Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS329B03f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein ( Dros... 67 1e-11
AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein. 56 4e-08
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 45 5e-05
X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein ( Dros... 43 2e-04
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 43 2e-04
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 43 2e-04
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 43 3e-04
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 42 4e-04
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 42 4e-04
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 42 4e-04
M22874-2|AAA28675.1| 916|Drosophila melanogaster protein ( D.me... 41 9e-04
AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p pro... 41 9e-04
U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative rever... 39 0.004
M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2 ... 39 0.004
AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein ... 39 0.004
U02279-1|AAA18301.1| 964|Drosophila melanogaster protein ( Dros... 38 0.011
AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein ... 38 0.011
AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein ... 38 0.011
AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein ... 38 0.011
AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein ... 38 0.011
AJ278684-2|CAB99192.1| 989|Drosophila melanogaster endonuclease... 38 0.011
AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein ... 37 0.014
AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein ... 37 0.014
AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein ... 37 0.014
AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein ... 37 0.014
AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p pro... 35 0.077
AY071627-1|AAL49249.1| 511|Drosophila melanogaster RE67487p pro... 29 3.8
AE013599-3196|AAF46721.1| 511|Drosophila melanogaster CG9841-PA... 29 3.8
U86010-1|AAB95640.1| 1920|Drosophila melanogaster zinc-finger nu... 28 6.7
AY058335-1|AAL13564.1| 1893|Drosophila melanogaster GH10905p pro... 28 6.7
AL031227-3|CAA20227.1| 1891|Drosophila melanogaster EG:66A1.1,FB... 28 6.7
AE014298-646|AAX52476.1| 1894|Drosophila melanogaster CG12212-PB... 28 6.7
AE014298-645|AAF45960.2| 1894|Drosophila melanogaster CG12212-PA... 28 6.7
AE013599-3144|AAM70856.1| 980|Drosophila melanogaster CG30389-P... 28 6.7
AE013599-3143|AAF46685.2| 980|Drosophila melanogaster CG30389-P... 28 6.7
>X51967-1|CAA36225.1| 1057|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type II retrotransposable
element R2Dm. ).
Length = 1057
Score = 67.3 bits (157), Expect = 1e-11
Identities = 35/114 (30%), Positives = 59/114 (51%)
Frame = -2
Query: 382 QAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*TVLKKKGVP 203
Q GF P C+D ++ ++L + + +D KAFD++S +SI L+ G P
Sbjct: 446 QRGFLPTDGCADNATIVDLVLRHSHKHFRSCYIANLDVSKAFDSLSHASIYDTLRAYGAP 505
Query: 202 DKLINVIKALYYGSSCRVLHRGKLTDNIVVTAGVKQGCLLSPLLFIMVLDDVMR 41
++ ++ Y G + G ++ V GVKQG LSP+LF +V+D ++R
Sbjct: 506 KGFVDYVQNTYEGGGTSLNGDGWSSEEFVPARGVKQGDPLSPILFNLVMDRLLR 559
>AJ302712-2|CAC16871.1| 1227|Drosophila melanogaster pol protein.
