Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS329A04f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein. 119 5e-27
BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing prot... 119 5e-27
BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing prot... 119 5e-27
BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein. 119 5e-27
AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing prot... 119 5e-27
AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmi... 119 5e-27
AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein. 119 5e-27
BC111958-1|AAI11959.1| 710|Homo sapiens ral guanine nucleotide ... 32 1.1
BC101756-1|AAI01757.1| 710|Homo sapiens ral guanine nucleotide ... 32 1.1
BC034491-1|AAH34491.1| 406|Homo sapiens chromosome 12 open read... 32 1.1
BC027600-1|AAH27600.1| 406|Homo sapiens chromosome 12 open read... 32 1.1
BC026075-1|AAH26075.1| 406|Homo sapiens chromosome 12 open read... 32 1.1
BC024183-1|AAH24183.1| 406|Homo sapiens chromosome 12 open read... 32 1.1
AK074082-1|BAB84908.1| 497|Homo sapiens FLJ00153 protein protein. 32 1.1
U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein ... 31 1.9
U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein ... 31 1.9
BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein. 31 1.9
BX000476-1|CAI41974.1| 384|Homo sapiens protein phosphatase 2 (... 29 7.5
AL954664-1|CAI41961.1| 384|Homo sapiens protein phosphatase 2 (... 29 7.5
AL732314-1|CAI41583.1| 384|Homo sapiens protein phosphatase 2 (... 29 7.5
BC063431-1|AAH63431.1| 301|Homo sapiens hepatitis A virus cellu... 29 9.9
BC020843-1|AAH20843.1| 142|Homo sapiens HAVCR2 protein protein. 29 9.9
AY069944-1|AAL55401.1| 301|Homo sapiens putative kidney injury ... 29 9.9
AK127525-1|BAC87019.1| 150|Homo sapiens protein ( Homo sapiens ... 29 9.9
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 29 9.9
AK027334-1|BAB55044.1| 301|Homo sapiens protein ( Homo sapiens ... 29 9.9
AF450243-1|AAL65158.1| 301|Homo sapiens T cell immunoglobulin m... 29 9.9
AF450242-1|AAL65157.1| 301|Homo sapiens T cell immunoglobulin m... 29 9.9
AF251707-1|AAM19100.1| 301|Homo sapiens hepatitis A virus cellu... 29 9.9
>BC122550-1|AAI22551.1| 475|Homo sapiens VCP protein protein.
Length = 475
Score = 119 bits (287), Expect = 5e-27
Identities = 66/112 (58%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
Frame = -1
Query: 521 LAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSVSDNDIRK 342
LAIR++IE+EI RER R M+++E+DPVPEI R HFEEAM+FARRSVSDNDIRK
Sbjct: 366 LAIRESIESEIRRERERQTNPS--AMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 423
Query: 341 YEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQP--TFQEEGGDDDLY 192
YEMFAQTLQQSRGFG +FRFP+ G + E DDDLY
Sbjct: 424 YEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLY 474
>BC121794-1|AAI21795.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 119 bits (287), Expect = 5e-27
Identities = 66/112 (58%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
Frame = -1
Query: 521 LAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSVSDNDIRK 342
LAIR++IE+EI RER R M+++E+DPVPEI R HFEEAM+FARRSVSDNDIRK
Sbjct: 697 LAIRESIESEIRRERERQTNPS--AMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
Query: 341 YEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQP--TFQEEGGDDDLY 192
YEMFAQTLQQSRGFG +FRFP+ G + E DDDLY
Sbjct: 755 YEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLY 805
>BC110913-1|AAI10914.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 119 bits (287), Expect = 5e-27
Identities = 66/112 (58%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
Frame = -1
Query: 521 LAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSVSDNDIRK 342
LAIR++IE+EI RER R M+++E+DPVPEI R HFEEAM+FARRSVSDNDIRK
Sbjct: 697 LAIRESIESEIRRERERQTNPS--AMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
Query: 341 YEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQP--TFQEEGGDDDLY 192
YEMFAQTLQQSRGFG +FRFP+ G + E DDDLY
Sbjct: 755 YEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLY 805
>BC007562-1|AAH07562.2| 644|Homo sapiens VCP protein protein.
