Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328F06f
(521 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC107057-1|AAI07058.1| 341|Homo sapiens UBE2Q1 protein protein. 33 0.46
BC087836-1|AAH87836.1| 256|Homo sapiens UBE2Q1 protein protein. 33 0.46
BC070158-1|AAH70158.1| 294|Homo sapiens UBE2Q1 protein protein. 33 0.46
BC061583-1|AAH61583.1| 223|Homo sapiens UBE2Q1 protein protein. 33 0.46
BC000848-1|AAH00848.1| 230|Homo sapiens UBE2Q1 protein protein. 33 0.46
AY948200-1|AAY23342.1| 422|Homo sapiens galactosyl transferase-... 33 0.46
AY112698-1|AAM60814.1| 422|Homo sapiens ubiquitin-conjugating e... 33 0.46
AL592078-5|CAI16186.1| 422|Homo sapiens ubiquitin-conjugating e... 33 0.46
AK056388-1|BAB71173.1| 217|Homo sapiens protein ( Homo sapiens ... 33 0.46
BC017708-1|AAH17708.1| 375|Homo sapiens ubiquitin-conjugating e... 32 1.1
BC006827-1|AAH06827.1| 199|Homo sapiens UBE2Q2 protein protein. 32 1.1
>BC107057-1|AAI07058.1| 341|Homo sapiens UBE2Q1 protein protein.
Length = 341
Score = 33.5 bits (73), Expect = 0.46
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2
Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
ELR I S F+G Y +N S Y +K+ K D + LH D+++L
Sbjct: 178 ELRDIYRSQSFKGGNYAVELVNDSLYDWNVKLLKVDQDSALHNDLQIL 225
>BC087836-1|AAH87836.1| 256|Homo sapiens UBE2Q1 protein protein.
Length = 256
Score = 33.5 bits (73), Expect = 0.46
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2
Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
ELR I S F+G Y +N S Y +K+ K D + LH D+++L
Sbjct: 93 ELRDIYRSQSFKGGNYAVELVNDSLYDWNVKLLKVDQDSALHNDLQIL 140
>BC070158-1|AAH70158.1| 294|Homo sapiens UBE2Q1 protein protein.
Length = 294
Score = 33.5 bits (73), Expect = 0.46
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2
Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
ELR I S F+G Y +N S Y +K+ K D + LH D+++L
Sbjct: 131 ELRDIYRSQSFKGGNYAVELVNDSLYDWNVKLLKVDQDSALHNDLQIL 178
>BC061583-1|AAH61583.1| 223|Homo sapiens UBE2Q1 protein protein.
Length = 223
Score = 33.5 bits (73), Expect = 0.46
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2
Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
ELR I S F+G Y +N S Y +K+ K D + LH D+++L
Sbjct: 60 ELRDIYRSQSFKGGNYAVELVNDSLYDWNVKLLKVDQDSALHNDLQIL 107
>BC000848-1|AAH00848.1| 230|Homo sapiens UBE2Q1 protein protein.
Length = 230
Score = 33.5 bits (73), Expect = 0.46
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2
Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
ELR I S F+G Y +N S Y +K+ K D + LH D+++L
Sbjct: 67 ELRDIYRSQSFKGGNYAVELVNDSLYDWNVKLLKVDQDSALHNDLQIL 114
>AY948200-1|AAY23342.1| 422|Homo sapiens galactosyl
transferase-associated protein protein.
Length = 422
Score = 33.5 bits (73), Expect = 0.46
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2
Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
ELR I S F+G Y +N S Y +K+ K D + LH D+++L
Sbjct: 259 ELRDIYRSQSFKGGNYAVELVNDSLYDWNVKLLKVDQDSALHNDLQIL 306
>AY112698-1|AAM60814.1| 422|Homo sapiens ubiquitin-conjugating
enzyme E2Q protein.
Length = 422
Score = 33.5 bits (73), Expect = 0.46
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2
Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
ELR I S F+G Y +N S Y +K+ K D + LH D+++L
Sbjct: 259 ELRDIYRSQSFKGGNYAVELVNDSLYDWNVKLLKVDQDSALHNDLQIL 306
>AL592078-5|CAI16186.1| 422|Homo sapiens ubiquitin-conjugating
enzyme E2Q (putative) 1 protein.
Length = 422
Score = 33.5 bits (73), Expect = 0.46
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2
Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
ELR I S F+G Y +N S Y +K+ K D + LH D+++L
Sbjct: 259 ELRDIYRSQSFKGGNYAVELVNDSLYDWNVKLLKVDQDSALHNDLQIL 306
>AK056388-1|BAB71173.1| 217|Homo sapiens protein ( Homo sapiens
cDNA FLJ31826 fis, clone NT2RP6000086, highly similar to
Homo sapiens mRNA for NICE-5 protein. ).
Length = 217
Score = 33.5 bits (73), Expect = 0.46
Identities = 18/48 (37%), Positives = 26/48 (54%)
Frame = -2
Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
ELR I S F+G Y +N S Y +K+ K D + LH D+++L
Sbjct: 54 ELRDIYRSQSFKGGNYAVELVNDSLYDWNVKLLKVDQDSALHNDLQIL 101
>BC017708-1|AAH17708.1| 375|Homo sapiens ubiquitin-conjugating
enzyme E2Q (putative) 2 protein.
Length = 375
Score = 32.3 bits (70), Expect = 1.1
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
ELR I S ++ Y +N S Y +K+ K D + PLH D+++L
Sbjct: 212 ELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQIL 259
>BC006827-1|AAH06827.1| 199|Homo sapiens UBE2Q2 protein protein.
Length = 199
Score = 32.3 bits (70), Expect = 1.1
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = -2
Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
ELR I S ++ Y +N S Y +K+ K D + PLH D+++L
Sbjct: 97 ELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQIL 144
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 55,056,344
Number of Sequences: 237096
Number of extensions: 840888
Number of successful extensions: 1232
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1211
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1232
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4990119376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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