Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ovS328F01f
(521 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0662 + 30987187-30987277,30987825-30990214 130 5e-31
04_01_0103 + 1082077-1082167,1083037-1085477 130 9e-31
02_04_0017 + 18937774-18937864,18938505-18940945 130 9e-31
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 124 3e-29
03_05_0511 + 25056018-25059107 122 2e-28
02_04_0148 - 20198407-20201424 110 6e-25
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 110 8e-25
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 99 2e-21
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 89 2e-18
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 83 1e-16
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 81 7e-16
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 80 1e-15
04_04_0640 - 26891552-26891725,26891814-26892326,26892698-268936... 66 2e-11
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 62 3e-10
02_04_0462 + 23131433-23132836 60 1e-09
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 55 4e-08
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 54 7e-08
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 54 7e-08
03_01_0548 + 4099386-4099847,4100435-4101316 44 7e-05
03_01_0547 + 4093196-4093657,4094267-4095148 44 7e-05
03_01_0544 + 4082528-4082989,4083585-4084466 44 7e-05
03_01_0543 + 4076981-4077442,4078145-4079026 44 7e-05
05_07_0329 - 29308867-29308932,29309040-29309159,29309245-293093... 44 1e-04
04_04_1593 - 34661670-34661798,34661882-34661989,34662129-346623... 43 1e-04
01_05_0487 + 22641133-22642182,22642276-22642863,22642961-226430... 42 2e-04
12_02_0457 + 19239816-19241319,19241337-19241632,19241729-192418... 42 4e-04
05_07_0212 + 28434612-28435931,28436012-28436044,28436557-284366... 36 0.020
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 32 0.32
08_02_0577 + 18890801-18891600,18892033-18892911,18903566-189037... 29 1.7
11_01_0755 - 6343084-6345172,6345526-6346367 29 3.0
02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783 28 4.0
12_01_0491 - 3884764-3885114,3885143-3885403,3885493-3885711,388... 28 5.2
11_06_0715 + 26552962-26553510,26553578-26555746 28 5.2
02_02_0574 - 11701359-11701460,11701469-11701570,11701725-117019... 28 5.2
01_05_0489 + 22652479-22653718,22653882-22654063,22654172-226542... 28 5.2
01_05_0320 - 20874691-20875230,20879337-20879590,20880014-208810... 28 5.2
11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993 27 9.1
02_02_0565 + 11550071-11550909,11551603-11553133,11553205-11553537 27 9.1
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 130 bits (315), Expect = 5e-31
Identities = 64/123 (52%), Positives = 90/123 (73%), Gaps = 12/123 (9%)
Frame = +1
Query: 127 KKLLELQNNPSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQR 306
+++ + + NIRN+ +VAHVDHGK+TL DSL+++ GII+Q ++G +R DSR DE +R
Sbjct: 7 EEMRRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDSRSDEAER 66
Query: 307 GITMKSSSISLYHAMNQE------------EYLVNLIDSPGHIDFSSEVSTAVMLCDGAI 450
GIT+KS+ ISLY+ M+ E EYL+NLIDSPGH+DFSSEV+ A+ + DGA+
Sbjct: 67 GITIKSTGISLYYEMSDESLKSYKGDRDGNEYLINLIDSPGHVDFSSEVTAALRITDGAL 126
Query: 451 VVV 459
VVV
Sbjct: 127 VVV 129
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 130 bits (313), Expect = 9e-31
Identities = 62/123 (50%), Positives = 91/123 (73%), Gaps = 12/123 (9%)
Frame = +1
Query: 127 KKLLELQNNPSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQR 306
