Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329B03f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex det...    23   1.4  
DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex det...    23   1.4  
DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex det...    23   1.4  
DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex det...    23   1.4  
DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex det...    23   1.4  
DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex det...    23   1.4  
DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex det...    23   1.4  
AF069739-1|AAC63272.2|  690|Apis mellifera translation initiatio...    23   1.9  
DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex det...    23   2.5  
DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex det...    23   2.5  
DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex det...    23   2.5  
DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex det...    23   2.5  
DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex det...    23   2.5  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   2.5  
AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone este...    22   4.4  
AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.           22   4.4  
DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex det...    21   5.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    21   7.7  
AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                21   7.7  

>DQ325121-1|ABD14135.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 390 LSSLSTHFGHPHQQNFRENF*TNW 461
           +SSLS ++ + +  N+  N+ TN+
Sbjct: 82  ISSLSNNYKYSNYNNYNNNYNTNY 105


>DQ325120-1|ABD14134.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 390 LSSLSTHFGHPHQQNFRENF*TNW 461
           +SSLS ++ + +  N+  N+ TN+
Sbjct: 82  ISSLSNNYKYSNYNNYNNNYNTNY 105


>DQ325119-1|ABD14133.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 390 LSSLSTHFGHPHQQNFRENF*TNW 461
           +SSLS ++ + +  N+  N+ TN+
Sbjct: 82  ISSLSNNYKYSNYNNYNNNYNTNY 105


>DQ325118-1|ABD14132.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 390 LSSLSTHFGHPHQQNFRENF*TNW 461
           +SSLS ++ + +  N+  N+ TN+
Sbjct: 82  ISSLSNNYKYSNYNNYNNNYNTNY 105


>DQ325117-1|ABD14131.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 390 LSSLSTHFGHPHQQNFRENF*TNW 461
           +SSLS ++ + +  N+  N+ TN+
Sbjct: 82  ISSLSNNYKYSNYNNYNNNYNTNY 105


>DQ325116-1|ABD14130.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 390 LSSLSTHFGHPHQQNFRENF*TNW 461
           +SSLS ++ + +  N+  N+ TN+
Sbjct: 82  ISSLSNNYKYSNYNNYNNNYNTNY 105


>DQ325114-1|ABD14128.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/24 (33%), Positives = 16/24 (66%)
 Frame = +3

Query: 390 LSSLSTHFGHPHQQNFRENF*TNW 461
           +SSLS ++ + +  N+  N+ TN+
Sbjct: 82  ISSLSNNYKYSNYNNYNNNYNTNY 105


>AF069739-1|AAC63272.2|  690|Apis mellifera translation initiation
           factor 2 protein.
          Length = 690

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -2

Query: 142 RGKLTDNIVVTAGVKQGCLL 83
           RGKL   ++    +K+GCLL
Sbjct: 333 RGKLVTALIQRGTLKKGCLL 352


>DQ325082-1|ABD14096.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 348 SEHERSGLNPACSSLSSLSTHFGHPHQQNFREN 446
           +E ERS      SSLS+ + H  + ++ N+  N
Sbjct: 71  TERERSREPKIISSLSNKTIHNNNNYKYNYNNN 103


>DQ325081-1|ABD14095.1|  186|Apis mellifera complementary sex
           determiner protein.
          Length = 186

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 348 SEHERSGLNPACSSLSSLSTHFGHPHQQNFREN 446
           +E ERS      SSLS+ + H  + ++ N+  N
Sbjct: 71  TERERSREPKIISSLSNRTIHNNNNYKYNYNNN 103


>DQ325080-1|ABD14094.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 348 SEHERSGLNPACSSLSSLSTHFGHPHQQNFREN 446
           +E ERS      SSLS+ + H  + ++ N+  N
Sbjct: 71  TERERSREPKIISSLSNKTIHNNNNYKYNYNNN 103


>DQ325079-1|ABD14093.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 348 SEHERSGLNPACSSLSSLSTHFGHPHQQNFREN 446
           +E ERS      SSLS+ + H  + ++ N+  N
Sbjct: 71  TERERSREPKIISSLSNKTIHNNNNYKYNYNNN 103


>DQ325078-1|ABD14092.1|  184|Apis mellifera complementary sex
           determiner protein.
          Length = 184

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 348 SEHERSGLNPACSSLSSLSTHFGHPHQQNFREN 446
           +E ERS      SSLS+ + H  + ++ N+  N
Sbjct: 71  TERERSREPKIISSLSNKTIHNNNNYKYNYNNN 103


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 2.5
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +3

Query: 348 SEHERSGLNPACSSLSSLSTHFGHPHQQNFREN 446
           +E ERS      SSLS+ + H  + ++ N+  N
Sbjct: 304 TERERSREPKIISSLSNKTIHNNNNYKYNYNNN 336


>AY647436-1|AAU81605.1|  567|Apis mellifera juvenile hormone
           esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 374 PCLLFSELTVNP 409
           PCL +++L VNP
Sbjct: 84  PCLQYTQLPVNP 95


>AB083009-1|BAC54130.1|  567|Apis mellifera esterase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 7/12 (58%), Positives = 10/12 (83%)
 Frame = +2

Query: 374 PCLLFSELTVNP 409
           PCL +++L VNP
Sbjct: 84  PCLQYTQLPVNP 95


>DQ325083-1|ABD14097.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 348 SEHERSGLNPACSSLSSLSTHFGHPHQQNFRENF 449
           +E ERS      SSLS+ + H  + ++ N+   +
Sbjct: 71  TERERSREPKIISSLSNKTIHNNNNYKYNYNNKY 104


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 182 YDIYELVGHAFFLQNSSNAGPTDIVKSLFE 271
           YD+ +     F   NS NAG + I ++L E
Sbjct: 406 YDVRDGCRTPFQWDNSINAGFSKIAENLLE 435


>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 7/15 (46%), Positives = 9/15 (60%)
 Frame = +2

Query: 464 AGLYPSSWHTRKGHP 508
           AG  P S+H  + HP
Sbjct: 309 AGFLPPSYHPHQHHP 323


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,287
Number of Sequences: 438
Number of extensions: 3120
Number of successful extensions: 21
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)