Length = 1227
Score = 55.6 bits (128), Expect = 4e-08
Identities = 33/121 (27%), Positives = 59/121 (48%)
Frame = -2
Query: 394 LREEQAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*TVLKK 215
+ Q F+ S D + ++ + V L DFE+AFD V ++ L++
Sbjct: 544 ISHNQVAFKSNHSTMDALLRIQHFASNALSTKNHVSILATDFERAFDRVGIHAVLCRLER 603
Query: 214 KGVPDKLINVIKALYYGSSCRVLHRGKLTDNIVVTAGVKQGCLLSPLLFIMVLDDVMRRV 35
G+ +L N+IKA S RV +++ ++ G+ QG LS +LF++ ++D+ V
Sbjct: 604 WGIGPRLYNLIKAFMTNRSFRVRINNVTSNSHILHNGIPQGSPLSVVLFMIAIEDINDIV 663
Query: 34 T 32
T
Sbjct: 664 T 664
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 45.2 bits (102), Expect = 5e-05
Identities = 35/116 (30%), Positives = 53/116 (45%)
Frame = -2
Query: 394 LREEQAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*TVLKK 215
L + Q GFR S +Q++ L + Q + + +FID ++AFD V W K
Sbjct: 545 LPDHQFGFRQGHSTVEQVHRLTKHILQAFDDKEYCNAVFIDMQQAFDRV-WHDGLISKVK 603
Query: 214 KGVPDKLINVIKALYYGSSCRVLHRGKLTDNIVVTAGVKQGCLLSPLLFIMVLDDV 47
K P V+K+ V R + V+ AGV QG +L PLL+ + D+
Sbjct: 604 KLFPAPYYGVLKSYLEDRRFMVRVRNSYSIPRVMRAGVPQGSVLGPLLYSVFTADL 659
>X51968-2|CAA36227.1| 1021|Drosophila melanogaster protein (
Drosophila melanogasterDNA for type I retrotransposable
element R1Dm. ).
Length = 1021
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/91 (27%), Positives = 48/91 (52%)
Frame = -2
Query: 292 VFTLFIDFEKAFDNVSWSSI*TVLKKKGVPDKLINVIKALYYGSSCRVLHRGKLTDNIVV 113
V F+DF+ AFDNV WS+ + L G + + + ++ + G V+ T + V
Sbjct: 572 VLGTFVDFKGAFDNVEWSAALSRLADLGCRE--MGLWQSFFSGRRA-VIRSSSGTVEVPV 628
Query: 112 TAGVKQGCLLSPLLFIMVLDDVMRRVTCKCR 20
T G QG + P ++ +++D +++R+ C+
Sbjct: 629 TRGCPQGSISGPFIWDILMDVLLQRLQPYCQ 659
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/27 (44%), Positives = 20/27 (74%)
Frame = -1
Query: 488 ANWRGISLLPICSKVLAKILLMRMAKV 408
+++RGI LLP+ KVL I++ R+ +V
Sbjct: 510 SSYRGICLLPVFGKVLEAIMVNRVREV 536
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 43.2 bits (97), Expect = 2e-04
Identities = 28/119 (23%), Positives = 53/119 (44%)
Frame = -2
Query: 406 VDSELREEQAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*T 227
+++ L Q GFR + +Q+N + + E + +F+D +AFD V W
Sbjct: 536 INNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRV-WLDGLL 594
Query: 226 VLKKKGVPDKLINVIKALYYGSSCRVLHRGKLTDNIVVTAGVKQGCLLSPLLFIMVLDD 50
K +P ++K+ Y + + + + + AGV QG +L P+L+ + D
Sbjct: 595 FKIIKLLPQNTHKLLKSYLYNTVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTAD 653
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/116 (28%), Positives = 54/116 (46%), Gaps = 2/116 (1%)
Frame = -2
Query: 388 EEQAGFRPERSCSDQIN-LLRMILEQCQEMQ-CEVFTLFIDFEKAFDNVSWSSI*TVLKK 215
E Q GFR +Q++ ++ IL + C +LF+D +AFD V W + K
Sbjct: 546 EHQFGFRAGHCTVEQLHRVVEQILTAYDSKEYCN--SLFLDIREAFDRV-WHIGLQLKIK 602
Query: 214 KGVPDKLINVIKALYYGSSCRVLHRGKLTDNIVVTAGVKQGCLLSPLLFIMVLDDV 47
+ +P ++K+ G V ++ V AGV QG +L PLL+ + D+
Sbjct: 603 QTLPAPYFGLLKSYLEGRRFAVRFHSAISTEHNVAAGVPQGSVLGPLLYCLYSHDM 658
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/112 (25%), Positives = 48/112 (42%)
