Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS329A04f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical pr...   118   3e-27
Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical p...   118   3e-27
Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical pr...   117   4e-27
U58750-2|AAB00642.1|  615|Caenorhabditis elegans Polo kinase pro...    29   2.7  
AL117203-4|CAB55106.2|  813|Caenorhabditis elegans Hypothetical ...    29   2.7  
AF059715-1|AAF05624.1|  813|Caenorhabditis elegans cell survival...    29   2.7  
AF059024-1|AAC14425.1|  615|Caenorhabditis elegans polo-like kin...    29   2.7  
Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical p...    27   6.2  
Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical pr...    27   6.2  
AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical ...    27   6.2  
Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U41031-3|AAA82620.1|  164|Caenorhabditis elegans Hypothetical pr...    27   8.1  
U00063-2|AAK18961.1|  329|Caenorhabditis elegans Hypothetical pr...    27   8.1  

>Z48334-9|CAA88314.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score =  118 bits (283), Expect = 3e-27
 Identities = 58/83 (69%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -1

Query: 521 LAIRQAIEAEIHRERSRXXXXXXAVMDMDEE--DPVPEISRAHFEEAMKFARRSVSDNDI 348
           LAIR++IE EI +E+ R          M++E  DPVPEI+RAHFEEAMKFARRSV+DNDI
Sbjct: 702 LAIRESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFARRSVTDNDI 761

Query: 347 RKYEMFAQTLQQSRGFGTNFRFP 279
           RKYEMFAQTLQQSRGFG NF+FP
Sbjct: 762 RKYEMFAQTLQQSRGFGNNFKFP 784


>Z48045-12|CAA88105.1|  810|Caenorhabditis elegans Hypothetical
           protein C41C4.8 protein.
          Length = 810

 Score =  118 bits (283), Expect = 3e-27
 Identities = 58/83 (69%), Positives = 67/83 (80%), Gaps = 2/83 (2%)
 Frame = -1

Query: 521 LAIRQAIEAEIHRERSRXXXXXXAVMDMDEE--DPVPEISRAHFEEAMKFARRSVSDNDI 348
           LAIR++IE EI +E+ R          M++E  DPVPEI+RAHFEEAMKFARRSV+DNDI
Sbjct: 702 LAIRESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHFEEAMKFARRSVTDNDI 761

Query: 347 RKYEMFAQTLQQSRGFGTNFRFP 279
           RKYEMFAQTLQQSRGFG NF+FP
Sbjct: 762 RKYEMFAQTLQQSRGFGNNFKFP 784


>Z49886-1|CAA90050.1|  809|Caenorhabditis elegans Hypothetical
           protein C06A1.1 protein.
          Length = 809

 Score =  117 bits (282), Expect = 4e-27
 Identities = 58/83 (69%), Positives = 66/83 (79%), Gaps = 2/83 (2%)
 Frame = -1

Query: 521 LAIRQAIEAEIH--RERSRXXXXXXAVMDMDEEDPVPEISRAHFEEAMKFARRSVSDNDI 348
           LAIR++IE EI   +ER         +M+ D  DPVPEI+RAHFEEAMKFARRSV+DNDI
Sbjct: 704 LAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEITRAHFEEAMKFARRSVTDNDI 763

Query: 347 RKYEMFAQTLQQSRGFGTNFRFP 279
           RKYEMFAQTLQQSRGFG NF+FP
Sbjct: 764 RKYEMFAQTLQQSRGFGNNFKFP 786


>U58750-2|AAB00642.1|  615|Caenorhabditis elegans Polo kinase
           protein 3 protein.
          Length = 615

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -3

Query: 369 LRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKRGSYRGHGYFS 241
           LR R    Q ++ +  P   P + + +Q+P ++G++ G G F+
Sbjct: 5   LRTRGNSAQDKNKKHVPNVPPIIYDDMQVPYEKGAFLGEGGFA 47


>AL117203-4|CAB55106.2|  813|Caenorhabditis elegans Hypothetical
           protein Y48C3A.7 protein.
          Length = 813

