Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS329A04f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 97 6e-21
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 97 6e-21
08_02_0657 - 19749835-19751942,19753123-19753561 37 0.011
04_04_0545 + 26141335-26141793,26141883-26141981 32 0.24
09_04_0029 - 13932414-13933416,13933821-13933903 29 1.7
09_01_0117 + 1808669-1809181,1810038-1810059,1810170-1810223,181... 29 2.3
08_01_0601 - 5268520-5271112,5272448-5272950 29 2.3
07_03_1170 - 24505743-24505875,24506087-24506475,24507133-245073... 29 2.3
11_05_0075 + 18856659-18856878,18856890-18857107,18858253-188583... 28 4.0
12_01_0442 + 3495333-3496484 28 5.2
10_08_0433 - 17889072-17889632,17890437-17890514,17892196-17892393 27 6.9
09_04_0030 + 13940168-13940250,13940703-13941714 27 6.9
04_03_0980 + 21406822-21409496,21410322-21410376 27 6.9
03_01_0408 + 3151984-3152666,3156061-3156368,3157594-3157946 27 6.9
02_05_0771 - 31628535-31629133,31629223-31629987,31630808-316309... 27 6.9
01_06_0280 + 28129750-28129868,28130677-28131145,28133605-281338... 27 6.9
12_02_1167 + 26647293-26648356,26648493-26648577,26649129-266491... 27 9.1
12_02_1166 + 26643045-26644078,26644238-26644322,26646800-26646937 27 9.1
07_03_1144 + 24331104-24331292,24331387-24331611,24332133-243325... 27 9.1
06_02_0363 - 15172528-15173224,15174564-15174856 27 9.1
02_04_0366 - 22389591-22390527,22391296-22391429,22391762-223918... 27 9.1
02_03_0391 - 18471625-18472125 27 9.1
01_01_0268 - 2214923-2215048,2215131-2215286,2215371-2215469,221... 27 9.1
>10_08_0170 + 15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 97.5 bits (232), Expect = 6e-21
Identities = 55/110 (50%), Positives = 64/110 (58%)
Frame = -1
Query: 518 AIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSVSDNDIRKY 339
AIR+ IE +I RER M+ DE D + EI AHFEE+MK+ARRSVSD DIRKY
Sbjct: 713 AIRENIEKDIERERRSKENPE--AMEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKY 770
Query: 338 EMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQPTFQEEGGDDDLYS 189
+ FAQTLQQSRGFG+ FRF + DDDLYS
Sbjct: 771 QAFAQTLQQSRGFGSEFRFERTEAGAGAAADPFASAAAVAD---DDDLYS 817
>03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 97.5 bits (232), Expect = 6e-21
Identities = 55/110 (50%), Positives = 64/110 (58%)
Frame = -1
Query: 518 AIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSVSDNDIRKY 339
AIR+ IE +I E+ R M+ DE D + EI AHFEE+MK+ARRSVSD DIRKY
Sbjct: 704 AIRENIEKDIEMEKRRKDNPE--AMEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKY 761
Query: 338 EMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQPTFQEEGGDDDLYS 189
+ FAQTLQQSRGFGT FRF + DDDLYS
Sbjct: 762 QAFAQTLQQSRGFGTEFRFADQPASGAGAAADPFASAAAAAD--DDDLYS 809
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 36.7 bits (81), Expect = 0.011
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -1
Query: 416 EISRAHFEEAMKFARRSVSDNDIRKYEMF 330
E++ HF+ AMK AR+SVS+ D+ KYE F
Sbjct: 731 ELTVDHFKSAMKHARKSVSELDVIKYEYF 759
>04_04_0545 + 26141335-26141793,26141883-26141981
Length = 185
Score = 32.3 bits (70), Expect = 0.24
Identities = 23/92 (25%), Positives = 41/92 (44%)
Frame = +3
Query: 162 PRSRARHSLAVQVVVTPLLLERGLVAR*STRAPCSSRVCWESEVGSEAAALLQGLREHLV 341
P + R LA ++ + LLL + R+ + G EA A+++ +LV
Sbjct: 37 PPATGRRRLAASLLASQLLLLPAAATSVAGAFEFDLRITVPEQSGEEAEAVVKLHARNLV 96
Query: 342 LADVVVGHGAARELHRLLEVSAANLRNGVFLV 437
++ + REL L SAANL+ ++ +
Sbjct: 97 RVKGLIDARSWRELQAALRSSAANLKQDLYAI 128
>09_04_0029 - 13932414-13933416,13933821-13933903
Length = 361