Frame = -2
Query: 382 QAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*TVLKKKGVP 203
Q GFR +Q+N + + E + +F+D +AFD V W K +P
Sbjct: 546 QFGFRESHGTIEQVNRITTEIRTAFEYREYCTAVFLDVSQAFDKV-WLDGLMFKIKISLP 604
Query: 202 DKLINVIKALYYGSSCRVLHRGKLTDNIVVTAGVKQGCLLSPLLFIMVLDDV 47
+ ++K+ Y V + + AGV QG +L P L+++ D+
Sbjct: 605 ESTHKLLKSYLYDRKFAVRCNTATSTVHTIEAGVPQGSVLGPTLYLIYTADI 656
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 42.3 bits (95), Expect = 4e-04
Identities = 28/119 (23%), Positives = 52/119 (43%)
Frame = -2
Query: 406 VDSELREEQAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*T 227
+++ L Q GFR + +Q+N + + E + +F+D +AFD V W
Sbjct: 536 INNTLPTHQFGFREKHGTIEQVNRITSEIRTAFEHREYCTAIFLDVAQAFDRV-WLDGLL 594
Query: 226 VLKKKGVPDKLINVIKALYYGSSCRVLHRGKLTDNIVVTAGVKQGCLLSPLLFIMVLDD 50
K +P ++K+ Y + + + + AGV QG +L P+L+ + D
Sbjct: 595 FKIIKLLPQNTHKLLKSYLYNRVFAIRCDTSTSRDCAIEAGVPQGSVLGPILYTLYTAD 653
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 42.3 bits (95), Expect = 4e-04
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
Frame = -2
Query: 406 VDSELREEQAGFRPE-RSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI* 230
+ + L Q GFR + + L I E Q Q V + +D E AFD V +
Sbjct: 565 IHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQ-SVGLVTLDIEAAFDTVWHDGLL 623
Query: 229 TVLKKKGVPDKLINVIKALYYGSSCRVLHRGKLTDNIVVTAGVKQGCLLSPLLFIMVLDD 50
LK G P LI +++ V + ++ AGV QG +L P LF + D
Sbjct: 624 HKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHD 683
Query: 49 VMRRVTC 29
+ + C
Sbjct: 684 IPQATNC 690
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 42.3 bits (95), Expect = 4e-04
Identities = 35/127 (27%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
Frame = -2
Query: 406 VDSELREEQAGFRPE-RSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI* 230
+ + L Q GFR + + L I E Q Q V + +D E AFD V +
Sbjct: 513 IHNTLPTVQYGFRNGLNTILPTLKLRNYIKESIQSKQ-SVGLVTLDIEAAFDTVWHDGLL 571
Query: 229 TVLKKKGVPDKLINVIKALYYGSSCRVLHRGKLTDNIVVTAGVKQGCLLSPLLFIMVLDD 50
LK G P LI +++ V + ++ AGV QG +L P LF + D
Sbjct: 572 HKLKMIGTPIYLIKIVQNFLTHRYFSVNLNSSQSARRILNAGVPQGSVLGPTLFNIFTHD 631
Query: 49 VMRRVTC 29
+ + C
Sbjct: 632 IPQATNC 638
>M22874-2|AAA28675.1| 916|Drosophila melanogaster protein (
D.melanogaster LINEelement J-1, clone J-1. ).
Length = 916
Score = 41.1 bits (92), Expect = 9e-04
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Frame = -2
Query: 412 KWVDSELREEQAGFRPERSCSDQIN-LLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSS 236
K V + + Q GFR + +Q++ ++ LE + + V F+D ++AFD V W
Sbjct: 540 KDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGA-FLDIQQAFDRV-WHP 597
Query: 235 I*TVLKKKGVPDKLINVIKALYYGSSCRVLHRGKLTDNIVVTAGVKQGCLLSPLLFIMVL 56
K+ P +L V+K+ + V G + + AGV QG +L P L+ +
Sbjct: 598 GLLYKAKRLFPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFA 657
Query: 55 DDV 47
D+
Sbjct: 658 SDM 660
>AY089343-1|AAL90081.2| 718|Drosophila melanogaster AT16518p
protein.
