Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328G01f
         (427 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase...    24   0.82 
AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.      23   1.9  
AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.     22   2.5  
DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.          21   4.4  
DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    21   5.8  

>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
           protein.
          Length = 1143

 Score = 23.8 bits (49), Expect = 0.82
 Identities = 9/30 (30%), Positives = 19/30 (63%)
 Frame = +3

Query: 162 VEDDQHRLQWEFYSKEINFTEGSGKLEKSD 251
           +  + HR++WE   KE+  T G+ +L +++
Sbjct: 83  LNSEAHRIRWESVQKEVTVT-GTYQLTETE 111


>AJ849455-1|CAH60991.1|  366|Apis mellifera twist protein protein.
          Length = 366

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 399 YQTHHHLMPLQFHDMLFQ 346
           YQ+HHH   L  H +L+Q
Sbjct: 70  YQSHHH---LHHHQVLYQ 84


>AB194707-1|BAD69622.1|  247|Apis mellifera heme oxygenase protein.
          Length = 247

 Score = 22.2 bits (45), Expect = 2.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +1

Query: 277 VYHIHLGLKSGCIYVELTR 333
           +YH+++GL SG I +   R
Sbjct: 126 IYHLYMGLLSGGIILRKKR 144


>DQ071552-1|AAY82248.1|  495|Apis mellifera anarchy 1 protein.
          Length = 495

 Score = 21.4 bits (43), Expect = 4.4
 Identities = 10/34 (29%), Positives = 19/34 (55%)
 Frame = +1

Query: 232 VSLKNQINYRKWSKMVYHIHLGLKSGCIYVELTR 333
           +SLKN++        ++ I+LG++ G    +L R
Sbjct: 448 LSLKNKVETTHSGTSLFRINLGIECGYEIKKLLR 481


>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 21.0 bits (42), Expect = 5.8
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +2

Query: 269 QRWCTTFT*ASSLDAFMW 322
           Q+W T F  A  L+ F W
Sbjct: 23  QKWGTQFGQAPLLERFFW 40


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,652
Number of Sequences: 438
Number of extensions: 1995
Number of successful extensions: 15
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10997463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)