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 440 MDEEDPVPEISRAHFEEAMKFARRSVSDNDIRKYE 336
           ++ ++ V  +   HF EA    R SV++ D +KYE
Sbjct: 763 LENDESVKGVGMRHFREAASRIRPSVTEADRKKYE 797


>AF059715-1|AAF05624.1|  813|Caenorhabditis elegans cell survival
           CED-4-interactingprotein MAC-1 protein.
          Length = 813

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/35 (34%), Positives = 20/35 (57%)
 Frame = -1

Query: 440 MDEEDPVPEISRAHFEEAMKFARRSVSDNDIRKYE 336
           ++ ++ V  +   HF EA    R SV++ D +KYE
Sbjct: 763 LENDESVKGVGMRHFREAASRIRPSVTEADRKKYE 797


>AF059024-1|AAC14425.1|  615|Caenorhabditis elegans polo-like kinase
           protein.
          Length = 615

 Score = 28.7 bits (61), Expect = 2.7
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -3

Query: 369 LRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKRGSYRGHGYFS 241
           LR R    Q ++ +  P   P + + +Q+P ++G++ G G F+
Sbjct: 5   LRTRGNSAQDKNKKHVPNVPPIIYDDMQVPYEKGAFLGEGGFA 47


>Z81479-11|CAB03937.2| 1441|Caenorhabditis elegans Hypothetical
           protein C34F6.10 protein.
          Length = 1441

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 164 EVASETQFSCTGRRHPPPPGTWAGRPLKYPCPL 262
           E+ S    S TG   P  P TW  +P  +P P+
Sbjct: 88  EMTSTEGTSSTGTGSPQEPKTWISQPGYHPVPI 120


>Z73423-8|CAO82012.1| 1441|Caenorhabditis elegans Hypothetical
           protein C34F6.10 protein.
          Length = 1441

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 12/33 (36%), Positives = 16/33 (48%)
 Frame = +2

Query: 164 EVASETQFSCTGRRHPPPPGTWAGRPLKYPCPL 262
           E+ S    S TG   P  P TW  +P  +P P+
Sbjct: 88  EMTSTEGTSSTGTGSPQEPKTWISQPGYHPVPI 120


>AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical
           protein C17A2.5 protein.
          Length = 731

 Score = 27.5 bits (58), Expect = 6.2
 Identities = 8/17 (47%), Positives = 14/17 (82%)
 Frame = -1

Query: 98  HHTNMAPGPGRFTYAIV 48
           +HT++ PGPG+F  A++
Sbjct: 491 NHTSLEPGPGKFKLAVI 507


>Z68753-3|CAA92988.3|  984|Caenorhabditis elegans Hypothetical
           protein ZC518.2 protein.
          Length = 984

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = +2

Query: 161 PEVASETQFSCTGRRHPPPPGTWAGRPLKYPCP 259
           P  +  TQ S  G   PPPP     RP  +P P
Sbjct: 107 PSFSPATQPSMNGHHAPPPPA--VSRPPAFPTP 137


>U41031-3|AAA82620.1|  164|Caenorhabditis elegans Hypothetical
           protein C16B8.3 protein.
          Length = 164

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +2

Query: 194 TGRRHPPPPGTWAGRPLKY 250
           TG+  PPPPG + G P  Y
Sbjct: 146 TGQYPPPPPGQYPGYPRPY 164


>U00063-2|AAK18961.1|  329|Caenorhabditis elegans Hypothetical
           protein F56C9.6 protein.
          Length = 329

 Score = 27.1 bits (57), Expect = 8.1
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -3

Query: 381 VRAPLRVRQRHPQVRDVRADPAAEPRLRN 295
           V +P+R+ QR+P+  D    P++EP+  N
Sbjct: 266 VPSPIRIGQRYPKRPDNMPKPSSEPKHLN 294


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,202,600
Number of Sequences: 27780
Number of extensions: 251459
Number of successful extensions: 838
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 794
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 836
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)