Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS329B02f
(521 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006791-5|AAF60739.1| 330|Caenorhabditis elegans Hypothetical ... 43 2e-04
AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical ... 42 4e-04
AF016677-6|AAB66145.3| 340|Caenorhabditis elegans Hypothetical ... 40 0.001
U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF016677-8|AAB66140.3| 310|Caenorhabditis elegans Hypothetical ... 36 0.013
AF016677-3|AAL11110.2| 216|Caenorhabditis elegans Hypothetical ... 36 0.023
U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger pr... 35 0.031
AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical ... 35 0.031
AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical ... 35 0.031
Z78413-3|CAB01659.1| 202|Caenorhabditis elegans Hypothetical pr... 33 0.094
U88308-11|AAB42321.1| 154|Caenorhabditis elegans Hypothetical p... 33 0.094
AF025464-4|AAB71017.3| 310|Caenorhabditis elegans Mnat (menage ... 33 0.094
Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical pr... 33 0.12
U41026-1|AAM51522.2| 101|Caenorhabditis elegans Hypothetical pr... 33 0.12
AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical ... 33 0.12
AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical ... 33 0.12
AC026301-1|AAK68897.1| 280|Caenorhabditis elegans Hypothetical ... 33 0.12
AF016677-7|AAB66144.1| 292|Caenorhabditis elegans Hypothetical ... 33 0.16
AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical ... 32 0.22
AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical ... 32 0.22
AF016677-4|AAL11109.2| 304|Caenorhabditis elegans Hypothetical ... 32 0.29
AC103567-8|AAL35729.1| 305|Caenorhabditis elegans Hypothetical ... 32 0.29
AF016683-9|AAB66197.1| 299|Caenorhabditis elegans Hypothetical ... 31 0.38
AF016677-5|AAB66143.1| 128|Caenorhabditis elegans Hypothetical ... 31 0.38
Z81547-2|CAB04460.1| 209|Caenorhabditis elegans Hypothetical pr... 31 0.50
Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical pr... 31 0.50
U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical p... 31 0.50
Z50070-8|CAA90397.1| 263|Caenorhabditis elegans Hypothetical pr... 31 0.66
U40421-3|AAA81439.2| 347|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical pr... 30 0.87
Z48544-4|CAA88443.3| 250|Caenorhabditis elegans Hypothetical pr... 30 0.87
AL021483-5|CAA16346.1| 255|Caenorhabditis elegans Hypothetical ... 30 0.87
AC017117-1|AAF16618.1| 338|Caenorhabditis elegans Hypothetical ... 30 0.87
U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical pr... 30 1.2
AL132948-33|CAD57708.2| 734|Caenorhabditis elegans Hypothetical... 29 1.5
AL132948-32|CAD31833.3| 731|Caenorhabditis elegans Hypothetical... 29 1.5
AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical ... 29 1.5
AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical ... 29 1.5
Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical pr... 29 2.0
AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical ... 29 2.0
AC017117-2|AAF16617.1| 295|Caenorhabditis elegans Hypothetical ... 29 2.0
Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical p... 29 2.7
U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL117202-18|CAB57896.3| 765|Caenorhabditis elegans Hypothetical... 29 2.7
AF164625-1|AAD47816.1| 944|Caenorhabditis elegans tandem-array-... 29 2.7
AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array ... 29 2.7
AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical ... 29 2.7
Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical pr... 28 3.5
Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical pr... 28 3.5
U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical pr... 28 3.5
AF031519-1|AAC78763.1| 930|Caenorhabditis elegans myotubularin ... 28 3.5
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 28 3.5
Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical pr... 28 4.7
L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein. 28 4.7
AF106580-2|AAK71369.1| 439|Caenorhabditis elegans Abnormal embr... 28 4.7
Z68298-9|CAA92606.2| 91|Caenorhabditis elegans Hypothetical pr... 27 6.2
U51997-6|AAG24064.1| 159|Caenorhabditis elegans Hypothetical pr... 27 6.2
AL021491-1|CAA16373.2| 319|Caenorhabditis elegans Hypothetical ... 27 6.2
AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical ... 27 6.2
Z81139-8|CAB03483.2| 361|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z81062-15|CAB02950.2| 361|Caenorhabditis elegans Hypothetical p... 27 8.1
Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical p... 27 8.1
Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical pr... 27 8.1
Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical pr... 27 8.1
U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab e... 27 8.1
U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finge... 27 8.1
AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical... 27 8.1
>AC006791-5|AAF60739.1| 330|Caenorhabditis elegans Hypothetical
protein Y4C6A.3 protein.