++L + + +NIRN+ ++AHVDHGK+TL DSL+++ GII+Q ++G +R D+R DE +R
Sbjct: 7 EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAER 66
Query: 307 GITMKSSSISLYHAMNQE------------EYLVNLIDSPGHIDFSSEVSTAVMLCDGAI 450
GIT+KS+ ISL++ M+ E EYL+NLIDSPGH+DFSSEV+ A+ + DGA+
Sbjct: 67 GITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALRITDGAL 126
Query: 451 VVV 459
VVV
Sbjct: 127 VVV 129
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 130 bits (313), Expect = 9e-31
Identities = 62/123 (50%), Positives = 91/123 (73%), Gaps = 12/123 (9%)
Frame = +1
Query: 127 KKLLELQNNPSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQR 306
++L + + +NIRN+ ++AHVDHGK+TL DSL+++ GII+Q ++G +R D+R DE +R
Sbjct: 7 EELRRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQEVAGDVRMTDTRADEAER 66
Query: 307 GITMKSSSISLYHAMNQE------------EYLVNLIDSPGHIDFSSEVSTAVMLCDGAI 450
GIT+KS+ ISL++ M+ E EYL+NLIDSPGH+DFSSEV+ A+ + DGA+
Sbjct: 67 GITIKSTGISLFYEMSDESLKLYKGERDGNEYLINLIDSPGHVDFSSEVTAALRITDGAL 126
Query: 451 VVV 459
VVV
Sbjct: 127 VVV 129
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 124 bits (300), Expect = 3e-29
Identities = 62/124 (50%), Positives = 87/124 (70%), Gaps = 12/124 (9%)
Frame = +1
Query: 124 SKKLLELQNNPSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQ 303
+++L + NIRN+ ++AHVDHGK+TL DSL+++ GII+Q ++G +R D+R DE +
Sbjct: 6 AEELRASMDKKDNIRNMSVIAHVDHGKSTLTDSLVAAAGIIAQDVAGDVRMTDTRADEAE 65
Query: 304 RGITMKSSSISLYHAMNQ------------EEYLVNLIDSPGHIDFSSEVSTAVMLCDGA 447
RGIT+KS+ ISLY+ M YL+NLIDSPGHIDFSSEV+ A+ + DGA
Sbjct: 66 RGITIKSTGISLYYEMTDAALRSFEGKRDGNSYLINLIDSPGHIDFSSEVTAALRITDGA 125
Query: 448 IVVV 459
+VVV
Sbjct: 126 LVVV 129
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 122 bits (293), Expect = 2e-28
Identities = 60/119 (50%), Positives = 86/119 (72%), Gaps = 2/119 (1%)
Frame = +1
Query: 151 NPSNIRNICIVAHVDHGKTTLADSLISS--NGIISQRMSGKLRYMDSRPDEQQRGITMKS 324
+P +RN CI+AHVDHGKTTLAD L++S +G++ R++G+LR+MD +EQ+R ITMKS
Sbjct: 6 DPRRVRNTCILAHVDHGKTTLADHLVASCGDGLVHPRLAGRLRFMDYLDEEQRRAITMKS 65
Query: 325 SSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVVCMNSSTNDIHIIRH 501
+++ L+H ++ VNLIDSPGHIDF SEVS+A L D A+++V + +HI H
Sbjct: 66 AAVVLHHGGHR----VNLIDSPGHIDFCSEVSSAARLSDSALILV---DAVEGVHIQTH 117
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 110 bits (265), Expect = 6e-25
Identities = 58/106 (54%), Positives = 75/106 (70%), Gaps = 4/106 (3%)
Frame = +1
Query: 154 PSNIRNICIVAHVDHGKTTLADSLISSNGI---ISQRMSGKLRYMDSRPDEQQRGITMKS 324
P +RN CI+AHVDHGKT+LAD LI++ G +S+RM+G R MD +EQ+R ITMKS
Sbjct: 13 PRRVRNTCILAHVDHGKTSLADHLIAAYGSERRVSERMAGSARVMDHLEEEQRRAITMKS 72
Query: 325 SSISLYH-AMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
+SI+L + + V+LIDSPGHIDF SEVS A L D A+V+V
Sbjct: 73 ASIALRRGGEDGGGHRVHLIDSPGHIDFCSEVSAAARLADSALVLV 118
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 110 bits (264), Expect = 8e-25
Identities = 52/107 (48%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
Frame = +1
Query: 142 LQNNP-SNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITM 318
LQ P SNIRN I+AH+DHGK+TLAD L+ G + +R K +++D+ E++RGIT+
Sbjct: 69 LQKVPVSNIRNFSIIAHIDHGKSTLADKLLELTGTVQKREM-KQQFLDNMDLERERGITI 127
Query: 319 KSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
K + + + MN E Y +NLID+PGH+DFS EVS ++ C+GA++VV
Sbjct: 128 KLQAARMRYIMNDEPYCLNLIDTPGHVDFSYEVSRSLAACEGALLVV 174
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 99.1 bits (236), Expect = 2e-21
