Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328G04f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 64 4e-10
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 63 5e-10
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 63 5e-10
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 63 5e-10
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 63 5e-10
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 63 5e-10
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 63 5e-10
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 63 5e-10
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 63 5e-10
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 63 5e-10
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 63 5e-10
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 54 3e-07
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 53 5e-07
AB066840-1|BAC01879.1| 121|Homo sapiens immunoglobulin heavy ch... 31 2.4
AJ579283-1|CAE45537.1| 121|Homo sapiens immunoglobulin heavy ch... 30 4.3
AF460746-1|AAM88117.1| 63|Homo sapiens immunoglobulin heavy ch... 29 7.5
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 63.7 bits (148), Expect = 4e-10
Identities = 37/94 (39%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Frame = +3
Query: 90 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 257
RN L GV R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGVGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 258 TVPLKRRKSFYPTQEKIR--ASSGGRPXSKHVRR 353
V L++ +YPT++ R S G +P S+HVR+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
Score = 50.4 bits (115), Expect = 4e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +1
Query: 355 IRPNLKIXTVXILLAGRHAGKRVVLVGILPSGLLLVTGPFCIQFVP 492
+R ++ T+ I+L GRH GKRVV + L SGLLLVTGP + VP
Sbjct: 140 LRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVP 185
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 63.3 bits (147), Expect = 5e-10
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Frame = +3
Query: 90 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 257
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 258 TVPLKRRKSFYPTQEKIR--ASSGGRPXSKHVRR 353
V L++ +YPT++ R S G +P S+HVR+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
Score = 50.4 bits (115), Expect = 4e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +1
Query: 355 IRPNLKIXTVXILLAGRHAGKRVVLVGILPSGLLLVTGPFCIQFVP 492
+R ++ T+ I+L GRH GKRVV + L SGLLLVTGP + VP
Sbjct: 140 LRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVP 185
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 63.3 bits (147), Expect = 5e-10
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Frame = +3
Query: 90 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 257
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 258 TVPLKRRKSFYPTQEKIR--ASSGGRPXSKHVRR 353
V L++ +YPT++ R S G +P S+HVR+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
Score = 50.4 bits (115), Expect = 4e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +1
Query: 355 IRPNLKIXTVXILLAGRHAGKRVVLVGILPSGLLLVTGPFCIQFVP 492
+R ++ T+ I+L GRH GKRVV + L SGLLLVTGP + VP
Sbjct: 140 LRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVP 185
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 63.3 bits (147), Expect = 5e-10
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Frame = +3
Query: 90 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 257
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 258 TVPLKRRKSFYPTQEKIR--ASSGGRPXSKHVRR 353
V L++ +YPT++ R S G +P S+HVR+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
Score = 50.4 bits (115), Expect = 4e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +1
Query: 355 IRPNLKIXTVXILLAGRHAGKRVVLVGILPSGLLLVTGPFCIQFVP 492
+R ++ T+ I+L GRH GKRVV + L SGLLLVTGP + VP
Sbjct: 140 LRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVP 185
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 63.3 bits (147), Expect = 5e-10
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Frame = +3
Query: 90 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 257
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 258 TVPLKRRKSFYPTQEKIR--ASSGGRPXSKHVRR 353
V L++ +YPT++ R S G +P S+HVR+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
Score = 50.4 bits (115), Expect = 4e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +1
Query: 355 IRPNLKIXTVXILLAGRHAGKRVVLVGILPSGLLLVTGPFCIQFVP 492
+R ++ T+ I+L GRH GKRVV + L SGLLLVTGP + VP
Sbjct: 140 LRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVP 185
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 63.3 bits (147), Expect = 5e-10
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Frame = +3
Query: 90 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 257
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 258 TVPLKRRKSFYPTQEKIR--ASSGGRPXSKHVRR 353
V L++ +YPT++ R S G +P S+HVR+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
Score = 50.4 bits (115), Expect = 4e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +1
Query: 355 IRPNLKIXTVXILLAGRHAGKRVVLVGILPSGLLLVTGPFCIQFVP 492
+R ++ T+ I+L GRH GKRVV + L SGLLLVTGP + VP
Sbjct: 140 LRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVP 185
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 63.3 bits (147), Expect = 5e-10
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Frame = +3
Query: 90 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 257
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 258 TVPLKRRKSFYPTQEKIR--ASSGGRPXSKHVRR 353
V L++ +YPT++ R S G +P S+HVR+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
Score = 50.4 bits (115), Expect = 4e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +1
Query: 355 IRPNLKIXTVXILLAGRHAGKRVVLVGILPSGLLLVTGPFCIQFVP 492