Length = 718
Score = 41.1 bits (92), Expect = 9e-04
Identities = 33/123 (26%), Positives = 57/123 (46%), Gaps = 1/123 (0%)
Frame = -2
Query: 412 KWVDSELREEQAGFRPERSCSDQIN-LLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSS 236
K V + + Q GFR + +Q++ ++ LE + + V F+D ++AFD V W
Sbjct: 342 KDVTKAIPKFQFGFRLQHGTPEQLHRVVNFALEAMENKEYAVGA-FLDIQQAFDRV-WHP 399
Query: 235 I*TVLKKKGVPDKLINVIKALYYGSSCRVLHRGKLTDNIVVTAGVKQGCLLSPLLFIMVL 56
K+ P +L V+K+ + V G + + AGV QG +L P L+ +
Sbjct: 400 GLLYKAKRLFPPQLYLVVKSFLEERTFHVSVDGYKSSIKPIAAGVPQGSVLGPTLYSVFA 459
Query: 55 DDV 47
D+
Sbjct: 460 SDM 462
>U14101-2|AAC46494.1| 1084|Drosophila melanogaster putative reverse
transcriptase protein.
Length = 1084
Score = 39.1 bits (87), Expect = 0.004
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = -2
Query: 382 QAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*TVLKKKGVP 203
Q GFR E QI + + + E + +F+D +AFD V W + K +P
Sbjct: 593 QFGFRKEHGSEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRV-WHEGLLLKLAKILP 651
Query: 202 DKLINVIKALYYGSSCRVLHR-GKLTDNIVVTAGVKQGCLLSPLLFIMVLDDV 47
L ++++ + V + G+ + + AGV QG L PLL+ + D+
Sbjct: 652 YNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDM 704
>M14954-2|AAA70222.2| 1219|Drosophila melanogaster putative ORF2
protein.
Length = 1219
Score = 39.1 bits (87), Expect = 0.004
Identities = 30/122 (24%), Positives = 57/122 (46%)
Frame = -2
Query: 418 WPKWVDSELREEQAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWS 239
W ++ + ++Q GF+ +S SD + + ++ + +M + TL DF +AFD V
Sbjct: 531 WLVTYNNLINDKQFGFKKGKSTSDCLLYVDYLITK-SKMHTSLVTL--DFSRAFDRVGVH 587
Query: 238 SI*TVLKKKGVPDKLINVIKALYYGSSCRVLHRGKLTDNIVVTAGVKQGCLLSPLLFIMV 59
SI L++ K+I IK V + + + G+ QG +S +LF++
Sbjct: 588 SIIQQLQEWKTGPKIIKYIKNFMSNRKITVRVGPHTSSPLPLFNGIPQGSPISVILFLIA 647
Query: 58 LD 53
+
Sbjct: 648 FN 649
>AY600955-2|AAT12845.1| 1092|Drosophila melanogaster pol protein
protein.
Length = 1092
Score = 39.1 bits (87), Expect = 0.004
Identities = 30/113 (26%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = -2
Query: 382 QAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*TVLKKKGVP 203
Q GFR E QI + + + E + +F+D +AFD V W + K +P
Sbjct: 605 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRV-WHEGLLLKLAKILP 663
Query: 202 DKLINVIKALYYGSSCRVLHR-GKLTDNIVVTAGVKQGCLLSPLLFIMVLDDV 47
L ++++ + V + G+ + + AGV QG L PLL+ + D+
Sbjct: 664 YNLYIILESYLTNRTFEVKDQAGETSRTGQIGAGVPQGSNLGPLLYSIFSSDM 716
>U02279-1|AAA18301.1| 964|Drosophila melanogaster protein (
Drosophila melanogastertelomere-associated transposons
TART, TART-A and HeT-A,and TART-A ORF2 gene, partial
cds. ).
