Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328G08f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1252 - 35748000-35748173,35748243-35748375,35749771-357498... 129 2e-30
05_05_0135 - 22626163-22626198,22626391-22626441,22626516-226266... 124 4e-29
07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343 123 1e-28
05_07_0196 + 28352320-28352522,28352679-28352808,28353774-283538... 121 4e-28
03_04_0055 + 16891212-16891848,16893166-16893206 120 9e-28
08_01_0498 - 4327502-4328395 118 2e-27
01_07_0092 - 41021743-41022276 105 3e-23
02_05_0591 - 30183105-30183869 99 1e-21
06_01_1181 + 10148653-10149405 97 6e-21
01_07_0091 - 41013837-41014271 92 2e-19
02_05_0592 - 30210219-30210757,30210898-30210919 55 3e-08
08_02_0516 + 18080706-18080760,18081796-18081885,18082479-180825... 55 4e-08
09_06_0334 - 22389087-22389223,22389578-22389696,22390192-22390439 42 4e-04
04_03_0923 + 20843477-20845044,20846081-20846996 29 1.7
03_06_0145 - 31973924-31975837 29 3.0
02_05_1152 + 34494423-34494586,34494725-34494781,34494851-344949... 29 3.0
05_01_0213 - 1606383-1606816,1607695-1608355 27 6.9
04_04_0576 + 26346611-26346637,26346758-26346883,26347161-263472... 27 9.1
04_03_0550 + 17054155-17054182,17054438-17054503,17054504-17056959 27 9.1
03_01_0250 - 1937650-1939071,1939375-1939468,1939665-1939870,193... 27 9.1
>01_06_1252 -
35748000-35748173,35748243-35748375,35749771-35749847,
35750465-35750509,35750584-35750679,35751125-35751130,
35751259-35751388,35751510-35751706
Length = 285
Score = 129 bits (311), Expect = 2e-30
Identities = 60/90 (66%), Positives = 76/90 (84%), Gaps = 1/90 (1%)
Frame = +2
Query: 254 LEDENNSDSGSKSNAP-LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFI 430
+ D + +SGS + +REQDRFLPIANI++IMK+A+P NGKIAKDA+E +QEC+SEFI
Sbjct: 1 MADAGHDESGSPPRSGGVREQDRFLPIANISRIMKKAVPANGKIAKDAKETLQECVSEFI 60
Query: 431 SFVTSEASDRCKVEKRKTINGXDVLFALNT 520
SFVTSEASD+C+ EKRKTING D+LFA+ T
Sbjct: 61 SFVTSEASDKCQKEKRKTINGEDLLFAMGT 90
>05_05_0135 -
22626163-22626198,22626391-22626441,22626516-22626608,
22627249-22627254,22628051-22628180,22628333-22628583
Length = 188
Score = 124 bits (299), Expect = 4e-29
Identities = 57/80 (71%), Positives = 69/80 (86%)
Frame = +2
Query: 281 GSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDR 460
G +REQDRFLPIANI++IMK+AIP NGKIAKDA+E VQEC+SEFISF+TSEASD+
Sbjct: 29 GGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKDAKETVQECVSEFISFITSEASDK 88
Query: 461 CKVEKRKTINGXDVLFALNT 520
C+ EKRKTING D+L+A+ T
Sbjct: 89 CQREKRKTINGDDLLWAMAT 108
>07_03_1205 - 24865991-24866077,24866255-24866259,24867746-24868343
Length = 229
Score = 123 bits (296), Expect = 1e-28
Identities = 57/90 (63%), Positives = 75/90 (83%), Gaps = 4/90 (4%)
Frame = +2
Query: 263 ENNSDSGSKSNA----PLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFI 430
+++++SG SNA REQDRFLPIAN+++IMKRA+P N KI+KDA+E VQEC+SEFI
Sbjct: 3 DSDNESGGPSNAGEYASAREQDRFLPIANVSRIMKRALPANAKISKDAKETVQECVSEFI 62
Query: 431 SFVTSEASDRCKVEKRKTINGXDVLFALNT 520
SF+T EASD+C+ EKRKTING D+L+A+ T
Sbjct: 63 SFITGEASDKCQREKRKTINGDDLLWAMTT 92
>05_07_0196 +
28352320-28352522,28352679-28352808,28353774-28353851,
28355562-28355664,28356109-28356302,28356501-28356518
Length = 241
Score = 121 bits (291), Expect = 4e-28
Identities = 54/87 (62%), Positives = 69/87 (79%)
Frame = +2
Query: 260 DENNSDSGSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFV 439
D + G +EQDRFLPIANI +IM+RA+PENGKIAKD++E VQEC+SEFISF+
Sbjct: 6 DGTENGGGGGGGGVGKEQDRFLPIANIGRIMRRAVPENGKIAKDSKESVQECVSEFISFI 65
Query: 440 TSEASDRCKVEKRKTINGXDVLFALNT 520
