Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329A09f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64231-1|AAA60574.1|  302|Homo sapiens spermidine synthase protein.    54   4e-07
M34338-1|AAA36633.1|  302|Homo sapiens spermidine synthase protein.    54   4e-07
BC033106-1|AAH33106.1|  302|Homo sapiens spermidine synthase pro...    54   4e-07
BC000309-1|AAH00309.1|  302|Homo sapiens spermidine synthase pro...    54   4e-07
AL109811-6|CAI22104.1|  302|Homo sapiens spermidine synthase pro...    54   4e-07
AB209417-1|BAD92654.1|  503|Homo sapiens zinc finger protein 519...    33   0.80 
BC024227-1|AAH24227.1|  540|Homo sapiens zinc finger protein 519...    32   1.1  
Z49099-1|CAA88921.1|  368|Homo sapiens spermine synthase protein.      31   2.4  
U53331-1|AAD08634.1|  349|Homo sapiens spermidine aminopropyltra...    31   2.4  
BC085621-1|AAH85621.1|  366|Homo sapiens spermine synthase protein.    31   2.4  
BC009898-1|AAH09898.1|  366|Homo sapiens spermine synthase protein.    31   2.4  
AD001528-1|AAB61308.1|  366|Homo sapiens spermidine aminopropylt...    31   2.4  

>M64231-1|AAA60574.1|  302|Homo sapiens spermidine synthase protein.
          Length = 302

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 18/45 (40%), Positives = 32/45 (71%)
 Frame = +2

Query: 368 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSFG 502
           ++  WF E+C +WPG   S +V+++LH  +S+YQ+I VF + ++G
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYG 60


>M34338-1|AAA36633.1|  302|Homo sapiens spermidine synthase protein.
          Length = 302

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 18/45 (40%), Positives = 32/45 (71%)
 Frame = +2

Query: 368 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSFG 502
           ++  WF E+C +WPG   S +V+++LH  +S+YQ+I VF + ++G
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYG 60


>BC033106-1|AAH33106.1|  302|Homo sapiens spermidine synthase
           protein.
          Length = 302

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 18/45 (40%), Positives = 32/45 (71%)
 Frame = +2

Query: 368 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSFG 502
           ++  WF E+C +WPG   S +V+++LH  +S+YQ+I VF + ++G
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYG 60


>BC000309-1|AAH00309.1|  302|Homo sapiens spermidine synthase
           protein.
          Length = 302

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 18/45 (40%), Positives = 32/45 (71%)
 Frame = +2

Query: 368 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSFG 502
           ++  WF E+C +WPG   S +V+++LH  +S+YQ+I VF + ++G
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYG 60


>AL109811-6|CAI22104.1|  302|Homo sapiens spermidine synthase
           protein.
          Length = 302

 Score = 53.6 bits (123), Expect = 4e-07
 Identities = 18/45 (40%), Positives = 32/45 (71%)
 Frame = +2

Query: 368 LKTNWFTESCDMWPGGTFSFEVKEVLHTEKSKYQNIQVFDTTSFG 502
           ++  WF E+C +WPG   S +V+++LH  +S+YQ+I VF + ++G
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYG 60


>AB209417-1|BAD92654.1|  503|Homo sapiens zinc finger protein 519
           variant protein.
          Length = 503

 Score = 32.7 bits (71), Expect = 0.80
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 255 CIPCSKYKNSFRPSYELNITELTFHNHDIYVQRYDSIH 142
           CIP +KY++ F  S   N  ++ F NHD  + ++ S H
Sbjct: 102 CIPMNKYQHKFLKSVFCNKNQINF-NHDSNISKHHSTH 138


>BC024227-1|AAH24227.1|  540|Homo sapiens zinc finger protein 519
           protein.
          Length = 540

 Score = 32.3 bits (70), Expect = 1.1
 Identities = 14/38 (36%), Positives = 22/38 (57%)
 Frame = -3

Query: 255 CIPCSKYKNSFRPSYELNITELTFHNHDIYVQRYDSIH 142
           CIP +KY++ F  S   N  ++ F NHD  + ++ S H
Sbjct: 139 CIPMNKYQHKFLKSVFCNKNQINF-NHDSDISKHHSTH 175


>Z49099-1|CAA88921.1|  368|Homo sapiens spermine synthase protein.
          Length = 368

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = +2

Query: 404 WP---GGTFSFEVKEVLHTEKSKYQNIQVFDTTSFG 502
           WP   G    +++ EV++ E S YQNI++  +  FG
Sbjct: 126 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFG 161


>U53331-1|AAD08634.1|  349|Homo sapiens spermidine
           aminopropyltransferase protein.
          Length = 349

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = +2

Query: 404 WP---GGTFSFEVKEVLHTEKSKYQNIQVFDTTSFG 502
           WP   G    +++ EV++ E S YQNI++  +  FG
Sbjct: 107 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFG 142


>BC085621-1|AAH85621.1|  366|Homo sapiens spermine synthase protein.
          Length = 366

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = +2

Query: 404 WP---GGTFSFEVKEVLHTEKSKYQNIQVFDTTSFG 502
           WP   G    +++ EV++ E S YQNI++  +  FG
Sbjct: 124 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFG 159


>BC009898-1|AAH09898.1|  366|Homo sapiens spermine synthase protein.
          Length = 366

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = +2

Query: 404 WP---GGTFSFEVKEVLHTEKSKYQNIQVFDTTSFG 502
           WP   G    +++ EV++ E S YQNI++  +  FG
Sbjct: 124 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFG 159


>AD001528-1|AAB61308.1|  366|Homo sapiens spermidine
           aminopropyltransferase protein.
          Length = 366

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 13/36 (36%), Positives = 21/36 (58%), Gaps = 3/36 (8%)
 Frame = +2

Query: 404 WP---GGTFSFEVKEVLHTEKSKYQNIQVFDTTSFG 502
           WP   G    +++ EV++ E S YQNI++  +  FG
Sbjct: 124 WPTADGRLVEYDIDEVVYDEDSPYQNIKILHSKQFG 159


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,316,469
Number of Sequences: 237096
Number of extensions: 1430545
Number of successful extensions: 2662
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2571
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2662
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)