Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ovS328F06f
         (521 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024231-1|ABC86293.1|  397|Drosophila melanogaster LD28546p pro...    31   1.3  
AY089520-1|AAL90258.1|  217|Drosophila melanogaster GM13209p pro...    31   1.3  
AL009196-2|CAA15712.1|  394|Drosophila melanogaster EG:25E8.2 pr...    31   1.3  
AF537092-1|AAO85551.1|  384|Drosophila melanogaster ubiquitin co...    31   1.3  
AE014298-377|AAF45767.1|  397|Drosophila melanogaster CG2924-PC,...    31   1.3  
AE014298-376|AAF45768.2|  397|Drosophila melanogaster CG2924-PA,...    31   1.3  

>BT024231-1|ABC86293.1|  397|Drosophila melanogaster LD28546p
           protein.
          Length = 397

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
           ELR I  S  F+   Y    +N S Y   I++   D + PLH D+++L
Sbjct: 230 ELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKSVDPDSPLHSDLQML 277


>AY089520-1|AAL90258.1|  217|Drosophila melanogaster GM13209p
           protein.
          Length = 217

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
           ELR I  S  F+   Y    +N S Y   I++   D + PLH D+++L
Sbjct: 50  ELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKSVDPDSPLHSDLQML 97


>AL009196-2|CAA15712.1|  394|Drosophila melanogaster EG:25E8.2
           protein.
          Length = 394

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
           ELR I  S  F+   Y    +N S Y   I++   D + PLH D+++L
Sbjct: 230 ELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKSVDPDSPLHSDLQML 277


>AF537092-1|AAO85551.1|  384|Drosophila melanogaster ubiquitin
           conjugating enzyme E2 protein.
          Length = 384

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
           ELR I  S  F+   Y    +N S Y   I++   D + PLH D+++L
Sbjct: 217 ELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKSVDPDSPLHSDLQML 264


>AE014298-377|AAF45767.1|  397|Drosophila melanogaster CG2924-PC,
           isoform C protein.
          Length = 397

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
           ELR I  S  F+   Y    +N S Y   I++   D + PLH D+++L
Sbjct: 230 ELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKSVDPDSPLHSDLQML 277


>AE014298-376|AAF45768.2|  397|Drosophila melanogaster CG2924-PA,
           isoform A protein.
          Length = 397

 Score = 30.7 bits (66), Expect = 1.3
 Identities = 17/48 (35%), Positives = 25/48 (52%)
 Frame = -2

Query: 334 ELRRIEGSVEFRGRYYISHQLNLSTYLLRIKIYKHDYNKPLHLDIKLL 191
           ELR I  S  F+   Y    +N S Y   I++   D + PLH D+++L
Sbjct: 230 ELRDIYRSDAFKKNMYSIELVNESIYEWNIRLKSVDPDSPLHSDLQML 277


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,178,892
Number of Sequences: 53049
Number of extensions: 269129
Number of successful extensions: 428
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 427
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 428
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)