Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329A10f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ133776-1|CAB45384.1|  214|Homo sapiens neurogenin 3 protein.         32   1.1  
BC126468-1|AAI26469.1|  214|Homo sapiens neurogenin 3 protein.         32   1.4  
BC117488-1|AAI17489.1|  214|Homo sapiens neurogenin 3 protein.         32   1.4  
BC074939-1|AAH74939.1|  214|Homo sapiens neurogenin 3 protein.         32   1.4  
BC074938-1|AAH74938.1|  214|Homo sapiens neurogenin 3 protein.         32   1.4  
BC069098-1|AAH69098.1|  214|Homo sapiens neurogenin 3 protein.         32   1.4  
AL450311-1|CAH72729.1|  214|Homo sapiens neurogenin 3 protein.         32   1.4  
AF234829-1|AAK15022.1|  214|Homo sapiens neurogenin 3 protein.         32   1.4  
M94132-1|AAA59164.1|  984|Homo sapiens MUC2 protein.                   31   3.2  
L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.                  31   3.2  
AF263918-1|AAF73293.1|  910|Homo sapiens inner nuclear membrane ...    29   9.9  
AF112299-1|AAD31593.2|  911|Homo sapiens integral inner nuclear ...    29   9.9  

>AJ133776-1|CAB45384.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 269 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSKSPANSPL 448
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTPGNCAEAEEGGCRGAPRKLRA 63

Query: 449 RRHFSEPPR 475
           RR     P+
Sbjct: 64  RRGGRSRPK 72


>BC126468-1|AAI26469.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 269 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSKSPANSPL 448
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 449 RRHFSEPPR 475
           RR     P+
Sbjct: 64  RRGGRSRPK 72


>BC117488-1|AAI17489.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 269 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSKSPANSPL 448
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 449 RRHFSEPPR 475
           RR     P+
Sbjct: 64  RRGGRSRPK 72


>BC074939-1|AAH74939.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 269 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSKSPANSPL 448
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 449 RRHFSEPPR 475
           RR     P+
Sbjct: 64  RRGGRSRPK 72


>BC074938-1|AAH74938.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 269 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSKSPANSPL 448
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 449 RRHFSEPPR 475
           RR     P+
Sbjct: 64  RRGGRSRPK 72


>BC069098-1|AAH69098.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 269 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSKSPANSPL 448
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 449 RRHFSEPPR 475
           RR     P+
Sbjct: 64  RRGGRSRPK 72


>AL450311-1|CAH72729.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 269 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSKSPANSPL 448
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 449 RRHFSEPPR 475
           RR     P+
Sbjct: 64  RRGGRSRPK 72


>AF234829-1|AAK15022.1|  214|Homo sapiens neurogenin 3 protein.
          Length = 214

 Score = 31.9 bits (69), Expect = 1.4
 Identities = 21/69 (30%), Positives = 27/69 (39%)
 Frame = +2

Query: 269 QKAGIAVLLCTHTPERGLRSCTEDGRCTPCS*RRSPFGTVPAAAEIQAGGCSKSPANSPL 448
           Q +G   +  T   ER     +ED    P S   SP  T    AE + GGC  +P     
Sbjct: 4   QPSGAPTVQVTRETERSFPRASEDEVTCPTSAPPSPTRTRGNCAEAEEGGCRGAPRKLRA 63

Query: 449 RRHFSEPPR 475
           RR     P+
Sbjct: 64  RRGGRSRPK 72


>M94132-1|AAA59164.1|  984|Homo sapiens MUC2 protein.
          Length = 984

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 347 CTPCS*RRSPFGTVPAAAEIQAGGCSKS 430
           CTP +  R P  TVP   E+   GC+K+
Sbjct: 870 CTPRNETRVPCSTVPVTTEVSYAGCTKT 897


>L21998-1|AAB95295.1| 5179|Homo sapiens mucin protein.
          Length = 5179

 Score = 30.7 bits (66), Expect = 3.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +2

Query: 347  CTPCS*RRSPFGTVPAAAEIQAGGCSKS 430
            CTP +  R P  TVP   E+   GC+K+
Sbjct: 5065 CTPRNETRVPCSTVPVTTEVSYAGCTKT 5092


>AF263918-1|AAF73293.1|  910|Homo sapiens inner nuclear membrane
           protein protein.
          Length = 910

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = -3

Query: 471 GGSEK*RRSGEFAGLLLHPPAWISAAAGTVPNG-ERRQEH---GVHRPSSVQERRP 316
           GG  K R S ++ GL   PPA ++A+  T  N  ERR+ H   G  RP+  + + P
Sbjct: 156 GGGRKDRASLQYRGLKA-PPAPLAASEVTNSNSAERRKPHSWWGARRPAGPELQTP 210


>AF112299-1|AAD31593.2|  911|Homo sapiens integral inner nuclear
           membrane protein MAN1 protein.
          Length = 911

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = -3

Query: 471 GGSEK*RRSGEFAGLLLHPPAWISAAAGTVPNG-ERRQEH---GVHRPSSVQERRP 316
           GG  K R S ++ GL   PPA ++A+  T  N  ERR+ H   G  RP+  + + P
Sbjct: 156 GGGRKDRASLQYRGLKA-PPAPLAASEVTNSNSAERRKPHSWWGARRPAGPELQTP 210


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,667,769
Number of Sequences: 237096
Number of extensions: 1783933
Number of successful extensions: 4368
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4225
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4365
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)