Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328H08f
(475 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 256 9e-71
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 252 1e-69
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 140 7e-36
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 107 6e-26
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 33 0.002
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 24 0.72
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 1.7
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.2
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 6.7
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 6.7
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 6.7
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 256 bits (627), Expect = 9e-71
Identities = 120/123 (97%), Positives = 120/123 (97%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFXYAWVL 286
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSF YAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 287 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCXVLIVAAGT 466
DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADC VLIVAAGT
Sbjct: 61 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGT 120
Query: 467 GEF 475
GEF
Sbjct: 121 GEF 123
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 252 bits (618), Expect = 1e-69
Identities = 118/123 (95%), Positives = 119/123 (96%)
Frame = +2
Query: 107 MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFXYAWVL 286
MGKEK HINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSF YAWVL
Sbjct: 1 MGKEKIHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVL 60
Query: 287 DKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCXVLIVAAGT 466
DKLKAERERGITIDIALWKFET+KYYVTIIDAPGHRDFIKNMITGTSQADC VLIVAAG
Sbjct: 61 DKLKAERERGITIDIALWKFETAKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGI 120
Query: 467 GEF 475
GEF
Sbjct: 121 GEF 123
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 140 bits (339), Expect = 7e-36
Identities = 65/66 (98%), Positives = 65/66 (98%)
Frame = +2
Query: 278 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCXVLIVA 457
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADC VLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 458 AGTGEF 475
AGTGEF
Sbjct: 61 AGTGEF 66
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 107 bits (257), Expect = 6e-26
Identities = 49/50 (98%), Positives = 49/50 (98%)
Frame = +2
Query: 326 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCXVLIVAAGTGEF 475
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADC VLIVAAGTGEF
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEF 50
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 32.7 bits (71), Expect = 0.002
Identities = 16/35 (45%), Positives = 18/35 (51%)
Frame = +2
Query: 365 VTIIDAPGHRDFIKNMITGTSQADCXVLIVAAGTG 469
VT +D PGH FI G D VL+VAA G
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDG 229
Score = 25.4 bits (53), Expect = 0.31
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 119 KTHINIVVIGHVDSGKST 172
K H + ++GHVD GK+T
Sbjct: 143 KRHPIVTIMGHVDHGKTT 160
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 24.2 bits (50), Expect = 0.72
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +2
Query: 128 INIVVIGHVDSGKST 172
INI IGHV GKST
Sbjct: 43 INIGTIGHVAHGKST 57
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 1.7
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +2
Query: 350 TSKYYVTIIDAPGHRDFIKNMITGTSQADCXVLI 451
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 2.2
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +2
Query: 350 TSKYYVTIIDAPGHRDFIKNMITGTSQADCXVLI 451
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 209 DKRTIEKFEKEAQEMG 256
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 209 DKRTIEKFEKEAQEMG 256
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 6.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 209 DKRTIEKFEKEAQEMG 256
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,021
Number of Sequences: 438
Number of extensions: 2294
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12805416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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