TSEASD+C EKRKTING D+++++ T
Sbjct: 66 TSEASDKCLKEKRKTINGDDLIWSMGT 92
>03_04_0055 + 16891212-16891848,16893166-16893206
Length = 225
Score = 120 bits (288), Expect = 9e-28
Identities = 56/92 (60%), Positives = 75/92 (81%), Gaps = 6/92 (6%)
Frame = +2
Query: 263 ENNSDSGSKSN------APLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISE 424
++++DSG SN + REQDRFLPIAN+++IMK+A+P N KI+KDA+E VQEC+SE
Sbjct: 3 DSDNDSGGPSNYAGGELSSPREQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSE 62
Query: 425 FISFVTSEASDRCKVEKRKTINGXDVLFALNT 520
FISF+T EASD+C+ EKRKTING D+L+A+ T
Sbjct: 63 FISFITGEASDKCQREKRKTINGDDLLWAMTT 94
>08_01_0498 - 4327502-4328395
Length = 297
Score = 118 bits (285), Expect = 2e-27
Identities = 51/80 (63%), Positives = 69/80 (86%)
Frame = +2
Query: 281 GSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDR 460
G ++P +EQDRFLPIAN+++IMKR++P N KI+K+++E VQEC+SEFISFVT EASD+
Sbjct: 49 GGGGDSPAKEQDRFLPIANVSRIMKRSLPANAKISKESKETVQECVSEFISFVTGEASDK 108
Query: 461 CKVEKRKTINGXDVLFALNT 520
C+ EKRKTING D+L+A+ T
Sbjct: 109 CQREKRKTINGDDLLWAMTT 128
>01_07_0092 - 41021743-41022276
Length = 177
Score = 105 bits (251), Expect = 3e-23
Identities = 45/70 (64%), Positives = 59/70 (84%)
Frame = +2
Query: 302 LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRK 481
++EQDR LPIAN+ +IMK+ +P N KI+K+A+E +QEC+SEFISFVT EASD+C EKRK
Sbjct: 32 IKEQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRK 91
Query: 482 TINGXDVLFA 511
T+NG DV +A
Sbjct: 92 TVNGDDVCWA 101
>02_05_0591 - 30183105-30183869
Length = 254
Score = 99 bits (238), Expect = 1e-21
Identities = 43/86 (50%), Positives = 66/86 (76%), Gaps = 1/86 (1%)
Frame = +2
Query: 263 ENNSDSGSKSNAP-LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFV 439
+ N + + AP +REQDR +PIAN+ +IM+R +P + KI+ DA+E +QEC+SE+ISF+
Sbjct: 16 DGNGGAQQAAAAPAIREQDRLMPIANVIRIMRRVLPAHAKISDDAKETIQECVSEYISFI 75
Query: 440 TSEASDRCKVEKRKTINGXDVLFALN 517
T EA++RC+ E+RKTI DVL+A++
Sbjct: 76 TGEANERCQREQRKTITAEDVLWAMS 101
>06_01_1181 + 10148653-10149405
Length = 250
Score = 97.5 bits (232), Expect = 6e-21
Identities = 41/74 (55%), Positives = 59/74 (79%)
Frame = +2
Query: 296 APLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEK 475
A +REQDR +PIAN+ +IM+R +P + KI+ DA+E +QEC+SEFISFVT EA+DRC E
Sbjct: 27 AVVREQDRLMPIANVIRIMRRVLPPHAKISDDAKEVIQECVSEFISFVTGEANDRCHREH 86
Query: 476 RKTINGXDVLFALN 517
RKT+ D+++A++
Sbjct: 87 RKTVTAEDLVWAMD 100
>01_07_0091 - 41013837-41014271
Length = 144
Score = 92.3 bits (219), Expect = 2e-19
Identities = 40/70 (57%), Positives = 53/70 (75%)
Frame = +2
Query: 311 QDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTIN 490
QD LPIAN+ +IMK +P KI+K A+E +QEC +EFISFVT EAS+RC+ E+RKT+N
Sbjct: 5 QDNLLPIANVGRIMKDGLPPQAKISKRAKETIQECATEFISFVTGEASERCRRERRKTVN 64
Query: 491 GXDVLFALNT 520
G DV A+ +
Sbjct: 65 GDDVCHAMRS 74
>02_05_0592 - 30210219-30210757,30210898-30210919
Length = 186
Score = 55.2 bits (127), Expect = 3e-08
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Frame = +2
Query: 239 NSDDVLEDENNSDS--GSKSNAPLREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQE 412
N D V + SD GS +NA L P+AN+ +++K+ +P KI A+ +
Sbjct: 11 NMDQVKKAAVRSDGVGGSATNAEL-------PMANLVRLIKKVLPGKAKIGGAAKGLTHD 63
Query: 413 CISEFISFVTSEASDRCKVEKRKTINGXDVL 505
C EF+ FV EAS++ K E R+T+ D L
Sbjct: 64 CAVEFVGFVGDEASEKAKAEHRRTVAPEDYL 94
>08_02_0516 +
18080706-18080760,18081796-18081885,18082479-18082573,
18083658-18083726,18083812-18084393
Length = 296
Score = 54.8 bits (126), Expect = 4e-08
Identities = 26/69 (37%), Positives = 46/69 (66%)
Frame = +2
Query: 308 EQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTI 487