Length = 644
Score = 119 bits (287), Expect = 5e-27
Identities = 66/112 (58%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
Frame = -1
Query: 521 LAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSVSDNDIRK 342
LAIR++IE+EI RER R M+++E+DPVPEI R HFEEAM+FARRSVSDNDIRK
Sbjct: 535 LAIRESIESEIRRERERQTNPS--AMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 592
Query: 341 YEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQP--TFQEEGGDDDLY 192
YEMFAQTLQQSRGFG +FRFP+ G + E DDDLY
Sbjct: 593 YEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLY 643
>AL353795-2|CAH70993.1| 806|Homo sapiens valosin-containing protein
protein.
Length = 806
Score = 119 bits (287), Expect = 5e-27
Identities = 66/112 (58%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
Frame = -1
Query: 521 LAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSVSDNDIRK 342
LAIR++IE+EI RER R M+++E+DPVPEI R HFEEAM+FARRSVSDNDIRK
Sbjct: 697 LAIRESIESEIRRERERQTNPS--AMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
Query: 341 YEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQP--TFQEEGGDDDLY 192
YEMFAQTLQQSRGFG +FRFP+ G + E DDDLY
Sbjct: 755 YEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLY 805
>AF100752-1|AAD43016.1| 806|Homo sapiens transitional endoplasmic
reticulum ATPase protein.
Length = 806
Score = 119 bits (287), Expect = 5e-27
Identities = 66/112 (58%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
Frame = -1
Query: 521 LAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSVSDNDIRK 342
LAIR++IE+EI RER R M+++E+DPVPEI R HFEEAM+FARRSVSDNDIRK
Sbjct: 697 LAIRESIESEIRRERERQTNPS--AMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
Query: 341 YEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQP--TFQEEGGDDDLY 192
YEMFAQTLQQSRGFG +FRFP+ G + E DDDLY
Sbjct: 755 YEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLY 805
>AC004472-1|AAC07984.1| 806|Homo sapiens TERA_HUMAN protein.
Length = 806
Score = 119 bits (287), Expect = 5e-27
Identities = 66/112 (58%), Positives = 77/112 (68%), Gaps = 2/112 (1%)
Frame = -1
Query: 521 LAIRQAIEAEIHRERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSVSDNDIRK 342
LAIR++IE+EI RER R M+++E+DPVPEI R HFEEAM+FARRSVSDNDIRK
Sbjct: 697 LAIRESIESEIRRERERQTNPS--AMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRK 754
Query: 341 YEMFAQTLQQSRGFGTNFRFPTNXXXXXXXXXXXGDQP--TFQEEGGDDDLY 192
YEMFAQTLQQSRGFG +FRFP+ G + E DDDLY
Sbjct: 755 YEMFAQTLQQSRGFG-SFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLY 805
>BC111958-1|AAI11959.1| 710|Homo sapiens ral guanine nucleotide
dissociation stimulator-like 3 protein.
Length = 710
Score = 32.3 bits (70), Expect = 1.1
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 235 TSPRSRRR-GVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTWRLAPAGS 62
+SPR RRR +T +AKL + S + SV P P++P R APAGS
Sbjct: 511 SSPRIRRRISLTKRLSAKLAREKSSSPSGSPGDPSSPTSSVSPGSPPSSPRSRDAPAGS 569
>BC101756-1|AAI01757.1| 710|Homo sapiens ral guanine nucleotide
dissociation stimulator-like 3 protein.
