BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328H02f
(452 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC150334-1|AAI50335.1| 1498|Homo sapiens SIPA1L2 protein protein. 29 9.8
AY168879-1|AAO12530.1| 1722|Homo sapiens SPA-1-like 2 protein. 29 9.8
AL356965-2|CAH73409.1| 1722|Homo sapiens signal-induced prolifer... 29 9.8
AL157409-2|CAI22920.1| 1722|Homo sapiens signal-induced prolifer... 29 9.8
AB037810-1|BAA92627.1| 1514|Homo sapiens KIAA1389 protein protein. 29 9.8
>BC150334-1|AAI50335.1| 1498|Homo sapiens SIPA1L2 protein protein.
Length = 1498
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 260 IAPWCCQRCLPPYTTRSRLF 319
I PW CQRC Y +S LF
Sbjct: 96 IRPWNCQRCFAHYDVQSILF 115
>AY168879-1|AAO12530.1| 1722|Homo sapiens SPA-1-like 2 protein.
Length = 1722
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 260 IAPWCCQRCLPPYTTRSRLF 319
I PW CQRC Y +S LF
Sbjct: 320 IRPWNCQRCFAHYDVQSILF 339
>AL356965-2|CAH73409.1| 1722|Homo sapiens signal-induced
proliferation-associated 1 like 2 protein.
Length = 1722
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 260 IAPWCCQRCLPPYTTRSRLF 319
I PW CQRC Y +S LF
Sbjct: 320 IRPWNCQRCFAHYDVQSILF 339
>AL157409-2|CAI22920.1| 1722|Homo sapiens signal-induced
proliferation-associated 1 like 2 protein.
Length = 1722
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 260 IAPWCCQRCLPPYTTRSRLF 319
I PW CQRC Y +S LF
Sbjct: 320 IRPWNCQRCFAHYDVQSILF 339
>AB037810-1|BAA92627.1| 1514|Homo sapiens KIAA1389 protein protein.
Length = 1514
Score = 28.7 bits (61), Expect = 9.8
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +2
Query: 260 IAPWCCQRCLPPYTTRSRLF 319
I PW CQRC Y +S LF
Sbjct: 112 IRPWNCQRCFAHYDVQSILF 131
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 62,102,835
Number of Sequences: 237096
Number of extensions: 1070177
Number of successful extensions: 2480
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2433
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2480
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3758237868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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