++D LP + + KI+K +P + ++A+DA++ + EC EFI+ ++SE+++ C E +KTI
Sbjct: 11 KEDVSLPKSTMFKIIKEMLPPDVRVARDAQDLLVECCVEFINLLSSESNEVCSREDKKTI 70
Query: 488 NGXDVLFAL 514
VL AL
Sbjct: 71 APEHVLRAL 79
>09_06_0334 - 22389087-22389223,22389578-22389696,22390192-22390439
Length = 167
Score = 41.5 bits (93), Expect = 4e-04
Identities = 20/46 (43%), Positives = 28/46 (60%)
Frame = +2
Query: 380 IAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGXDVLFALN 517
+ KDA E FI ++++ A+D CK KR+TIN DVL AL+
Sbjct: 61 VNKDAMSAFAESARIFIHYLSATANDMCKESKRQTINADDVLKALD 106
>04_03_0923 + 20843477-20845044,20846081-20846996
Length = 827
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/52 (34%), Positives = 25/52 (48%)
Frame = +2
Query: 314 DRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKV 469
D+F P+ +I ++ A EN K+A A EC Q C+S S C V
Sbjct: 356 DKFYPVQSI-RLPHSA--ENVKVATSADECSQACLSNCSCTAYSYGKSGCSV 404
>03_06_0145 - 31973924-31975837
Length = 637
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +2
Query: 185 DLVRLDNGFLVADDTFVVNSDDVLEDENNSDSGSKS 292
D+ +D+G DD VV DV E + D GS S
Sbjct: 262 DMAHVDDGGAATDDNSVVEVTDVAEHTADVDDGSAS 297
>02_05_1152 +
34494423-34494586,34494725-34494781,34494851-34494908,
34494989-34495088,34495270-34495383,34495588-34495810,
34496112-34496246,34496575-34496679,34496906-34497001,
34497387-34497516,34497933-34497983,34498538-34498648,
34499267-34499376,34499490-34499655,34499740-34499820,
34499907-34499975,34500099-34500212,34500699-34500760,
34500894-34500990,34501152-34501271
Length = 720
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 319 IFTNREYS*NNETGNTREWKDSKRCKGMCSGMYIRIHIVCN 441
I+ + YS N+ G + K KRC G+ SG + + +CN
Sbjct: 506 IYLPQRYSPNDIEGKSFCRKTLKRCVGLHSGSSVVVGCICN 546
>05_01_0213 - 1606383-1606816,1607695-1608355
Length = 364
Score = 27.5 bits (58), Expect = 6.9
Identities = 15/78 (19%), Positives = 39/78 (50%), Gaps = 5/78 (6%)
Frame = +2
Query: 272 SDSGSKSNAPLREQDRFLP-IANIAKIMKRAIPENGK----IAKDARECVQECISEFISF 436
S+SG ++ + + + + F+P ++ + + R + E+ + D+ + +SE +
Sbjct: 261 SESGMRNRSVMNKSEVFIPGVSGTLQFICRLVEEDLNSVIWLTSDSENIAADMVSEILDQ 320
Query: 437 VTSEASDRCKVEKRKTIN 490
+TSE +D +T++
Sbjct: 321 LTSETADELMQTGSETVH 338
>04_04_0576 +
26346611-26346637,26346758-26346883,26347161-26347295,
26348162-26348332
Length = 152
Score = 27.1 bits (57), Expect = 9.1
Identities = 17/58 (29%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Frame = +2
Query: 146 LKFLIMDSDELGNDLVRLDNGFLVADDTFVVN----SDDVLEDENNSDSGSKSNAPLR 307
LK + + G+D V+ F+ D +N S ++LE+E N + KSN +R
Sbjct: 86 LKLFVDLIEHKGSDCVK---PFIALQDCIKINPEAFSKEILEEEENDEEAEKSNLKVR 140
>04_03_0550 + 17054155-17054182,17054438-17054503,17054504-17056959
Length = 849
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 3/46 (6%)
Frame = +2
Query: 362 IPENGKIAKDAR---ECVQECISEFISFVTSEASDRCKVEKRKTIN 490
+P + +I +DA EC Q C+S+ S + RC V K +N
Sbjct: 414 LPYDPQIMQDATTQGECAQACLSDCSCTAYSYQNSRCSVWHGKLLN 459
>03_01_0250 -
1937650-1939071,1939375-1939468,1939665-1939870,
1939986-1940132
Length = 622
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/44 (34%), Positives = 22/44 (50%)
Frame = +2
Query: 314 DRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTS 445
D LP A +A I+ R + A A C++ C S +SF+ S
Sbjct: 2 DSALPSAVLATILSRLDVRSLVAASAACRCLRSCASHALSFLPS 45
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,543,466
Number of Sequences: 37544
Number of extensions: 214178
Number of successful extensions: 495
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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