Length = 710
Score = 32.3 bits (70), Expect = 1.1
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 235 TSPRSRRR-GVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTWRLAPAGS 62
+SPR RRR +T +AKL + S + SV P P++P R APAGS
Sbjct: 511 SSPRIRRRISLTKRLSAKLAREKSSSPSGSPGDPSSPTSSVSPGSPPSSPRSRDAPAGS 569
>BC034491-1|AAH34491.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 32.3 bits (70), Expect = 1.1
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 98 GATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRR-HPPPPGTWAGRPLKYPCPL*LPR 274
G R+ +Q G +W P V S + C G PPPPG W K+PCP+ + R
Sbjct: 61 GPPRKQPKQQHGPG---FWFQPPVCSN--WGCWGGPWRPPPPGFW-----KFPCPVQVFR 110
Query: 275 LLGI 286
+ G+
Sbjct: 111 VYGL 114
>BC027600-1|AAH27600.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 32.3 bits (70), Expect = 1.1
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 98 GATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRR-HPPPPGTWAGRPLKYPCPL*LPR 274
G R+ +Q G +W P V S + C G PPPPG W K+PCP+ + R
Sbjct: 61 GPPRKQPKQQHGPG---FWFQPPVCSN--WGCWGGPWRPPPPGFW-----KFPCPVQVFR 110
Query: 275 LLGI 286
+ G+
Sbjct: 111 VYGL 114
>BC026075-1|AAH26075.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 32.3 bits (70), Expect = 1.1
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 98 GATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRR-HPPPPGTWAGRPLKYPCPL*LPR 274
G R+ +Q G +W P V S + C G PPPPG W K+PCP+ + R
Sbjct: 61 GPPRKQPKQQHGPG---FWFQPPVCSN--WGCWGGPWRPPPPGFW-----KFPCPVQVFR 110
Query: 275 LLGI 286
+ G+
Sbjct: 111 VYGL 114
>BC024183-1|AAH24183.1| 406|Homo sapiens chromosome 12 open reading
frame 12 protein.
Length = 406
Score = 32.3 bits (70), Expect = 1.1
Identities = 22/64 (34%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Frame = +2
Query: 98 GATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRR-HPPPPGTWAGRPLKYPCPL*LPR 274
G R+ +Q G +W P V S + C G PPPPG W K+PCP+ + R
Sbjct: 61 GPPRKQPKQQHGPG---FWFQPPVCSN--WGCWGGPWRPPPPGFW-----KFPCPVQVFR 110
Query: 275 LLGI 286
+ G+
Sbjct: 111 VYGL 114
>AK074082-1|BAB84908.1| 497|Homo sapiens FLJ00153 protein protein.
Length = 497
Score = 32.3 bits (70), Expect = 1.1
Identities = 22/59 (37%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -2
Query: 235 TSPRSRRR-GVTTTCTAKLCLARDLGASPPSR*TRTNVLSVCPACRPTTPTWRLAPAGS 62
+SPR RRR +T +AKL + S + SV P P++P R APAGS
Sbjct: 308 SSPRIRRRISLTKRLSAKLAREKSSSPSGSPGDPSSPTSSVSPGSPPSSPRSRDAPAGS 366
>U78772-1|AAB70460.1| 750|Homo sapiens nuclear VCP-like protein
NVLp.1 protein.
Length = 750
Score = 31.5 bits (68), Expect = 1.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 416 EISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQ 312
++S HFEEA K R S+S D YE ++L +
Sbjct: 716 KVSHKHFEEAFKKVRSSISKKDQIMYERLQESLSR 750
>U68140-1|AAB70457.1| 856|Homo sapiens nuclear VCP-like protein
NVLp.2 protein.
Length = 856
Score = 31.5 bits (68), Expect = 1.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 416 EISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQ 312
++S HFEEA K R S+S D YE ++L +
Sbjct: 822 KVSHKHFEEAFKKVRSSISKKDQIMYERLQESLSR 856
>BC012105-1|AAH12105.1| 659|Homo sapiens NVL protein protein.
Length = 659
Score = 31.5 bits (68), Expect = 1.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -1
Query: 416 EISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQ 312
++S HFEEA K R S+S D YE ++L +
Sbjct: 625 KVSHKHFEEAFKKVRSSISKKDQIMYERLQESLSR 659
>BX000476-1|CAI41974.1| 384|Homo sapiens protein phosphatase 2
(formerly 2A), regulatory subunit B'', beta protein.
Length = 384
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 113 TNRQDVSSGLSRWWRCPEVASETQFSCTGRRHPPP 217
T R DV++G W R E S GR PPP
Sbjct: 63 TRRSDVNAGALVWERGRRARFEAALSSAGRTAPPP 97
>AL954664-1|CAI41961.1| 384|Homo sapiens protein phosphatase 2
(formerly 2A), regulatory subunit B'', beta protein.