Length = 330
Score = 42.7 bits (96), Expect = 2e-04
Identities = 15/27 (55%), Positives = 20/27 (74%)
Frame = +3
Query: 435 ECGHTVCENCIRNIVKFHEPIECRICQ 515
+CGHT+CE CI+NI+K I C IC+
Sbjct: 276 KCGHTLCEGCIQNILKHSNQISCPICK 302
>AL032651-2|CAB60579.1| 272|Caenorhabditis elegans Hypothetical
protein Y6D1A.2 protein.
Length = 272
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +3
Query: 354 KCCPNCSQPYQFQILSTISKINLPLFLECGHTVCENCIRNIVKFHEPIECRICQK 518
+ C CS+ Y+ +K +P L+CGHT+C CI I K EP +C +K
Sbjct: 181 RMCEICSREYED------TKERVPRVLDCGHTICHECITRIHKPTEPFKCPFDRK 229
>AF016677-6|AAB66145.3| 340|Caenorhabditis elegans Hypothetical
protein ZK1240.2 protein.
Length = 340
Score = 39.9 bits (89), Expect = 0.001
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 399 STISKINLPLFLECGHTVCENCIRNIVKFHEPIECRICQK 518
ST++ +N+P L CGHT C C +++ + I C C++
Sbjct: 14 STLTDVNIPRILRCGHTTCHGCAEKLLR-NSTILCPFCRE 52
>U80442-6|AAB37669.1| 294|Caenorhabditis elegans Hypothetical
protein T20F5.7 protein.
Length = 294
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/38 (42%), Positives = 20/38 (52%)
Frame = +3
Query: 408 SKINLPLFLECGHTVCENCIRNIVKFHEPIECRICQKC 521
+K P L CGHTVCE C N+ F+ P+ C C
Sbjct: 24 TKTRKPKVLHCGHTVCEECTDNLRDFNAPLLVVRCPTC 61
>AF016677-8|AAB66140.3| 310|Caenorhabditis elegans Hypothetical
protein ZK1240.1 protein.
Length = 310
Score = 36.3 bits (80), Expect = 0.013
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +3
Query: 399 STISKINLPLFLECGHTVCENCIRNIVKFHEPIECRICQK 518
S++++ +P L+CGH+VC+ C ++K + I C C++
Sbjct: 15 SSVNEDQVPRILKCGHSVCQCCATKLLK-NSAISCPFCRE 53
>AF016677-3|AAL11110.2| 216|Caenorhabditis elegans Hypothetical
protein ZK1240.9 protein.
Length = 216
Score = 35.5 bits (78), Expect = 0.023
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = +3
Query: 360 CPNCSQPYQFQILSTISKINLPLFLECGHTVCENCIRNIV 479
C C++ Y S I + ++P L+CGH+VC+NC ++
Sbjct: 6 CEVCNEDY-----SDIDEDHIPKVLKCGHSVCQNCATQLI 40
>U97193-14|AAB52442.2| 381|Caenorhabditis elegans Ring finger
protein protein 1 protein.
Length = 381
Score = 35.1 bits (77), Expect = 0.031
Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = +3
Query: 360 CPNCSQPYQFQILSTISKINLPLFLECGHTVCENCIRNIVKF-HEP-IECRICQ 515
C C QP+ L L CGHT C CIRN+ + + P +EC C+
Sbjct: 22 CQVCYQPFN-------ETTKLARSLHCGHTFCTECIRNVQNYGNSPHLECPTCR 68
>AL021487-5|CAA16350.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.9 protein.
Length = 244
Score = 35.1 bits (77), Expect = 0.031
Identities = 22/88 (25%), Positives = 43/88 (48%)
Frame = +3
Query: 219 NISI*SDKTEIDLLTIRKMFPLK*SKVIAKIFKVVKMEPIYLETKKCCPNCSQPYQFQIL 398
++S+ +K E L TIRK + + A ++ +++ LE +K L
Sbjct: 123 SVSMLLEKDE-QLKTIRKEMKIMDDERSAFDQELTRLKTSRLENEKSSLASRVECTICYL 181
Query: 399 STISKINLPLFLECGHTVCENCIRNIVK 482
S ++ +P ++CGHT+C C+ I++
Sbjct: 182 SYDNEARVPRVMKCGHTICHTCVDRIIE 209
>AL021487-4|CAA16351.1| 244|Caenorhabditis elegans Hypothetical
protein Y45F10B.8 protein.