+R ++ T+ I+L GRH GKRVV + L SGLLLVTGP + VP
Sbjct: 140 LRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVP 185
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 63.3 bits (147), Expect = 5e-10
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Frame = +3
Query: 90 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 257
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 258 TVPLKRRKSFYPTQEKIR--ASSGGRPXSKHVRR 353
V L++ +YPT++ R S G +P S+HVR+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
Score = 50.4 bits (115), Expect = 4e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +1
Query: 355 IRPNLKIXTVXILLAGRHAGKRVVLVGILPSGLLLVTGPFCIQFVP 492
+R ++ T+ I+L GRH GKRVV + L SGLLLVTGP + VP
Sbjct: 140 LRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVP 185
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 63.3 bits (147), Expect = 5e-10
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Frame = +3
Query: 90 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 257
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 258 TVPLKRRKSFYPTQEKIR--ASSGGRPXSKHVRR 353
V L++ +YPT++ R S G +P S+HVR+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
Score = 50.4 bits (115), Expect = 4e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +1
Query: 355 IRPNLKIXTVXILLAGRHAGKRVVLVGILPSGLLLVTGPFCIQFVP 492
+R ++ T+ I+L GRH GKRVV + L SGLLLVTGP + VP
Sbjct: 140 LRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVP 185
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 63.3 bits (147), Expect = 5e-10
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Frame = +3
Query: 90 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 257
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 258 TVPLKRRKSFYPTQEKIR--ASSGGRPXSKHVRR 353
V L++ +YPT++ R S G +P S+HVR+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
Score = 40.7 bits (91), Expect = 0.003
Identities = 22/47 (46%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Frame = +1
Query: 355 IRPNLKIXTVXILLAGRHAGKR-VVLVGILPSGLLLVTGPFCIQFVP 492
+R ++ T+ I+L GR GK VV + L SGLLLVTGP + VP
Sbjct: 140 LRASITPGTILIILTGRRRGKNWVVFLKQLASGLLLVTGPLVLNRVP 186
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 63.3 bits (147), Expect = 5e-10
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Frame = +3
Query: 90 RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTR 257
RN L G+ R+S+S M+ +KA KY L V K +GG+KNGGTR
Sbjct: 46 RNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTR 105
Query: 258 TVPLKRRKSFYPTQEKIR--ASSGGRPXSKHVRR 353
V L++ +YPT++ R S G +P S+HVR+
Sbjct: 106 VVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRK 139
Score = 50.4 bits (115), Expect = 4e-06
Identities = 24/46 (52%), Positives = 31/46 (67%)
Frame = +1
Query: 355 IRPNLKIXTVXILLAGRHAGKRVVLVGILPSGLLLVTGPFCIQFVP 492
+R ++ T+ I+L GRH GKRVV + L SGLLLVTGP + VP
Sbjct: 140 LRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVLNRVP 185
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 54.0 bits (124), Expect = 3e-07
Identities = 29/79 (36%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +3
Query: 123 FSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQE 302
+S+ M+ K KY L V K +GG+KNGGTR V L++ +YPT++
Sbjct: 2 YSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED 59
Query: 303 KIR--ASSGGRPXSKHVRR 353
R S G +P S+HVR+
Sbjct: 60 VPRKLLSHGKKPFSQHVRK 78
Score = 47.2 bits (107), Expect = 3e-05
Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = +1
Query: 355 IRPNLKIXTVXILLAGRHAGKRVVLVGILPSGLLLVTGPF-CIQFV 489
+R ++ T+ I+L GRH GKRVV + L SGLLLVTGP I+F+
Sbjct: 79 LRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTGPLVSIEFL 124
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 53.2 bits (122), Expect = 5e-07
Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)
Frame = +3
Query: 114 VMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYP 293
+ S+ M+ K KY L V K +GG+KNGGTR V L++ +YP
Sbjct: 60 ICHVSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYP 117
Query: 294 TQEKIR--ASSGGRPXSKHVRR 353
T++ R S G +P S+HVR+
Sbjct: 118 TEDVPRKLLSHGKKPFSQHVRK 139
Score = 41.5 bits (93), Expect = 0.002
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +1
Query: 355 IRPNLKIXTVXILLAGRHAGKRVVLVGILPSGLLLVT 465
+R ++ T+ I+L GRH GKRVV + L SGLLLVT
Sbjct: 140 LRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVT 176
>AB066840-1|BAC01879.1| 121|Homo sapiens immunoglobulin heavy chain
VHDJ region protein.
Length = 121
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/45 (28%), Positives = 26/45 (57%), Gaps = 4/45 (8%)
Frame = -3
Query: 402 TSEENANSSYLQVGS----DSCVHACXMDGHQMRHGFSPEWGRRT 280
T++++ N++Y+++ S D+ V+ C DGH + WG+ T
Sbjct: 71 TADKSTNTAYMELSSLRSEDTAVYYCARDGHDSSGYYFDYWGQGT 115
>AJ579283-1|CAE45537.1| 121|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 121
Score = 30.3 bits (65), Expect = 4.3
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Frame = -3
Query: 399 SEENANSS-YLQVGS----DSCVHACXMDGHQMRHGFSPEWGRRT 280
S +N+N++ YLQ+ S D+ V+ C DG R+ + WG+ T
Sbjct: 71 SRDNSNNTLYLQMNSLRAEDTAVYYCAKDGQTGRYNWFDPWGQGT 115
>AF460746-1|AAM88117.1| 63|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 63
Score = 29.5 bits (63), Expect = 7.5
Identities = 13/43 (30%), Positives = 26/43 (60%), Gaps = 4/43 (9%)
Frame = -3
Query: 402 TSEENANSSYLQVGS----DSCVHACXMDGHQMRHGFSPEWGR 286
T++E+ +++Y+++ S D+ V+ C D H + GF WG+
Sbjct: 22 TADESTSTAYMELSSLRSEDTAVYYCARDSHHTQGGFD-YWGQ 63
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,587,867
Number of Sequences: 237096
Number of extensions: 1484077
Number of successful extensions: 3219
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3219
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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