Length = 384
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 113 TNRQDVSSGLSRWWRCPEVASETQFSCTGRRHPPP 217
T R DV++G W R E S GR PPP
Sbjct: 63 TRRSDVNAGALVWERGRRARFEAALSSAGRTAPPP 97
>AL732314-1|CAI41583.1| 384|Homo sapiens protein phosphatase 2
(formerly 2A), regulatory subunit B'', beta protein.
Length = 384
Score = 29.5 bits (63), Expect = 7.5
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = +2
Query: 113 TNRQDVSSGLSRWWRCPEVASETQFSCTGRRHPPP 217
T R DV++G W R E S GR PPP
Sbjct: 63 TRRSDVNAGALVWERGRRARFEAALSSAGRTAPPP 97
>BC063431-1|AAH63431.1| 301|Homo sapiens hepatitis A virus cellular
receptor 2 protein.
Length = 301
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 68 GRGQAPCW-CGGATRRTNRQDVSSGLSRWW 154
G+G P + CG RT+ +DV+ SR+W
Sbjct: 54 GKGACPVFECGNVVLRTDERDVNYWTSRYW 83
>BC020843-1|AAH20843.1| 142|Homo sapiens HAVCR2 protein protein.
Length = 142
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 68 GRGQAPCW-CGGATRRTNRQDVSSGLSRWW 154
G+G P + CG RT+ +DV+ SR+W
Sbjct: 54 GKGACPVFECGNVVLRTDERDVNYWTSRYW 83
>AY069944-1|AAL55401.1| 301|Homo sapiens putative kidney injury
molecule-3 protein.
Length = 301
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 68 GRGQAPCW-CGGATRRTNRQDVSSGLSRWW 154
G+G P + CG RT+ +DV+ SR+W
Sbjct: 54 GKGACPVFECGNVVLRTDERDVNYWTSRYW 83
>AK127525-1|BAC87019.1| 150|Homo sapiens protein ( Homo sapiens
cDNA FLJ45618 fis, clone BRTHA3027171. ).
Length = 150
Score = 29.1 bits (62), Expect = 9.9
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -2
Query: 121 SVCPACRPTTPTWR 80
+ CP C PT PTWR
Sbjct: 132 TACPVCCPTPPTWR 145
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 29.1 bits (62), Expect = 9.9
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 206 HPPPPGTWAGRPLKYPCP 259
HP PP T RPL PCP
Sbjct: 3 HPRPPSTPPPRPLSTPCP 20
>AK027334-1|BAB55044.1| 301|Homo sapiens protein ( Homo sapiens
cDNA FLJ14428 fis, clone HEMBA1006293. ).
Length = 301
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 68 GRGQAPCW-CGGATRRTNRQDVSSGLSRWW 154
G+G P + CG RT+ +DV+ SR+W
Sbjct: 54 GKGACPVFECGNVVLRTDERDVNYWTSRYW 83
>AF450243-1|AAL65158.1| 301|Homo sapiens T cell immunoglobulin
mucin-3 protein.
Length = 301
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 68 GRGQAPCW-CGGATRRTNRQDVSSGLSRWW 154
G+G P + CG RT+ +DV+ SR+W
Sbjct: 54 GKGACPVFECGNVVLRTDERDVNYWTSRYW 83
>AF450242-1|AAL65157.1| 301|Homo sapiens T cell immunoglobulin
mucin-3 protein.
Length = 301
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 68 GRGQAPCW-CGGATRRTNRQDVSSGLSRWW 154
G+G P + CG RT+ +DV+ SR+W
Sbjct: 54 GKGACPVFECGNVVLRTDERDVNYWTSRYW 83
>AF251707-1|AAM19100.1| 301|Homo sapiens hepatitis A virus cellular
receptor 2 protein.
Length = 301
Score = 29.1 bits (62), Expect = 9.9
Identities = 12/30 (40%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Frame = +2
Query: 68 GRGQAPCW-CGGATRRTNRQDVSSGLSRWW 154
G+G P + CG RT+ +DV+ SR+W
Sbjct: 54 GKGACPVFECGNVVLRTDERDVNYWTSRYW 83
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,058,097
Number of Sequences: 237096
Number of extensions: 1847334
Number of successful extensions: 6176
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 5765
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6160
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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