Length = 244
Score = 35.1 bits (77), Expect = 0.031
Identities = 22/88 (25%), Positives = 43/88 (48%)
Frame = +3
Query: 219 NISI*SDKTEIDLLTIRKMFPLK*SKVIAKIFKVVKMEPIYLETKKCCPNCSQPYQFQIL 398
++S+ +K E L TIRK + + A ++ +++ LE +K L
Sbjct: 123 SVSMLLEKDE-QLKTIRKEMKIMDDERSAFDQELTRLKTSRLENEKSSLASRVECTICYL 181
Query: 399 STISKINLPLFLECGHTVCENCIRNIVK 482
S ++ +P ++CGHT+C C+ I++
Sbjct: 182 SYDNEARVPRVMKCGHTICHTCVDRIIE 209
>Z78413-3|CAB01659.1| 202|Caenorhabditis elegans Hypothetical
protein T01C3.3 protein.
Length = 202
Score = 33.5 bits (73), Expect = 0.094
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 420 LPLFLECGHTVCENCIRNIVK 482
+P ++CGHT+C+ CI IVK
Sbjct: 146 IPRVMDCGHTLCDFCINQIVK 166
>U88308-11|AAB42321.1| 154|Caenorhabditis elegans Hypothetical
protein C32E8.1 protein.
Length = 154
Score = 33.5 bits (73), Expect = 0.094
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 408 SKINLPLFLECGHTVCENCIRNIVKFHEPIECRICQK 518
S + +P L CGHT+C C NI++ ++ I C +K
Sbjct: 98 SGMTVPRVLPCGHTICTECAGNIIQ-NKMIRCPFDRK 133
>AF025464-4|AAB71017.3| 310|Caenorhabditis elegans Mnat (menage a
trois) tfiih subunitprotein 1 protein.
Length = 310
Score = 33.5 bits (73), Expect = 0.094
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +3
Query: 435 ECGHTVCENCIRNIVKFHEPIECRICQK 518
ECGH +C+NC+ NI + C +C +
Sbjct: 23 ECGHPLCKNCVDNIFALNSG-NCHVCNR 49
>Z81111-6|CAB03269.1| 332|Caenorhabditis elegans Hypothetical
protein T01G5.7 protein.
Length = 332
Score = 33.1 bits (72), Expect = 0.12
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +3
Query: 345 ETKKCCPNCSQPYQFQILSTISKINLPLFLECGHTVCENCI 467
E++K CP C Y ++ LP ++CGHT+C CI
Sbjct: 185 ESRKECPICCWNYD-------NEDRLPRVMDCGHTMCHTCI 218
>U41026-1|AAM51522.2| 101|Caenorhabditis elegans Hypothetical
protein C28G1.5 protein.
Length = 101
Score = 33.1 bits (72), Expect = 0.12
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +3
Query: 387 FQILSTISKINLPLFLECGHTVCENCIRNIVKFHEPIECRICQ 515
F S ++P L CGH +C CI +V + +EC C+
Sbjct: 10 FDRFSDTDSEHIPRNLTCGHALCHKCITAMVN-NSTVECPFCR 51
>AF099919-6|AAC68803.1| 261|Caenorhabditis elegans Hypothetical
protein F40G9.14 protein.
Length = 261
Score = 33.1 bits (72), Expect = 0.12
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIVKFHEPIECRIC 512
P CGHT CE+CI+ + K I+C C
Sbjct: 153 PRVFNCGHTYCESCIQ-VCKHQFQIKCPFC 181
Score = 27.5 bits (58), Expect = 6.2
Identities = 17/52 (32%), Positives = 25/52 (48%)
Frame = +3
Query: 360 CPNCSQPYQFQILSTISKINLPLFLECGHTVCENCIRNIVKFHEPIECRICQ 515
C +C Y Q T +I+ P CGH+VCE+C K + E R+ +
Sbjct: 210 CTSCQLTYSSQ---TFPRIH-P---SCGHSVCEDCKEPFCKICKTEEDRVVE 254
>AF016666-6|AAB66086.1| 292|Caenorhabditis elegans Hypothetical
protein B0281.8 protein.
Length = 292
Score = 33.1 bits (72), Expect = 0.12
Identities = 12/32 (37%), Positives = 21/32 (65%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIVKFHEPIECRICQK 518
P L+C HT+CE CI+ ++K + + C C++
Sbjct: 23 PRNLKCSHTLCEGCIKKLLK-NGRVVCPFCRE 53
>AC026301-1|AAK68897.1| 280|Caenorhabditis elegans Hypothetical
protein Y54F10BM.6 protein.