Length = 964
Score = 37.5 bits (83), Expect = 0.011
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = -2
Query: 382 QAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*TVLKKKGVP 203
Q GFR E QI + + + E + +F+D +AFD V W + K +P
Sbjct: 477 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRV-WHEGLLLKLAKILP 535
Query: 202 DKLINVIKALYYGSSCRVLHR-GKLTDNIVVTAGVKQGCLLSPLLFIMVLDDV 47
L ++++ + V + G+ + + AGV QG L P+L+ + D+
Sbjct: 536 YNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDM 588
>AY561850-2|AAS68534.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 37.5 bits (83), Expect = 0.011
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = -2
Query: 382 QAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*TVLKKKGVP 203
Q GFR E QI + + + E + +F+D +AFD V W + K +P
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRV-WHEGLLLKLAKILP 651
Query: 202 DKLINVIKALYYGSSCRVLHR-GKLTDNIVVTAGVKQGCLLSPLLFIMVLDDV 47
L ++++ + V + G+ + + AGV QG L P+L+ + D+
Sbjct: 652 YNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDM 704
>AY035777-2|AAK77971.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 37.5 bits (83), Expect = 0.011
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = -2
Query: 382 QAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*TVLKKKGVP 203
Q GFR E QI + + + E + +F+D +AFD V W + K +P
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRV-WHEGLLLKLAKILP 651
Query: 202 DKLINVIKALYYGSSCRVLHR-GKLTDNIVVTAGVKQGCLLSPLLFIMVLDDV 47
L ++++ + V + G+ + + AGV QG L P+L+ + D+
Sbjct: 652 YNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDM 704
>AM040245-1|CAJ13341.1| 1042|Drosophila melanogaster pol protein
protein.
Length = 1042
Score = 37.5 bits (83), Expect = 0.011
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = -2
Query: 382 QAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*TVLKKKGVP 203
Q GFR E QI + + + E + +F+D +AFD V W + K +P
Sbjct: 555 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRV-WHEGLLLKLAKILP 613
Query: 202 DKLINVIKALYYGSSCRVLHR-GKLTDNIVVTAGVKQGCLLSPLLFIMVLDDV 47
L ++++ + V + G+ + + AGV QG L P+L+ + D+
Sbjct: 614 YNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDM 666
>AJ566116-2|CAD92793.1| 1080|Drosophila melanogaster pol protein
protein.
Length = 1080
Score = 37.5 bits (83), Expect = 0.011
Identities = 29/113 (25%), Positives = 51/113 (45%), Gaps = 1/113 (0%)
Frame = -2
Query: 382 QAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*TVLKKKGVP 203
Q GFR E QI + + + E + +F+D +AFD V W + K +P
Sbjct: 593 QFGFRKEHGTEQQIARVTQFILEAFERKEYCSAVFLDISEAFDRV-WHEGLLLKLAKILP 651
Query: 202 DKLINVIKALYYGSSCRVLHR-GKLTDNIVVTAGVKQGCLLSPLLFIMVLDDV 47
L ++++ + V + G+ + + AGV QG L P+L+ + D+
Sbjct: 652 YNLYIILESYLTNRTFEVKDQAGETSRAGQIGAGVPQGSNLGPILYSIFSSDM 704
>AJ278684-2|CAB99192.1| 989|Drosophila melanogaster
endonuclease/reverse transcriptase protein.
Length = 989
Score = 37.5 bits (83), Expect = 0.011
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = -2
Query: 298 CEVFTLFIDFEKAFDNVSWSSI*TVLKKKGVPDKLINVIKALYYGSSC-RVLHRGKLTDN 122
C + TL D + AF+ W I ++ GVPD + VI + V G +
Sbjct: 551 CAIITL--DVKNAFNTARWPIILGAMRNLGVPDYIRGVIGNYFRDRVLWYVTEDGPRSHQ 608
Query: 121 IVVTAGVKQGCLLSPLLFIMVLDDVM 44
V+AGV QG +L P+L+ ++ D ++
Sbjct: 609 --VSAGVPQGSVLGPILWNIMYDGIL 632
>AM040243-1|CAJ13339.1| 656|Drosophila melanogaster pol protein
protein.
