Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328G08f
         (521 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF025470-4|AAB71054.1|  403|Caenorhabditis elegans Hypothetical ...    93   1e-19
Z81546-4|CAB04453.1|  184|Caenorhabditis elegans Hypothetical pr...    40   0.001
U00043-7|AAC77511.1|  137|Caenorhabditis elegans Hypothetical pr...    36   0.023
AL132949-3|CAB61070.1|  179|Caenorhabditis elegans Hypothetical ...    31   0.50 
AC024859-9|ABQ13045.1|  296|Caenorhabditis elegans Hypothetical ...    30   0.87 
AC024859-8|ABQ13046.1|  337|Caenorhabditis elegans Hypothetical ...    30   0.87 

>AF025470-4|AAB71054.1|  403|Caenorhabditis elegans Hypothetical
           protein W10D9.4 protein.
          Length = 403

 Score = 93.1 bits (221), Expect = 1e-19
 Identities = 40/71 (56%), Positives = 54/71 (76%)
 Frame = +2

Query: 302 LREQDRFLPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRK 481
           L +Q+RFLPIAN+ +IMK  +    K+AKDA+EC QEC+SEFISF+ SEA++ C + KRK
Sbjct: 59  LLDQERFLPIANVVRIMKTQMDPQAKLAKDAKECAQECVSEFISFIASEAAEICNITKRK 118

Query: 482 TINGXDVLFAL 514
           TI   D+L A+
Sbjct: 119 TITADDLLTAM 129


>Z81546-4|CAB04453.1|  184|Caenorhabditis elegans Hypothetical
           protein F53A2.5 protein.
          Length = 184

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 22/64 (34%), Positives = 34/64 (53%)
 Frame = +2

Query: 323 LPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGXDV 502
           LP   I +I+K  +PE  +IA ++R+ +  C  EF+  +  EA      ++RKTI    V
Sbjct: 22  LPQKGINQIIKEVVPEM-RIANESRDMINACCVEFVKHIAREAQRIASQDQRKTIYHEHV 80

Query: 503 LFAL 514
             AL
Sbjct: 81  QKAL 84


>U00043-7|AAC77511.1|  137|Caenorhabditis elegans Hypothetical
           protein T26A5.8 protein.
          Length = 137

 Score = 35.5 bits (78), Expect = 0.023
 Identities = 18/64 (28%), Positives = 36/64 (56%)
 Frame = +2

Query: 323 LPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGXDV 502
           +P A + ++MK    +N   +KDAR+ +    + F+  ++  ++   + +K KTI+G DV
Sbjct: 18  MPAAIVTRLMKE---DNISASKDARDVIARAAAVFLINLSDVSAQSARDQKHKTISGDDV 74

Query: 503 LFAL 514
           +  L
Sbjct: 75  VKGL 78


>AL132949-3|CAB61070.1|  179|Caenorhabditis elegans Hypothetical
           protein Y53F4B.3 protein.
          Length = 179

 Score = 31.1 bits (67), Expect = 0.50
 Identities = 15/60 (25%), Positives = 32/60 (53%)
 Frame = +2

Query: 323 LPIANIAKIMKRAIPENGKIAKDARECVQECISEFISFVTSEASDRCKVEKRKTINGXDV 502
           LP+  + K++ R  P+   +  +A + + +    FI  +++ A+    +EKRKT+   D+
Sbjct: 36  LPLGRVKKVV-RMNPDVEMLNNEALQLMAKAAELFIKELSNAANQNAALEKRKTVQTKDI 94


>AC024859-9|ABQ13045.1|  296|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.14a protein.
          Length = 296

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 197 LDNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPI 331
           L  GF VAD+ FV+N+ D +E ++ S    K+     +   FL +
Sbjct: 132 LSVGFAVADERFVINALDFMEKKDPSTHAKKATVLFGDTLEFLEL 176


>AC024859-8|ABQ13046.1|  337|Caenorhabditis elegans Hypothetical
           protein Y71H2AM.14b protein.
          Length = 337

 Score = 30.3 bits (65), Expect = 0.87
 Identities = 15/45 (33%), Positives = 24/45 (53%)
 Frame = +2

Query: 197 LDNGFLVADDTFVVNSDDVLEDENNSDSGSKSNAPLREQDRFLPI 331
           L  GF VAD+ FV+N+ D +E ++ S    K+     +   FL +
Sbjct: 173 LSVGFAVADERFVINALDFMEKKDPSTHAKKATVLFGDTLEFLEL 217


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,645,475
Number of Sequences: 27780
Number of extensions: 208801
Number of successful extensions: 578
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 557
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 578
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)