Length = 280
Score = 33.1 bits (72), Expect = 0.12
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = +3
Query: 360 CPNCSQPYQFQILSTISKINLPLFLECGHTVCENCIRNIVKFHEPIECRICQ 515
C C + Y Q +S ++ + CGHT CE C+ + + + C C+
Sbjct: 146 CQTCRKKYSSQDVSRTPRV----YSTCGHTSCEACVESDFTQKKRVVCLTCE 193
>AF016677-7|AAB66144.1| 292|Caenorhabditis elegans Hypothetical
protein ZK1240.8 protein.
Length = 292
Score = 32.7 bits (71), Expect = 0.16
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +3
Query: 360 CPNCSQPYQFQILSTISKINLPLFLECGHTVCENCIRNIV 479
C C++ Y S + + P L+CGH++C+NC ++
Sbjct: 6 CEVCNEDY-----SNLDESRAPRVLKCGHSICQNCAVKLI 40
>AF024499-3|AAB70357.1| 374|Caenorhabditis elegans Hypothetical
protein F42G2.5 protein.
Length = 374
Score = 32.3 bits (70), Expect = 0.22
Identities = 12/39 (30%), Positives = 23/39 (58%)
Frame = +3
Query: 399 STISKINLPLFLECGHTVCENCIRNIVKFHEPIECRICQ 515
S++ +P L+CGH++C++C + K + I C C+
Sbjct: 142 SSVVDNQIPRILQCGHSICQSCASKLAK-NCVILCPFCR 179
>AF016666-4|AAB66082.1| 331|Caenorhabditis elegans Hypothetical
protein B0281.3 protein.
Length = 331
Score = 32.3 bits (70), Expect = 0.22
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIVKFHEPIECRICQK 518
P L+C HT+CE CI+ ++ + I C C++
Sbjct: 52 PRNLKCCHTLCEGCIKKLLNYSR-IVCPFCRE 82
>AF016677-4|AAL11109.2| 304|Caenorhabditis elegans Hypothetical
protein ZK1240.3 protein.
Length = 304
Score = 31.9 bits (69), Expect = 0.29
Identities = 15/53 (28%), Positives = 27/53 (50%)
Frame = +3
Query: 360 CPNCSQPYQFQILSTISKINLPLFLECGHTVCENCIRNIVKFHEPIECRICQK 518
C C + Y S I + + P L+CGH++C+ C ++ + I C C++
Sbjct: 6 CEICCKEY-----SNIDQNHSPKILKCGHSICQICAAKLIT-NSCIYCPFCRE 52
>AC103567-8|AAL35729.1| 305|Caenorhabditis elegans Hypothetical
protein Y51F10.2 protein.
Length = 305
Score = 31.9 bits (69), Expect = 0.29
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +3
Query: 417 NLPLFLECGHTVCENCI 467
+LP L+C HTVCE CI
Sbjct: 31 HLPKILQCAHTVCERCI 47
>AF016683-9|AAB66197.1| 299|Caenorhabditis elegans Hypothetical
protein K09F6.7 protein.
Length = 299
Score = 31.5 bits (68), Expect = 0.38
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIVKFHEPIECRICQK 518
P L+C HT+CE CI+ ++ + I C C++
Sbjct: 22 PRNLKCSHTLCEGCIKKMLG-NSKIVCPFCRE 52
>AF016677-5|AAB66143.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1240.6 protein.
Length = 128
Score = 31.5 bits (68), Expect = 0.38
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +3
Query: 360 CPNCSQPYQFQILSTISKINLPLFLECGHTVCENCIRNIVKFHEPIECRIC 512
C C++ Y S + + ++P L CGH++C++C + + I C+ C
Sbjct: 6 CKVCNENY-----SDVDESHVPRVLTCGHSICQSCAAKQMS-NSLILCKTC 50
>Z81547-2|CAB04460.1| 209|Caenorhabditis elegans Hypothetical
protein F53F8.3 protein.
Length = 209
Score = 31.1 bits (67), Expect = 0.50
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIVKFHEPIECRICQ 515
P L CGHT+C C++ IV I+C C+
Sbjct: 158 PRVLGCGHTMCMGCVQKIVG-QGYIKCPFCR 187
>Z19156-1|CAA79563.1| 160|Caenorhabditis elegans Hypothetical
protein T02C1.1 protein.
Length = 160
Score = 31.1 bits (67), Expect = 0.50
Identities = 11/31 (35%), Positives = 19/31 (61%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIVKFHEPIECRICQ 515
P +ECGH+ C CI + + +E +C +C+
Sbjct: 18 PCIIECGHSYCRFCIESHLNINE--KCPLCR 46
>U97193-12|AAB52441.1| 283|Caenorhabditis elegans Hypothetical
protein C06A5.8a protein.
