Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS329B12f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT012670-1|AAT08476.1| 322|Drosophila melanogaster LP12114p pro... 50 2e-06
AY069537-1|AAL39682.3| 301|Drosophila melanogaster LD25772p pro... 50 2e-06
AE014296-2541|AAS64998.1| 301|Drosophila melanogaster CG12304-P... 50 2e-06
AE014296-2540|AAF49612.1| 334|Drosophila melanogaster CG12304-P... 50 2e-06
AY094883-1|AAM11236.1| 443|Drosophila melanogaster RE51913p pro... 29 2.9
AE014135-28|AAN06558.1| 443|Drosophila melanogaster CG32006-PA ... 29 2.9
AY069726-1|AAL39871.1| 1122|Drosophila melanogaster LP03102p pro... 24 7.4
AE013599-3838|AAF47181.1| 1122|Drosophila melanogaster CG3356-PA... 24 7.4
>BT012670-1|AAT08476.1| 322|Drosophila melanogaster LP12114p
protein.
Length = 322
Score = 50.0 bits (114), Expect = 2e-06
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Frame = -1
Query: 446 PKVNLRLIFKAAADSELKLS-ALSTPILGNVNILRYLSLAYPTIIPYDHND--HIVDNLL 276
PK+++ LI+K +E+ S + PI G VNI+RYL P Y+ + + +D +L
Sbjct: 187 PKISVTLIWKNCEHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSPLCNEIDLVL 246
Query: 275 DICHVLER-TSEKNKEAVVNRLFAHFKTWIY--GDKFSVVDLAAYN 147
DIC+ L R + K + A+V L + Y G + SV D+ Y+
Sbjct: 247 DICYQLLRCNTHKTQVAMVRLLDKRLQKQQYFGGSQMSVADVGVYS 292
>AY069537-1|AAL39682.3| 301|Drosophila melanogaster LD25772p
protein.
Length = 301
Score = 50.0 bits (114), Expect = 2e-06
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Frame = -1
Query: 446 PKVNLRLIFKAAADSELKLS-ALSTPILGNVNILRYLSLAYPTIIPYDHND--HIVDNLL 276
PK+++ LI+K +E+ S + PI G VNI+RYL P Y+ + + +D +L
Sbjct: 166 PKISVTLIWKNCEHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSPLCNEIDLVL 225
Query: 275 DICHVLER-TSEKNKEAVVNRLFAHFKTWIY--GDKFSVVDLAAYN 147
DIC+ L R + K + A+V L + Y G + SV D+ Y+
Sbjct: 226 DICYQLLRCNTHKTQVAMVRLLDKRLQKQQYFGGSQMSVADVGVYS 271
>AE014296-2541|AAS64998.1| 301|Drosophila melanogaster CG12304-PB,
isoform B protein.
Length = 301
Score = 50.0 bits (114), Expect = 2e-06
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Frame = -1
Query: 446 PKVNLRLIFKAAADSELKLS-ALSTPILGNVNILRYLSLAYPTIIPYDHND--HIVDNLL 276
PK+++ LI+K +E+ S + PI G VNI+RYL P Y+ + + +D +L
Sbjct: 166 PKISVTLIWKNCEHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSPLCNEIDLVL 225
Query: 275 DICHVLER-TSEKNKEAVVNRLFAHFKTWIY--GDKFSVVDLAAYN 147
DIC+ L R + K + A+V L + Y G + SV D+ Y+
Sbjct: 226 DICYQLLRCNTHKTQVAMVRLLDKRLQKQQYFGGSQMSVADVGVYS 271
>AE014296-2540|AAF49612.1| 334|Drosophila melanogaster CG12304-PA,
isoform A protein.
Length = 334
Score = 50.0 bits (114), Expect = 2e-06
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 6/106 (5%)
Frame = -1
Query: 446 PKVNLRLIFKAAADSELKLS-ALSTPILGNVNILRYLSLAYPTIIPYDHND--HIVDNLL 276
PK+++ LI+K +E+ S + PI G VNI+RYL P Y+ + + +D +L
Sbjct: 199 PKISVTLIWKNCEHTEMISSPTMYVPIYGEVNIIRYLGRVGPAEYRYEGSPLCNEIDLVL 258
Query: 275 DICHVLER-TSEKNKEAVVNRLFAHFKTWIY--GDKFSVVDLAAYN 147
DIC+ L R + K + A+V L + Y G + SV D+ Y+
Sbjct: 259 DICYQLLRCNTHKTQVAMVRLLDKRLQKQQYFGGSQMSVADVGVYS 304
>AY094883-1|AAM11236.1| 443|Drosophila melanogaster RE51913p
protein.
Length = 443
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1
Query: 311 YDHNDHIVDNLLDIC 267
YD ND I++NLLD+C
Sbjct: 425 YDRNDDILENLLDVC 439
>AE014135-28|AAN06558.1| 443|Drosophila melanogaster CG32006-PA
protein.
Length = 443
Score = 29.5 bits (63), Expect = 2.9
Identities = 10/15 (66%), Positives = 13/15 (86%)
Frame = -1
Query: 311 YDHNDHIVDNLLDIC 267
YD ND I++NLLD+C
Sbjct: 425 YDRNDDILENLLDVC 439
>AY069726-1|AAL39871.1| 1122|Drosophila melanogaster LP03102p
protein.
Length = 1122
Score = 23.8 bits (49), Expect(2) = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 152 YNLIKQWRNTPKFVSKVWF 96
Y L+ TPKF+ VWF
Sbjct: 489 YKLLYTLAFTPKFIRAVWF 507
Score = 22.6 bits (46), Expect(2) = 7.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 314 PYDHNDHIVDNLLDICHVL 258
P+ N H++ L +ICH L
Sbjct: 460 PHIENTHLIYALCEICHNL 478
>AE013599-3838|AAF47181.1| 1122|Drosophila melanogaster CG3356-PA
protein.
Length = 1122
Score = 23.8 bits (49), Expect(2) = 7.4
Identities = 9/19 (47%), Positives = 11/19 (57%)
Frame = -1
Query: 152 YNLIKQWRNTPKFVSKVWF 96
Y L+ TPKF+ VWF
Sbjct: 489 YKLLYTLAFTPKFIRAVWF 507
Score = 22.6 bits (46), Expect(2) = 7.4
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -1
Query: 314 PYDHNDHIVDNLLDICHVL 258
P+ N H++ L +ICH L
Sbjct: 460 PHIENTHLIYALCEICHNL 478
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,341,551
Number of Sequences: 53049
Number of extensions: 347143
Number of successful extensions: 783
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 760
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 783
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -