Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329C01f
         (521 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    22   2.9  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    22   3.8  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    21   5.0  
DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13 pro...    21   6.6  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   6.6  
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.7  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   8.7  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    21   8.7  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 2.9
 Identities = 11/37 (29%), Positives = 18/37 (48%)
 Frame = +2

Query: 326 HRALGISLSNFIKRHSFIRRRSFTSVRSLDSLGRGSL 436
           +  +G  +SN I+        +  S  S+ +LGRG L
Sbjct: 76  YTTIGSPISNRIRHEMATPMATMNSYGSVGTLGRGDL 112


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 14/43 (32%), Positives = 21/43 (48%)
 Frame = -1

Query: 341 FPKLDALGAPYTLDKSYWFGTPYLVGNSMRPNIVCKNGNLFVK 213
           F KLD LGA    ++       +L+G S+  N+      LF+K
Sbjct: 117 FLKLDQLGATVRNNRQIRRMVVFLIGVSLSFNLFGDLLTLFIK 159


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory
          receptor candidate 36 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 14 MRPLLLCCALFSAVP 58
          +RP+   C LF+ VP
Sbjct: 11 LRPIFAVCRLFALVP 25


>DQ659252-1|ABG47450.1|  377|Tribolium castaneum chitinase 13
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -1

Query: 332 LDALGAPYTLDKSYWFG 282
           LD +  PY  + ++W G
Sbjct: 309 LDDMKVPYMYEDTFWIG 325


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.0 bits (42), Expect = 6.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 475 IVTPPFVPAIQPAPA 519
           ++TPP  PA  P P+
Sbjct: 18  LLTPPHNPAYSPPPS 32


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 324 CIELWESASAIL 359
           CIE+W+S+ + L
Sbjct: 227 CIEIWQSSESSL 238


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 272 NMESRTSTIYLAYTAHRVHRAL 337
           + +S+  T+ +    HRVHR +
Sbjct: 387 DFDSKLQTMNIKVNYHRVHRKI 408


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/22 (31%), Positives = 13/22 (59%)
 Frame = +2

Query: 272 NMESRTSTIYLAYTAHRVHRAL 337
           + +S+  T+ +    HRVHR +
Sbjct: 112 DFDSKLQTMNIKVNYHRVHRKI 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,126
Number of Sequences: 336
Number of extensions: 2436
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12573240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)