Score = 29.5 bits (63), Expect = 1.7
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = -2
Query: 259 GARVLQRATSPRSRRRGVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTWR 80
G RV +TSP RR + + ++RD G + T +L+ A P P +
Sbjct: 202 GMRVTVISTSPGKRREALEHLGADEFLVSRDAGQMAAAAGTMDGILNTVSAWHPVAPLFA 261
Query: 79 L 77
L
Sbjct: 262 L 262
>09_01_0117 +
1808669-1809181,1810038-1810059,1810170-1810223,
1810684-1810892
Length = 265
Score = 29.1 bits (62), Expect = 2.3
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = -2
Query: 247 LQRATSPRSRRRGVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRP-TTPTWRLAP 71
L R PR R R T T + R +PP + TR LSV P+ P P+ +A
Sbjct: 17 LSRTPPPRRRLRLRTPTPCHRASTTRRALHTPPHQRTRLPPLSVAPSASPLLNPSIHVAA 76
Query: 70 AGS 62
A S
Sbjct: 77 APS 79
>08_01_0601 - 5268520-5271112,5272448-5272950
Length = 1031
Score = 29.1 bits (62), Expect = 2.3
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 336 LVLADVVVGHGAARELHR-LLEVSAANLRNGVFLVHVHNGSGGL 464
LV D G AA +H+ +L+ + A R+ FL HVH+G+ GL
Sbjct: 550 LVETDAAGGRVAAVSVHQAVLDFAQAEARDTNFL-HVHSGAAGL 592
>07_03_1170 -
24505743-24505875,24506087-24506475,24507133-24507369,
24507967-24508136,24510196-24510316
Length = 349
Score = 29.1 bits (62), Expect = 2.3
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 150 GGDAPRSRARHSLAVQVVVTPL 215
GGDA ++ HSL+V V+V+PL
Sbjct: 211 GGDADTTQLYHSLSVPVIVSPL 232
>11_05_0075 +
18856659-18856878,18856890-18857107,18858253-18858319,
18858706-18859397
Length = 398
Score = 28.3 bits (60), Expect = 4.0
Identities = 36/114 (31%), Positives = 50/114 (43%), Gaps = 7/114 (6%)
Frame = +3
Query: 69 AGARRHVGVV--GRHAGQTDRTLVLVYRDGGDAPRSRARHSLAVQVVVTPLLLERGLVAR 242
AG R G + G H G+ RT L+ A R AVQ +VTP ++A+
Sbjct: 251 AGRRAIAGRLAKGEH-GRRRRTGGLLPDSAATARRRVEGGDAAVQGIVTPSQESELVIAK 309
Query: 243 *STRAPCSSRV-CWESEVGSEAAALLQGL---REHLVLADV-VVGHGAARELHR 389
+ + WE + G+EA ALL+ L + L LA+ V GA E R
Sbjct: 310 TGDVIASTYYMRAWERDAGAEADALLEELWNVKAKLELAETKAVAAGALSEKAR 363
>12_01_0442 + 3495333-3496484
Length = 383
Score = 27.9 bits (59), Expect = 5.2
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -2
Query: 226 RSRRRGVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTW 83
RS G +T C A R +G+ P R + PA P +P W
Sbjct: 132 RSGPMGRSTLCNACGVRLRAVGSLPEHRAPAARTTTAAPASPPDSPIW 179
>10_08_0433 - 17889072-17889632,17890437-17890514,17892196-17892393
Length = 278
Score = 27.5 bits (58), Expect = 6.9
Identities = 11/36 (30%), Positives = 19/36 (52%)
Frame = +3
Query: 9 AAVCLELHVRCLRHYRIREPAGARRHVGVVGRHAGQ 116
A C +V+C+ + +RE R+H V +AG+
Sbjct: 190 ALYCGVCNVKCMTRFNLREHEAGRKHRDKVASNAGE 225
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 27.5 bits (58), Expect = 6.9
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = -2
Query: 259 GARVLQRATSPRSRRRGVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTWR 80
G RV +TSP R+ + + ++RD G + T +L+ A P P +
Sbjct: 205 GMRVTVISTSPGKRQEALEHLGADEFLVSRDAGQMAAAAATMDGILNTVSAWHPIAPLFS 264
Query: 79 L 77
L
Sbjct: 265 L 265
>04_03_0980 + 21406822-21409496,21410322-21410376
Length = 909
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +3
Query: 357 VGHGAARELHRLLEVSAANLRNGVFLVHVHNGSG 458
V G+ E+ + EV LR+ F+V HNGSG
Sbjct: 31 VDEGSRSEIMSVAEVIDQVLRDHKFMVAFHNGSG 64
>03_01_0408 + 3151984-3152666,3156061-3156368,3157594-3157946
Length = 447
Score = 27.5 bits (58), Expect = 6.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +2
Query: 200 RRHPPPPGTWAGRP 241
RRHPPPPG A P
Sbjct: 40 RRHPPPPGPGARNP 53
>02_05_0771 -
31628535-31629133,31629223-31629987,31630808-31630905,
