Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328F05f
(521 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
S63761-1|AAB27496.2| 197|Drosophila melanogaster EcR-A protein. 32 0.54
AY075461-1|AAL68274.1| 872|Drosophila melanogaster RE16656p pro... 32 0.54
AE013599-151|AAM68346.1| 849|Drosophila melanogaster CG1765-PE,... 32 0.54
AE013599-150|AAG22334.2| 849|Drosophila melanogaster CG1765-PD,... 32 0.54
AE013599-149|AAF57278.3| 849|Drosophila melanogaster CG1765-PA,... 32 0.54
BT015210-1|AAT94439.1| 462|Drosophila melanogaster RE57622p pro... 30 1.7
AE014298-2831|AAF48946.2| 462|Drosophila melanogaster CG8028-PA... 30 1.7
X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putat... 28 8.8
BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p pro... 28 8.8
AY008258-1|AAG16637.1| 2035|Drosophila melanogaster ecdysone rec... 28 8.8
AE014134-1613|AAF52754.2| 2047|Drosophila melanogaster CG13109-P... 28 8.8
>S63761-1|AAB27496.2| 197|Drosophila melanogaster EcR-A protein.
Length = 197
Score = 31.9 bits (69), Expect = 0.54
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -3
Query: 225 AATGSMGPANGALLLSPSRKHFLFICVEPGSTPRCPSGTPSMSPQ-KGSPASQPYTLN 55
A + S ANG L+L P+++ L + + STP P PS +P SP SQ ++ N
Sbjct: 118 APSTSAAAANGHLVLVPNKRPRLDVTEDWMSTP-SPGSVPSSAPPLSPSPGSQNHSYN 174
>AY075461-1|AAL68274.1| 872|Drosophila melanogaster RE16656p
protein.
Length = 872
Score = 31.9 bits (69), Expect = 0.54
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -3
Query: 225 AATGSMGPANGALLLSPSRKHFLFICVEPGSTPRCPSGTPSMSPQ-KGSPASQPYTLN 55
A + S ANG L+L P+++ L + + STP P PS +P SP SQ ++ N
Sbjct: 118 APSTSAAAANGHLVLVPNKRPRLDVTEDWMSTP-SPGSVPSSAPPLSPSPGSQNHSYN 174
>AE013599-151|AAM68346.1| 849|Drosophila melanogaster CG1765-PE,
isoform E protein.
Length = 849
Score = 31.9 bits (69), Expect = 0.54
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -3
Query: 225 AATGSMGPANGALLLSPSRKHFLFICVEPGSTPRCPSGTPSMSPQ-KGSPASQPYTLN 55
A + S ANG L+L P+++ L + + STP P PS +P SP SQ ++ N
Sbjct: 118 APSTSAAAANGHLVLVPNKRPRLDVTEDWMSTP-SPGSVPSSAPPLSPSPGSQNHSYN 174
>AE013599-150|AAG22334.2| 849|Drosophila melanogaster CG1765-PD,
isoform D protein.
Length = 849
Score = 31.9 bits (69), Expect = 0.54
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -3
Query: 225 AATGSMGPANGALLLSPSRKHFLFICVEPGSTPRCPSGTPSMSPQ-KGSPASQPYTLN 55
A + S ANG L+L P+++ L + + STP P PS +P SP SQ ++ N
Sbjct: 118 APSTSAAAANGHLVLVPNKRPRLDVTEDWMSTP-SPGSVPSSAPPLSPSPGSQNHSYN 174
>AE013599-149|AAF57278.3| 849|Drosophila melanogaster CG1765-PA,
isoform A protein.
Length = 849
Score = 31.9 bits (69), Expect = 0.54
Identities = 21/58 (36%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = -3
Query: 225 AATGSMGPANGALLLSPSRKHFLFICVEPGSTPRCPSGTPSMSPQ-KGSPASQPYTLN 55
A + S ANG L+L P+++ L + + STP P PS +P SP SQ ++ N
Sbjct: 118 APSTSAAAANGHLVLVPNKRPRLDVTEDWMSTP-SPGSVPSSAPPLSPSPGSQNHSYN 174
>BT015210-1|AAT94439.1| 462|Drosophila melanogaster RE57622p
protein.
Length = 462
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 177 PSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPASQPYT 61
P+ + L C PGST C P+ P+KGSP + ++
Sbjct: 394 PASRRSLDFCA-PGSTFHCLWSLPTTCPRKGSPLAMAFS 431
>AE014298-2831|AAF48946.2| 462|Drosophila melanogaster CG8028-PA
protein.
Length = 462
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = -3
Query: 177 PSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPASQPYT 61
P+ + L C PGST C P+ P+KGSP + ++
Sbjct: 394 PASRRSLDFCA-PGSTFHCLWSLPTTCPRKGSPLAMAFS 431
>X17551-1|CAA35586.1| 565|Drosophila melanogaster ORF1 for putative
RNA bindingprotein protein.
Length = 565
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 168 KHFLFICVEPGSTPRCPSGTPSMSPQKGSPASQPYTLN 55
K +C EP +T CP S +K S + +T N
Sbjct: 400 KSVCVVCSEPHTTANCPKNKDDKSVKKCSNCGEKHTAN 437
>BT014916-1|AAT47767.1| 409|Drosophila melanogaster RE14563p
protein.
Length = 409
Score = 27.9 bits (59), Expect = 8.8
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -3
Query: 168 KHFLFICVEPGSTPRCPSGTPSMSPQKGSPASQPYTLN 55
K +C EP +T CP S +K S + +T N
Sbjct: 244 KSVCVVCSEPHTTANCPKNKDDKSVKKCSNCGEKHTAN 281
>AY008258-1|AAG16637.1| 2035|Drosophila melanogaster ecdysone receptor
co-activatorTaiman protein.
Length = 2035
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -3
Query: 210 MGPANGALLLSPSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPASQPYTLNRN*TVAAV 31
+ P+ G + SR + P STPR PSG SP + + PY L+ + +
Sbjct: 867 LDPSGGVGAWTDSRPNSRASVATPVSTPRPPSG-HGFSPAVCASPATPYQLSSHSAASLP 925
Query: 30 SSRRNS 13
S + N+
Sbjct: 926 SPQSNA 931
>AE014134-1613|AAF52754.2| 2047|Drosophila melanogaster CG13109-PA
protein.
Length = 2047
Score = 27.9 bits (59), Expect = 8.8
Identities = 19/66 (28%), Positives = 30/66 (45%)
Frame = -3
Query: 210 MGPANGALLLSPSRKHFLFICVEPGSTPRCPSGTPSMSPQKGSPASQPYTLNRN*TVAAV 31
+ P+ G + SR + P STPR PSG SP + + PY L+ + +
Sbjct: 867 LDPSGGVGAWTDSRPNSRASVATPVSTPRPPSG-HGFSPAVCASPATPYQLSSHSAASLP 925
Query: 30 SSRRNS 13
S + N+
Sbjct: 926 SPQSNA 931
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,809,326
Number of Sequences: 53049
Number of extensions: 426316
Number of successful extensions: 1741
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1495
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1738
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1929233664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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