Length = 283
Score = 31.1 bits (67), Expect = 0.50
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Frame = +3
Query: 432 LECGHTVCENCIRNIVKFHEP--IECRICQ 515
L CGHT C CI+ + K+ +EC C+
Sbjct: 55 LHCGHTFCTECIKTMQKYGNSAYLECPSCR 84
>Z50070-8|CAA90397.1| 263|Caenorhabditis elegans Hypothetical
protein F43G6.8 protein.
Length = 263
Score = 30.7 bits (66), Expect = 0.66
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 420 LPLFLECGHTVCENCIRNIVKFHEPIECRICQ 515
+P L CGHT+C +CI + + I C C+
Sbjct: 213 VPRVLVCGHTLCTSCIEKL-DVGDGIRCPFCR 243
>U40421-3|AAA81439.2| 347|Caenorhabditis elegans Hypothetical
protein C02B8.6 protein.
Length = 347
Score = 30.7 bits (66), Expect = 0.66
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +3
Query: 417 NLPLFLECGHTVCENCIRNIVKFHEPIECRICQK 518
N P+ L+C H C CI+ ++ ++ + C +C++
Sbjct: 13 NRPVRLDCNHEFCYICIKGSIQ-NDMLNCAVCRR 45
>Z70208-5|CAA94134.1| 201|Caenorhabditis elegans Hypothetical
protein F54B11.5 protein.
Length = 201
Score = 30.3 bits (65), Expect = 0.87
Identities = 11/30 (36%), Positives = 15/30 (50%)
Frame = +3
Query: 426 LFLECGHTVCENCIRNIVKFHEPIECRICQ 515
L L C H C CI N +++ C IC+
Sbjct: 139 LLLPCLHAFCIRCIANEMEYRHDFSCPICK 168
>Z48544-4|CAA88443.3| 250|Caenorhabditis elegans Hypothetical
protein ZK945.5 protein.
Length = 250
Score = 30.3 bits (65), Expect = 0.87
Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 354 KCCPNCSQPYQFQILSTISKINLPLFL-ECGHTVCENCIRNIVKFHEPIEC 503
+C P C Q S K+ +P L ECGHT+C C I I C
Sbjct: 5 RCFPECG--ICGQEYSEDEKLLIPRILTECGHTICTGCAGKIKGQSSIIAC 53
>AL021483-5|CAA16346.1| 255|Caenorhabditis elegans Hypothetical
protein Y38H8A.2a protein.
Length = 255
Score = 30.3 bits (65), Expect = 0.87
Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Frame = +3
Query: 432 LECGHTVCENCIRNIVK-FHEPIECR-ICQKC 521
LECGH C+ CI NI K H +C + KC
Sbjct: 77 LECGHGYCKKCIPNIKKDAHTLTKCPVVAVKC 108
>AC017117-1|AAF16618.1| 338|Caenorhabditis elegans Hypothetical
protein F43C11.8 protein.
Length = 338
Score = 30.3 bits (65), Expect = 0.87
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 7/67 (10%)
Frame = +3
Query: 339 YLETKKCCPNCSQPYQFQILSTISKINLPLFLE-------CGHTVCENCIRNIVKFHEPI 497
++E + C + S I +SK+ LP FL+ CGHT+C C +++ + I
Sbjct: 3 FIECEICNEDFSSATDENIPRILSKLLLP-FLKLKNKNSGCGHTICHGCAEKLLQ-NSMI 60
Query: 498 ECRICQK 518
C C++
Sbjct: 61 LCPFCRE 67
>U23516-3|AAG38881.1| 218|Caenorhabditis elegans Hypothetical
protein B0416.4 protein.
Length = 218
Score = 29.9 bits (64), Expect = 1.2
Identities = 16/52 (30%), Positives = 24/52 (46%)
Frame = +3
Query: 321 VKMEPIYLETKKCCPNCSQPYQFQILSTISKINLPLFLECGHTVCENCIRNI 476
+K E + E + C C+ Y S K P+ L CGH +C +CI +
Sbjct: 142 MKKENVEFEWRSCFI-CTMEY-----SRTDKNLHPIILNCGHNLCRSCINKL 187
>AL132948-33|CAD57708.2| 734|Caenorhabditis elegans Hypothetical
protein Y39B6A.43b protein.
Length = 734
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 364 PIAAN-LINFKYFQLYQRSTYHCSWNVVTLFVKI 462
P+ +N I+FK F YQ+ Y +W +++ F K+
Sbjct: 243 PLYSNRAIDFKGFSTYQKKNYFENWKILSSFKKV 276
>AL132948-32|CAD31833.3| 731|Caenorhabditis elegans Hypothetical
protein Y39B6A.43a protein.