31631024-31631193,31631297-31631596,31632208-31632618
Length = 780
Score = 27.5 bits (58), Expect = 6.9
Identities = 21/73 (28%), Positives = 36/73 (49%)
Frame = +3
Query: 126 TLVLVYRDGGDAPRSRARHSLAVQVVVTPLLLERGLVAR*STRAPCSSRVCWESEVGSEA 305
++ ++ + DA R + + VTPL + +G V A C+S C S +G EA
Sbjct: 424 SIAVIGHNANDATRLLGNYFGPPCISVTPLQVLQGYVKDTRFLAGCNSAACNVSSIG-EA 482
Query: 306 AALLQGLREHLVL 344
A L + +++VL
Sbjct: 483 AQLASSV-DYVVL 494
>01_06_0280 +
28129750-28129868,28130677-28131145,28133605-28133802,
28134168-28134412,28134749-28134907,28135491-28135578,
28135983-28136264
Length = 519
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/37 (40%), Positives = 21/37 (56%)
Frame = -1
Query: 446 MDMDEEDPVPEISRAHFEEAMKFARRSVSDNDIRKYE 336
M DE P ++ FEEA+ ++SVS DI K+E
Sbjct: 475 MSKDEISKDP-VAMCDFEEALAKVQKSVSPADIEKHE 510
>12_02_1167 +
26647293-26648356,26648493-26648577,26649129-26649191,
26649381-26649443,26649987-26650070,26650229-26650783
Length = 637
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 95 GGATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRRH-PPPPGTWAGRPL 244
GGA R R + GL W E+A+ + + + PPPG G P+
Sbjct: 280 GGAERFRRRHNAGGGLEYWLEPAELAAVRRNAGVADPYWVPPPGWKPGDPV 330
>12_02_1166 + 26643045-26644078,26644238-26644322,26646800-26646937
Length = 418
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Frame = +2
Query: 95 GGATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRRH-PPPPGTWAGRPL 244
GGA R R + GL W E+A+ + + + PPPG G P+
Sbjct: 270 GGAERFRRRHNAGGGLEYWLEPAELAAVRRKAGVADPYWVPPPGWKPGDPV 320
>07_03_1144 +
24331104-24331292,24331387-24331611,24332133-24332521,
24332762-24332856,24333300-24333673
Length = 423
Score = 27.1 bits (57), Expect = 9.1
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +3
Query: 150 GGDAPRSRARHSLAVQVVVTPLL 218
GGDA +R H L+V +V PL+
Sbjct: 173 GGDADTTRLYHLLSVPAIVAPLI 195
>06_02_0363 - 15172528-15173224,15174564-15174856
Length = 329
Score = 27.1 bits (57), Expect = 9.1
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Frame = -2
Query: 298 EPTSDSQQTRELQGARVLQRATSPRSRRRGVTTTCTAKLCL-ARDLGASPPS 146
+P +DS + L R TSPR++ + C LC A DLGASPPS
Sbjct: 208 DPPTDSGASPPLLPRR--STPTSPRTQGFCLPR-CPGVLCRPATDLGASPPS 256
>02_04_0366 -
22389591-22390527,22391296-22391429,22391762-22391816,
22392364-22393225,22393342-22393459,22393647-22393737,
22394627-22394670
Length = 746
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +3
Query: 69 AGARRHVGVVGRHAGQTDRTLVLVYRDGGDAPRSRARHSLAVQVVVTPLLLER 227
A +R HV G H G D +V+ YR G +S+ L +++ L ER
Sbjct: 40 ACSRMHVAAGGGHGGGADDGMVVDYR-GNPVDKSKTGGWLGAGLILGTELAER 91
>02_03_0391 - 18471625-18472125
Length = 166
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -3
Query: 330 RADPAAEPRLRNQLQIPNKRGSYRGHG 250
+ADPAA PR + P GS RG+G
Sbjct: 114 QADPAASPRCGARFGGPAAAGSGRGYG 140
>01_01_0268 -
2214923-2215048,2215131-2215286,2215371-2215469,
2215557-2215631,2215732-2215800,2216515-2216713,
2220162-2220267,2221117-2221588
Length = 433
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -1
Query: 419 PEISRAHFEEAMKFARRSVSDNDIRKYEMFAQ 324
P ISR FE+ + R +VS D+ +E F +
Sbjct: 396 PPISRTDFEKVLARQRPTVSKKDLEVHERFTK 427
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,479,299
Number of Sequences: 37544
Number of extensions: 375929
Number of successful extensions: 1505
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1454
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1504
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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