Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328G07f
         (521 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL353779-1|CAI20975.1|  250|Homo sapiens chromosome 1 open readi...    30   4.3  
AF005081-1|AAB83961.1|  112|Homo sapiens skin-specific protein p...    30   4.3  
AK091550-1|BAC03691.1|  498|Homo sapiens protein ( Homo sapiens ...    29   9.9  

>AL353779-1|CAI20975.1|  250|Homo sapiens chromosome 1 open reading
           frame 68 protein.
          Length = 250

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
 Frame = -3

Query: 519 QRRGNCH---KGCWRNARGSGCGAGAAWSTSAGCTEAECSSL 403
           QR  NC+    GC  N+  SGC        S GC  + C  L
Sbjct: 188 QRPQNCNTGSSGCCENSGSSGCCGSGGCGCSCGCGSSGCCCL 229


>AF005081-1|AAB83961.1|  112|Homo sapiens skin-specific protein
           protein.
          Length = 112

 Score = 30.3 bits (65), Expect = 4.3
 Identities = 15/42 (35%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
 Frame = -3

Query: 519 QRRGNCH---KGCWRNARGSGCGAGAAWSTSAGCTEAECSSL 403
           QR  NC+    GC  N+  SGC        S GC  + C  L
Sbjct: 58  QRPQNCNTGSSGCCENSGSSGCCGSGGCGCSCGCGSSGCCCL 99


>AK091550-1|BAC03691.1|  498|Homo sapiens protein ( Homo sapiens
           cDNA FLJ34231 fis, clone FCBBF3025905, highly similar to
           Mus musculus (clone pMLZ-1) zinc finger protein (Zfp)
           mRNA. ).
          Length = 498

 Score = 29.1 bits (62), Expect = 9.9
 Identities = 17/63 (26%), Positives = 25/63 (39%)
 Frame = +1

Query: 70  DKILVTYRAAERSRNAVFPRVPTNSDMCNKPITTNNCDN*FNLVHSNI*PRYGCE*IELC 249
           +K  +TYR     +       P   D+C K     +  +    VH+   P Y C+  E  
Sbjct: 193 EKAFITYRTLTNHKKVHLGEKPYKCDVCEKSFNYTSLLSQHRRVHTREKP-YECDRCEKV 251

Query: 250 FRN 258
           FRN
Sbjct: 252 FRN 254


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,389,797
Number of Sequences: 237096
Number of extensions: 1356997
Number of successful extensions: 2678
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 2531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2678
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)