Length = 731
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
Frame = +1
Query: 364 PIAAN-LINFKYFQLYQRSTYHCSWNVVTLFVKI 462
P+ +N I+FK F YQ+ Y +W +++ F K+
Sbjct: 240 PLYSNRAIDFKGFSTYQKKNYFENWKILSSFKKV 273
>AF099919-4|AAC68791.1| 230|Caenorhabditis elegans Hypothetical
protein F40G9.12 protein.
Length = 230
Score = 29.5 bits (63), Expect = 1.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIVKFHEPI 497
P L CGHT CE CI+ + +
Sbjct: 34 PRVLSCGHTYCEICIQELASLRNNV 58
Score = 27.9 bits (59), Expect = 4.7
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIV 479
P L CGH+ C CI+ +V
Sbjct: 182 PRVLNCGHSCCGGCIKKLV 200
>AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.14 protein.
Length = 468
Score = 29.5 bits (63), Expect = 1.5
Identities = 12/36 (33%), Positives = 17/36 (47%)
Frame = +3
Query: 360 CPNCSQPYQFQILSTISKINLPLFLECGHTVCENCI 467
CP C + + Q P + CGH++CE CI
Sbjct: 10 CPVCQEEFDDQ--------KAPFIISCGHSLCETCI 37
>Z47808-2|CAA87770.1| 415|Caenorhabditis elegans Hypothetical
protein D2013.2 protein.
Length = 415
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/66 (25%), Positives = 28/66 (42%), Gaps = 7/66 (10%)
Frame = +3
Query: 345 ETKKCCPNCSQPYQFQILSTISKINLPL----FLECGHTVCENCIRNIVKFHE---PIEC 503
+T CC C+QP+ + + + + + L CG VC +C N + +
Sbjct: 287 KTSDCCQKCNQPFFWNLQAMWQRKVVGLRQHHCRTCGSAVCGSCCDNWTTYPPMGYETKI 346
Query: 504 RICQKC 521
RIC C
Sbjct: 347 RICNDC 352
>AF067611-1|AAC19182.1| 603|Caenorhabditis elegans Hypothetical
protein C45G7.4 protein.
Length = 603
Score = 29.1 bits (62), Expect = 2.0
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIVKFHE-----PIECRICQK 518
P L CGH CE+CI ++ E I+C C++
Sbjct: 38 PKLLPCGHNFCESCIFSLCLHQEYYLLDSIKCPTCRR 74
>AC017117-2|AAF16617.1| 295|Caenorhabditis elegans Hypothetical
protein F43C11.7 protein.
Length = 295
Score = 29.1 bits (62), Expect = 2.0
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 360 CPNCSQPYQFQILSTISKINLPLFLECGHTVCENCIRNIVKFHEPIECRICQK 518
C C++ Y S + P L CGH++C+ C +V + I C C+K
Sbjct: 6 CGVCTEDY-----SNVITNRHPKNLTCGHSICKACSSKLVS-NFKILCPFCRK 52
>Z46934-12|CAA87044.3| 539|Caenorhabditis elegans Hypothetical
protein ZK1320.6 protein.
Length = 539
Score = 28.7 bits (61), Expect = 2.7
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 438 CGHTVCENCIRNIVKFHEPIEC 503
CGHT+C NC +I + I C
Sbjct: 28 CGHTICHNCAISIAGRNSSIFC 49
>U41026-2|AAM51523.1| 295|Caenorhabditis elegans Hypothetical
protein C28G1.6 protein.
Length = 295
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/37 (29%), Positives = 20/37 (54%)
Frame = +3
Query: 408 SKINLPLFLECGHTVCENCIRNIVKFHEPIECRICQK 518
S+ +P L CGH +C C + + E ++C C++
Sbjct: 15 SESRIPKNLNCGHVICPVCASKLFENPE-VKCPTCRQ 50
>AL117202-18|CAB57896.3| 765|Caenorhabditis elegans Hypothetical
protein Y47D3A.22 protein.
Length = 765
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 414 INLPLFLECGHTVCENCIRNIVKFHEPIECRICQK 518
+ + + CGHT C +C + K +C IC+K
Sbjct: 726 LKIAVVFNCGHTACVDCADKLKK-----QCHICRK 755
>AF164625-1|AAD47816.1| 944|Caenorhabditis elegans
tandem-array-modifier protein protein.
Length = 944
Score = 28.7 bits (61), Expect = 2.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIV 479
P+ + CGHT+C CI +V
Sbjct: 31 PMQMGCGHTLCSTCIGRLV 49
>AF022974-6|AAC48041.1| 944|Caenorhabditis elegans Tandem array
expression modifierprotein 1 protein.
