Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329B07f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094816-1|AAM11169.1|  632|Drosophila melanogaster LD33222p pro...    60   2e-09
AE014298-1845|AAF48225.1|  757|Drosophila melanogaster CG4351-PA...    60   2e-09
AY241926-1|AAO85275.1|  827|Drosophila melanogaster chondroitin ...    35   0.077
AE014298-2180|AAS65341.2|  832|Drosophila melanogaster CG9220-PC...    35   0.077
AY119236-1|AAM51096.1|  206|Drosophila melanogaster SD19278p pro...    28   8.8  

>AY094816-1|AAM11169.1|  632|Drosophila melanogaster LD33222p
           protein.
          Length = 632

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 38/82 (46%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
 Frame = +2

Query: 233 DSLVLLAVPHIDFNQDFLNRVRMNTISGEQWYLPSAFSRY-AQYEHPAFVTPTGAKPQSN 409
           +SLVLLA P + F  DFLNRVRMNTI G Q Y P  F  Y  ++ H      T    QS 
Sbjct: 441 ESLVLLATPGMVFKADFLNRVRMNTIQGFQVYAPIGFQMYPCRWAHFCRECDTCDVSQS- 499

Query: 410 TGRFNVHLSLVSSFYRSDYDSA 475
           +G F+ H   V +FY  DY  A
Sbjct: 500 SGYFDRHNHDVIAFYSRDYVQA 521


>AE014298-1845|AAF48225.1|  757|Drosophila melanogaster CG4351-PA
           protein.
          Length = 757

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 38/82 (46%), Positives = 45/82 (54%), Gaps = 1/82 (1%)
 Frame = +2

Query: 233 DSLVLLAVPHIDFNQDFLNRVRMNTISGEQWYLPSAFSRY-AQYEHPAFVTPTGAKPQSN 409
           +SLVLLA P + F  DFLNRVRMNTI G Q Y P  F  Y  ++ H      T    QS 
Sbjct: 566 ESLVLLATPGMVFKADFLNRVRMNTIQGFQVYAPIGFQMYPCRWAHFCRECDTCDVSQS- 624

Query: 410 TGRFNVHLSLVSSFYRSDYDSA 475
           +G F+ H   V +FY  DY  A
Sbjct: 625 SGYFDRHNHDVIAFYSRDYVQA 646


>AY241926-1|AAO85275.1|  827|Drosophila melanogaster chondroitin
           synthase-like protein protein.
          Length = 827

 Score = 34.7 bits (76), Expect = 0.077
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +2

Query: 224 VPRDSLVLLAVPHIDFNQDFLNRVRMNTISGEQWYLPSAFSRY 352
           + ++ ++L     + F  + L RVRM+T  G+Q YLP  FS+Y
Sbjct: 609 IRQEDIILFIDVDMVFEVETLQRVRMHTQRGKQVYLPIVFSQY 651


>AE014298-2180|AAS65341.2|  832|Drosophila melanogaster CG9220-PC
           protein.
          Length = 832

 Score = 34.7 bits (76), Expect = 0.077
 Identities = 16/43 (37%), Positives = 26/43 (60%)
 Frame = +2

Query: 224 VPRDSLVLLAVPHIDFNQDFLNRVRMNTISGEQWYLPSAFSRY 352
           + ++ ++L     + F  + L RVRM+T  G+Q YLP  FS+Y
Sbjct: 614 IRQEDIILFIDVDMVFEVETLQRVRMHTQRGKQVYLPIVFSQY 656


>AY119236-1|AAM51096.1|  206|Drosophila melanogaster SD19278p
           protein.
          Length = 206

 Score = 27.9 bits (59), Expect = 8.8
 Identities = 14/35 (40%), Positives = 18/35 (51%)
 Frame = +2

Query: 344 SRYAQYEHPAFVTPTGAKPQSNTGRFNVHLSLVSS 448
           SRY Q   P F+ P GA  Q   GRF +  S + +
Sbjct: 46  SRYLQQAQPEFIFPEGANKQ--RGRFELAFSQIGT 78


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.316    0.129    0.384 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,942,232
Number of Sequences: 53049
Number of extensions: 282576
Number of successful extensions: 985
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 952
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)