Length = 656
Score = 37.1 bits (82), Expect = 0.014
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = -2
Query: 382 QAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*TVLKKKGVP 203
Q GFR + Q+ + + + + + F+D +AFD V W + +P
Sbjct: 149 QFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRV-WHDGLLYKLSRLIP 207
Query: 202 DKLINVIKALYYGSSCRVLHRGKLTDNIV-VTAGVKQGCLLSPLLFIMVLDDV 47
L ++++ + V G+ T I + AGV QG +L P+L+ + D+
Sbjct: 208 RYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDM 260
>AM040242-2|CAJ13338.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.1 bits (82), Expect = 0.014
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = -2
Query: 382 QAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*TVLKKKGVP 203
Q GFR + Q+ + + + + + F+D +AFD V W + +P
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRV-WHDGLLYKLSRLIP 654
Query: 202 DKLINVIKALYYGSSCRVLHRGKLTDNIV-VTAGVKQGCLLSPLLFIMVLDDV 47
L ++++ + V G+ T I + AGV QG +L P+L+ + D+
Sbjct: 655 RYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDM 707
>AJ542582-2|CAD65871.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.1 bits (82), Expect = 0.014
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = -2
Query: 382 QAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*TVLKKKGVP 203
Q GFR + Q+ + + + + + F+D +AFD V W + +P
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRV-WHDGLLYKLSRLIP 654
Query: 202 DKLINVIKALYYGSSCRVLHRGKLTDNIV-VTAGVKQGCLLSPLLFIMVLDDV 47
L ++++ + V G+ T I + AGV QG +L P+L+ + D+
Sbjct: 655 RYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDM 707
>AJ542581-2|CAD65869.1| 1103|Drosophila melanogaster pol protein
protein.
Length = 1103
Score = 37.1 bits (82), Expect = 0.014
Identities = 27/113 (23%), Positives = 50/113 (44%), Gaps = 1/113 (0%)
Frame = -2
Query: 382 QAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*TVLKKKGVP 203
Q GFR + Q+ + + + + + F+D +AFD V W + +P
Sbjct: 596 QFGFRKDHGAEHQLARVTQFILKAFDEKDVCSATFLDITEAFDRV-WHDGLLYKLSRLIP 654
Query: 202 DKLINVIKALYYGSSCRVLHRGKLTDNIV-VTAGVKQGCLLSPLLFIMVLDDV 47
L ++++ + V G+ T I + AGV QG +L P+L+ + D+
Sbjct: 655 RYLFDLLENYLSNRTFSVRIDGETTSRIGNIRAGVPQGSILGPVLYSIYSSDM 707
>AY060323-1|AAL25362.1| 241|Drosophila melanogaster GH20809p
protein.
Length = 241
Score = 34.7 bits (76), Expect = 0.077
Identities = 25/112 (22%), Positives = 47/112 (41%)
Frame = -2
Query: 382 QAGFRPERSCSDQINLLRMILEQCQEMQCEVFTLFIDFEKAFDNVSWSSI*TVLKKKGVP 203
Q F + +Q+N + + E + LF+D +AFD V W + +P
Sbjct: 85 QFDFPAKHGAIEQVNRITTEIRTAFEHREYCTALFLDVAQAFDRV-WLDGLMFKIIQLLP 143
Query: 202 DKLINVIKALYYGSSCRVLHRGKLTDNIVVTAGVKQGCLLSPLLFIMVLDDV 47
+ ++K+ V + + + AGV QG +L P+L+ + D+
Sbjct: 144 QNIHKLLKSYLDKRVFAVRCSSSTSSDFTIEAGVPQGSVLGPILYTLYTADI 195
>AY071627-1|AAL49249.1| 511|Drosophila melanogaster RE67487p
protein.
Length = 511
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 131 KFSPVEYSTRRSIVKGFYDIYELVGHAFFLQNSSNAGPTDIVKSLFEVDKQCE 289
+F P+ Y + ++K ++ VGH + N + TD S F++DK+ E
Sbjct: 290 QFKPIRYY--KEVIKSMRKMHISVGHNTVMANVTLFRDTDGTTSTFQLDKEYE 340
>AE013599-3196|AAF46721.1| 511|Drosophila melanogaster CG9841-PA
protein.