Length = 944
Score = 28.7 bits (61), Expect = 2.7
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIV 479
P+ + CGHT+C CI +V
Sbjct: 31 PMQMGCGHTLCSTCIGRLV 49
>AC024808-1|AAK29927.1| 309|Caenorhabditis elegans Hypothetical
protein Y53G8AM.4 protein.
Length = 309
Score = 28.7 bits (61), Expect = 2.7
Identities = 11/23 (47%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Frame = +3
Query: 417 NLPLFL-ECGHTVCENCIRNIVK 482
++P FL CGHT C+ C I+K
Sbjct: 250 SVPRFLFACGHTYCDECCNTILK 272
>Z49072-2|CAB61017.2| 1006|Caenorhabditis elegans Hypothetical
protein T24A11.1b protein.
Length = 1006
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +3
Query: 438 CGHTVCENCIRN---IVKFHEPIECRICQKC 521
CG VCE+C +N +++ + ++ R C C
Sbjct: 848 CGRVVCEDCSKNRFSVIEEGKSVQKRACDSC 878
>Z49072-1|CAA88884.1| 938|Caenorhabditis elegans Hypothetical
protein T24A11.1a protein.
Length = 938
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +3
Query: 438 CGHTVCENCIRN---IVKFHEPIECRICQKC 521
CG VCE+C +N +++ + ++ R C C
Sbjct: 821 CGRVVCEDCSKNRFSVIEEGKSVQKRACDSC 851
>U80442-5|AAB37668.2| 794|Caenorhabditis elegans Hypothetical
protein T20F5.6 protein.
Length = 794
Score = 28.3 bits (60), Expect = 3.5
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = +3
Query: 420 LPLFLECGHTVCENCIRNIV 479
+P CGHT+C CI+ ++
Sbjct: 129 IPKVFPCGHTICLQCIKKLL 148
>AF031519-1|AAC78763.1| 930|Caenorhabditis elegans myotubularin
homologous protein 1 protein.
Length = 930
Score = 28.3 bits (60), Expect = 3.5
Identities = 10/31 (32%), Positives = 18/31 (58%), Gaps = 3/31 (9%)
Frame = +3
Query: 438 CGHTVCENCIRN---IVKFHEPIECRICQKC 521
CG VCE+C +N +++ + ++ R C C
Sbjct: 848 CGRVVCEDCSKNRFSVIEEGKSVQKRACDSC 878
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 28.3 bits (60), Expect = 3.5
Identities = 13/35 (37%), Positives = 22/35 (62%), Gaps = 1/35 (2%)
Frame = +3
Query: 417 NLPLFLE-CGHTVCENCIRNIVKFHEPIECRICQK 518
+LP LE CGHT C +C+ + +K + C +C++
Sbjct: 46 HLPKLLENCGHTFCYSCLFDWLKSQD--TCPMCRE 78
>Z66495-6|CAA91275.2| 547|Caenorhabditis elegans Hypothetical
protein C36A4.8 protein.
Length = 547
Score = 27.9 bits (59), Expect = 4.7
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIVKFHEPIECRICQ 515
P+ C H C +CI + ++C IC+
Sbjct: 31 PILSTCFHIFCRSCINACFERKRKVQCPICR 61
>L26987-1|AAA62312.1| 627|Caenorhabditis elegans par-2 protein.
Length = 627
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIVKFHEPIECRICQ 515
P+ + CGH+ CE CI + + C IC+
Sbjct: 66 PVMVTCGHSYCEPCIERHTR--DTRACVICK 94
>AF106580-2|AAK71369.1| 439|Caenorhabditis elegans Abnormal
embryonic partitioningof cytoplasm protein 2, isoform a
protein.
Length = 439
Score = 27.9 bits (59), Expect = 4.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIVKFHEPIECRICQ 515
P+ + CGH+ CE CI + + C IC+
Sbjct: 66 PVMVTCGHSYCEPCIERHTR--DTRACVICK 94
>Z68298-9|CAA92606.2| 91|Caenorhabditis elegans Hypothetical
protein F44D12.10 protein.
Length = 91
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/43 (27%), Positives = 20/43 (46%)
Frame = +3
Query: 354 KCCPNCSQPYQFQILSTISKINLPLFLECGHTVCENCIRNIVK 482
+ C C+ PY+ + P L C HT+C +C + V+
Sbjct: 41 RICEICAAPYREDAMRA------PRVLPCDHTICTDCAGHFVQ 77
>U51997-6|AAG24064.1| 159|Caenorhabditis elegans Hypothetical
protein F19G12.1 protein.
