Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329C01f
         (521 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q0RV96 Cluster: Possible transposase; n=1; Rhodococcus ...    35   1.3  
UniRef50_Q39LT2 Cluster: Beta-galactosidase/beta-glucuronidase f...    33   3.0  
UniRef50_UPI0000E48E4E Cluster: PREDICTED: similar to ENSANGP000...    33   5.2  
UniRef50_A3VE99 Cluster: Putative transferase; n=1; Rhodobactera...    33   5.2  
UniRef50_A7TG08 Cluster: Putative uncharacterized protein; n=1; ...    32   6.9  
UniRef50_Q01X81 Cluster: Conserved repeat domain precursor; n=1;...    32   9.2  
UniRef50_A6LH77 Cluster: Putative outer membrane protein, probab...    32   9.2  

>UniRef50_Q0RV96 Cluster: Possible transposase; n=1; Rhodococcus sp.
           RHA1|Rep: Possible transposase - Rhodococcus sp. (strain
           RHA1)
          Length = 799

 Score = 34.7 bits (76), Expect = 1.3
 Identities = 20/67 (29%), Positives = 38/67 (56%)
 Frame = +2

Query: 200 DYGLI*RTSFRSYKLCSGAWNYQPNMESRTSTIYLAYTAHRVHRALGISLSNFIKRHSFI 379
           D+  + R  FR+Y LC+ +   +P   S  S +  A+ + R+ + L +S+++F+K    +
Sbjct: 57  DFADVPRARFRAYGLCAVSQCERP-WTSMNSGLCEAHRSQRI-KTLKVSMADFLKHPKVV 114

Query: 380 RRRSFTS 400
            R+SF S
Sbjct: 115 ARKSFGS 121


>UniRef50_Q39LT2 Cluster: Beta-galactosidase/beta-glucuronidase
           family protein; n=1; Burkholderia sp. 383|Rep:
           Beta-galactosidase/beta-glucuronidase family protein -
           Burkholderia sp. (strain 383) (Burkholderia cepacia
           (strain ATCC 17760/ NCIB 9086 / R18194))
          Length = 962

 Score = 33.5 bits (73), Expect = 3.0
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = -1

Query: 518 AGAGWIAGTKGGVTITASSVNATSRPDGANLCPNCPG 408
           AG+GW+AG  G +  T+ +V        A + P  PG
Sbjct: 17  AGSGWLAGCNGDIDSTSGAVGTPGADGPATVAPTVPG 53


>UniRef50_UPI0000E48E4E Cluster: PREDICTED: similar to
           ENSANGP00000005397; n=4; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to ENSANGP00000005397
           - Strongylocentrotus purpuratus
          Length = 1719

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
 Frame = +3

Query: 321 ECIELWESASAILSNAT--VLSDAAVLPASAAWTVW--AEVRSVGS*CSVH*RRCDCNPA 488
           E I++  S+  I  N T  V  + +  P + A  VW  ++V SVG  C ++   C+ NP 
Sbjct: 768 ENIQIIHSSEGISKNYTHKVPVEQSDTPEAIAEGVWIVSKVPSVGLQCEINIDECESNPC 827

Query: 489 LRAG 500
           LR G
Sbjct: 828 LRGG 831


>UniRef50_A3VE99 Cluster: Putative transferase; n=1; Rhodobacterales
           bacterium HTCC2654|Rep: Putative transferase -
           Rhodobacterales bacterium HTCC2654
          Length = 404

 Score = 32.7 bits (71), Expect = 5.2
 Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
 Frame = -2

Query: 163 RTIVEIAPVLSSC-NRTYMDHW-GRYCAEHP-SADCILRHCREQSTTQE 26
           RT++    +  +C N  YMD+  G+ C   P S DCI  HC ++S  Q+
Sbjct: 113 RTLIHAHDMFVACPNGVYMDYQKGQVCTRVPLSLDCISTHCDKRSYPQK 161


>UniRef50_A7TG08 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 798

 Score = 32.3 bits (70), Expect = 6.9
 Identities = 14/41 (34%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
 Frame = +3

Query: 159 VLGQSRI*SSRGVWTMVSF-NEQVSVLTNYVRAHGITNQIW 278
           ++  S I ++RG W++++F NE  +V T+Y + H  T   W
Sbjct: 319 IMASSTINANRGEWSIIAFPNENSTVFTHYDQLHKTTVHKW 359


>UniRef50_Q01X81 Cluster: Conserved repeat domain precursor; n=1;
           Solibacter usitatus Ellin6076|Rep: Conserved repeat
           domain precursor - Solibacter usitatus (strain
           Ellin6076)
          Length = 785

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 14/32 (43%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
 Frame = +1

Query: 34  LCFVLGSAVG-YNLQRDAPHNIGPNDPYKFDY 126
           LCF  GS +G ++  +  P N GPN+P +F Y
Sbjct: 292 LCFQGGSGIGSFDAVKADPANFGPNNPRRFAY 323


>UniRef50_A6LH77 Cluster: Putative outer membrane protein, probably
           involved in nutrient binding; n=2; Parabacteroides|Rep:
           Putative outer membrane protein, probably involved in
           nutrient binding - Parabacteroides distasonis (strain
           ATCC 8503 / DSM 20701 / NCTC11152)
          Length = 537

 Score = 31.9 bits (69), Expect = 9.2
 Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 3/37 (8%)
 Frame = -2

Query: 160 TIVEIAPVLSSCN---RTYMDHWGRYCAEHPSADCIL 59
           T+ +  P ++S     R+  DHWG +CA+  SAD I+
Sbjct: 40  TVDDFTPSIASVYSYLRSQSDHWGYFCAQEVSADAIV 76


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 533,991,465
Number of Sequences: 1657284
Number of extensions: 10249754
Number of successful extensions: 32849
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 31588
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32822
length of database: 575,637,011
effective HSP length: 95
effective length of database: 418,195,031
effective search space used: 32619212418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)