Length = 511
Score = 29.1 bits (62), Expect = 3.8
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +2
Query: 131 KFSPVEYSTRRSIVKGFYDIYELVGHAFFLQNSSNAGPTDIVKSLFEVDKQCE 289
+F P+ Y + ++K ++ VGH + N + TD S F++DK+ E
Sbjct: 290 QFKPIRYY--KEVIKSMRKMHISVGHNTVMANVTLFRDTDGTTSTFQLDKEYE 340
>U86010-1|AAB95640.1| 1920|Drosophila melanogaster zinc-finger
nuclear protein hindsightprotein.
Length = 1920
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 83 QQATLLD-ACGDHDIIRKFSPVEYSTRRSIVKGFYDIYELVGHAFFLQNSSNAGPT 247
Q + ++D + GD +RK + S GF D GH+ +L NSS+A T
Sbjct: 134 QASIVMDYSSGDASSLRKKFRLNRSAASLSESGFVDASSTTGHSGYLGNSSSATNT 189
>AY058335-1|AAL13564.1| 1893|Drosophila melanogaster GH10905p
protein.
Length = 1893
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 83 QQATLLD-ACGDHDIIRKFSPVEYSTRRSIVKGFYDIYELVGHAFFLQNSSNAGPT 247
Q + ++D + GD +RK + S GF D GH+ +L NSS+A T
Sbjct: 134 QASIVMDYSSGDASSLRKKFRLNRSAASLSESGFVDASSTTGHSGYLGNSSSATNT 189
>AL031227-3|CAA20227.1| 1891|Drosophila melanogaster
EG:66A1.1,FBgn0003053;peb protein.
Length = 1891
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 83 QQATLLD-ACGDHDIIRKFSPVEYSTRRSIVKGFYDIYELVGHAFFLQNSSNAGPT 247
Q + ++D + GD +RK + S GF D GH+ +L NSS+A T
Sbjct: 134 QASIVMDYSSGDASSLRKKFRLNRSAASLSESGFVDASSTTGHSGYLGNSSSATNT 189
>AE014298-646|AAX52476.1| 1894|Drosophila melanogaster CG12212-PB,
isoform B protein.
Length = 1894
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 83 QQATLLD-ACGDHDIIRKFSPVEYSTRRSIVKGFYDIYELVGHAFFLQNSSNAGPT 247
Q + ++D + GD +RK + S GF D GH+ +L NSS+A T
Sbjct: 134 QASIVMDYSSGDASSLRKKFRLNRSAASLSESGFVDASSTTGHSGYLGNSSSATNT 189
>AE014298-645|AAF45960.2| 1894|Drosophila melanogaster CG12212-PA,
isoform A protein.
Length = 1894
Score = 28.3 bits (60), Expect = 6.7
Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Frame = +2
Query: 83 QQATLLD-ACGDHDIIRKFSPVEYSTRRSIVKGFYDIYELVGHAFFLQNSSNAGPT 247
Q + ++D + GD +RK + S GF D GH+ +L NSS+A T
Sbjct: 134 QASIVMDYSSGDASSLRKKFRLNRSAASLSESGFVDASSTTGHSGYLGNSSSATNT 189
>AE013599-3144|AAM70856.1| 980|Drosophila melanogaster CG30389-PC,
isoform C protein.
Length = 980
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +3
Query: 351 EHERSGLNPACSSLSSLSTHFGHPHQQNFRENF*TN 458
EH SG A SS SS S H H H N N +N
Sbjct: 259 EHHHSGGAGASSSSSSNSNHHHHHHHNNSSGNSGSN 294
>AE013599-3143|AAF46685.2| 980|Drosophila melanogaster CG30389-PA,
isoform A protein.
Length = 980
Score = 28.3 bits (60), Expect = 6.7
Identities = 16/36 (44%), Positives = 17/36 (47%)
Frame = +3
Query: 351 EHERSGLNPACSSLSSLSTHFGHPHQQNFRENF*TN 458
EH SG A SS SS S H H H N N +N
Sbjct: 259 EHHHSGGAGASSSSSSNSNHHHHHHHNNSSGNSGSN 294
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,010,336
Number of Sequences: 53049
Number of extensions: 512308
Number of successful extensions: 1622
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1516
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1604
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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