Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329B02f
         (521 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   1.1  
AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phospha...    22   3.3  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    22   4.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    22   4.4  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    21   5.8  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    21   7.7  

>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 426 LFLECGHTVCENCIRNIVKFHEPIECR 506
           L +EC   + E  +  +++ +EPIECR
Sbjct: 150 LIIECSLNL-ETYLDKLIEKNEPIECR 175


>AF023666-1|AAC14552.1|  363|Apis mellifera sn-glycerol-3-phosphate
           dehydrogenase protein.
          Length = 363

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 8/20 (40%), Positives = 13/20 (65%)
 Frame = +1

Query: 346 KQKNVVPIAANLINFKYFQL 405
           K KN+ PI  +L+   YF++
Sbjct: 171 KDKNMAPILKDLMETSYFKV 190


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/36 (25%), Positives = 19/36 (52%)
 Frame = -2

Query: 217 VLYFRRTPTVGAHWPIKKNSLLLFQVLIRYEIAEYH 110
           +LYF       AH+ ++     +FQV  +++  +Y+
Sbjct: 9   ILYFSIVCQAKAHYSLRDFKANIFQVKYQWKYFDYN 44


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
 Frame = +3

Query: 330 EPIYLETKKC-CPNCSQPYQFQILSTISKINLPLFL 434
           E  Y ET    C  C Q + +QI +T+    +PLF+
Sbjct: 183 EHTYSETGPSHCVVC-QNFFYQIYATLGSFYIPLFV 217


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 21.4 bits (43), Expect = 5.8
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = +1

Query: 403 LYQRSTYHCSWNVVTLFVKIVLETLSSFTNPL 498
           LY+R  +   W +VTL V  ++  +    N L
Sbjct: 54  LYERVEWSGPWILVTLIVLAIVNVMVVLGNVL 85


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 9/24 (37%), Positives = 14/24 (58%)
 Frame = +2

Query: 383 SISNTFNYIKDQLTIVPGMWSHCL 454
           +IS+  N+  D    V G+W +CL
Sbjct: 573 NISHFINHSCDPNLAVYGVWINCL 596


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,918
Number of Sequences: 438
Number of extensions: 2970
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14600229
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)