Length = 159
Score = 27.5 bits (58), Expect = 6.2
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIVKFHE-PIECRIC 512
P C HT C+ CIR I H ++C C
Sbjct: 110 PKVFSCLHTYCDACIREISSRHNGEMKCPEC 140
>AL021491-1|CAA16373.2| 319|Caenorhabditis elegans Hypothetical
protein Y44A6B.1 protein.
Length = 319
Score = 27.5 bits (58), Expect = 6.2
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = -2
Query: 328 IFTTLKILAITLDYFKGNI-LRIVNKSISVLSD*IEMFVLYFRRTPT 191
+F ++ ++ L Y N+ +RI N LS+ I ++ Y R TPT
Sbjct: 234 LFQSISTTSVLLLYEVSNLFIRIFNAEYMSLSEDIRRWMFYIRVTPT 280
>AF101310-1|AAC69216.2| 765|Caenorhabditis elegans Hypothetical
protein C39F7.2 protein.
Length = 765
Score = 27.5 bits (58), Expect = 6.2
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIVKFHEP 494
P+ L CGH++C C +K H+P
Sbjct: 17 PIILTCGHSLCRMC---ALKAHQP 37
>Z81139-8|CAB03483.2| 361|Caenorhabditis elegans Hypothetical
protein W05H5.7 protein.
Length = 361
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 375 QPYQFQILSTISKINLPLFLECGH 446
+P+QFQILS+I I L ++ C H
Sbjct: 24 EPFQFQILSSI--IELVFYISCFH 45
>Z81062-15|CAB02950.2| 361|Caenorhabditis elegans Hypothetical
protein W05H5.7 protein.
Length = 361
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +3
Query: 375 QPYQFQILSTISKINLPLFLECGH 446
+P+QFQILS+I I L ++ C H
Sbjct: 24 EPFQFQILSSI--IELVFYISCFH 45
>Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical
protein C08H9.4b protein.
Length = 465
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = -1
Query: 503 AFNGFVKLDNVSNTIFTNSVTTFQEQW*VD 414
+F+G V + S T+F NS+ +F E++ +D
Sbjct: 193 SFSGLV-FNETSRTVFVNSIVSFVEKYDID 221
>Z48809-9|CAA88749.1| 1270|Caenorhabditis elegans Hypothetical
protein T01E8.5 protein.
Length = 1270
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -2
Query: 211 YFRRTPTVGAHWPIKKNSLLLFQVLIRYEIA--EYHKKKNAFTLEIQ 77
+FR P VG +W I+ LL I ++ + +K+AFT E++
Sbjct: 309 FFRYVPPVGGYWKIRDRVDLLNLDHIDDDVLANDSDNRKDAFTFELE 355
>Z48583-5|CAA88473.1| 1270|Caenorhabditis elegans Hypothetical
protein T01E8.5 protein.
Length = 1270
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -2
Query: 211 YFRRTPTVGAHWPIKKNSLLLFQVLIRYEIA--EYHKKKNAFTLEIQ 77
+FR P VG +W I+ LL I ++ + +K+AFT E++
Sbjct: 309 FFRYVPPVGGYWKIRDRVDLLNLDHIDDDVLANDSDNRKDAFTFELE 355
>U13070-7|AAC46638.1| 414|Caenorhabditis elegans Rabaptin (rab
effector) protein 5 protein.
Length = 414
Score = 27.1 bits (57), Expect = 8.1
Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 4/34 (11%)
Frame = +3
Query: 423 PLFLECGHTVCENCIRNIVKF---HEPIE-CRIC 512
P L CG C NC+++ V H P C++C
Sbjct: 364 PHCLHCGRIFCMNCLKDTVPSGPNHRPANVCKVC 397
>U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finger
b-box coiled coil)domain containing protein 2 protein.
Length = 1032
Score = 27.1 bits (57), Expect = 8.1
Identities = 14/46 (30%), Positives = 22/46 (47%)
Frame = +3
Query: 330 EPIYLETKKCCPNCSQPYQFQILSTISKINLPLFLECGHTVCENCI 467
EP+ + CP C Q ++ P L+C H++CE+CI
Sbjct: 52 EPLPEDDHASCPYCQQDFR-----------KPRVLDCLHSMCEDCI 86
>AL117195-25|CAB55036.1| 1048|Caenorhabditis elegans Hypothetical
protein Y57A10A.31 protein.
Length = 1048
Score = 27.1 bits (57), Expect = 8.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 432 LECGHTVCENCIRNIVK 482
LECGH +C CI ++
Sbjct: 820 LECGHVMCRTCINTQIR 836
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,292,942
Number of Sequences: 27780
Number of extensions: 253753
Number of successful extensions: 774
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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