
           transcriptase protein.
          Length = 110

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = -3

Query: 456 CFLINDMFSNSH 421
           C LI D+F N H
Sbjct: 28  CILIKDLFDNVH 39


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 10/32 (31%), Positives = 13/32 (40%)
 Frame = -3

Query: 486 NFRNKTIITTCFLINDMFSNSHYGSTHTQTHT 391
           + R  T+   C L    FS       H +THT
Sbjct: 35  HIRTHTLPCKCHLCGKAFSRPWLLQGHIRTHT 66


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,766
Number of Sequences: 438
Number of extensions: 2997
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)