Identities = 51/113 (45%), Positives = 75/113 (66%), Gaps = 11/113 (9%)
Frame = +1
Query: 154 PSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSSI 333
P +RN I+AHVDHGK+TLAD L+ G I ++ G+ +Y+D E++RGIT+K+ +
Sbjct: 54 PERVRNFSIIAHVDHGKSTLADRLLELTGTI-KKGHGQPQYLDKLQVERERGITVKAQTA 112
Query: 334 SLY--HAMNQ---------EEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
+++ HA NQ YL+NLID+PGH+DFS EVS ++ C GA++VV
Sbjct: 113 TMFYRHANNQLPASDQPDAPSYLLNLIDTPGHVDFSYEVSRSLAACQGALLVV 165
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 89.0 bits (211), Expect = 2e-18
Identities = 44/113 (38%), Positives = 73/113 (64%), Gaps = 4/113 (3%)
Frame = +1
Query: 133 LLELQNNPSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMS-GK--LRYMDSRPDEQQ 303
LL L NP+ +RN+ +V H+ HGKT D L+ + S G+ +R+ D+R DEQ+
Sbjct: 138 LLGLAANPALVRNVALVGHLQHGKTVFMDMLVEQTHEVDTFDSEGERHVRFTDTRVDEQE 197
Query: 304 RGITMKSSSISLY-HAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
R +++K+ +SL N + YL N++D+PGH++FS E++ A+ + DGA++VV
Sbjct: 198 RRVSIKAVPMSLVLEGGNGKSYLCNIMDTPGHVNFSDEMTAALRIADGAVLVV 250
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 83.4 bits (197), Expect = 1e-16
Identities = 41/100 (41%), Positives = 62/100 (62%)
Frame = +1
Query: 160 NIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSSISL 339
++RNI IVAHVDHGKTTL DS++ + + R MDS E++RGIT+ S + S+
Sbjct: 118 DVRNIAIVAHVDHGKTTLVDSMLRQAKVFRDNQVVQERIMDSNDLERERGITILSKNTSI 177
Query: 340 YHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
+ + +N+ID+PGH DF EV + + +G ++VV
Sbjct: 178 TYKGTK----INIIDTPGHSDFGGEVERVLNMVEGVLLVV 213
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 80.6 bits (190), Expect = 7e-16
Identities = 44/103 (42%), Positives = 62/103 (60%)
Frame = +1
Query: 151 NPSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSS 330
+PS IRN+ ++AHVDHGKTTL D L+ G R MDS E++RGIT+ S
Sbjct: 60 DPSRIRNVAVIAHVDHGKTTLMDRLLRQCGADIPHE----RAMDSISLERERGITIASKV 115
Query: 331 ISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
S+ N+ +N++D+PGH DF EV V + +GA++VV
Sbjct: 116 TSVSWKENE----LNMVDTPGHADFGGEVERVVGMVEGAVLVV 154
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 79.8 bits (188), Expect = 1e-15
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Frame = +1
Query: 109 MRLVDSKKLLELQNNPSNIRNICIVAHVDHGKTTLADSLISSNGIISQ-----RMSGKLR 273
+R D K++ + + +RNI I AH+D GKTTL + ++ G I + G
Sbjct: 50 LRARDEKEVARWRESMDRMRNIGISAHIDSGKTTLTERVLYYTGRIHEIHEVRGRDGVGA 109
Query: 274 YMDSRPDEQQRGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIV 453
MDS E+++GIT++S++ Y N Y VN+ID+PGH+DF+ EV A+ + DGAI+
Sbjct: 110 KMDSMDLEREKGITIQSAAT--YCTWNG--YQVNIIDTPGHVDFTIEVERALRVLDGAIL 165
Query: 454 VVC 462
V+C
Sbjct: 166 VLC 168
>04_04_0640 -
26891552-26891725,26891814-26892326,26892698-26893644,
26893778-26894114,26894413-26894462,26895020-26895248
Length = 749
Score = 65.7 bits (153), Expect = 2e-11
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Frame = +1
Query: 178 IVAHVDHGKTTLADSLISSNGI---ISQRMSGKLRYMDSRPDEQQRGITMKSSSISLYHA 348
I+AH+D GKTT + ++ G I + G + MD EQ+RGIT+ S + +
Sbjct: 109 IMAHIDAGKTTTTERVLYYTGRNYKIGEFQEGTVT-MDWMEQEQERGITITSPPTTAFW- 166
Query: 349 MNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVVC 462
++ +N+ID+PGH+DF+ EV A+ + DGAI+ +C
Sbjct: 167 ---NKHRINIIDTPGHVDFTLEVERALRVLDGAIMSIC 201
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 62.1 bits (144), Expect = 3e-10
Identities = 37/115 (32%), Positives = 63/115 (54%), Gaps = 3/115 (2%)
Frame = +1
Query: 124 SKKLLELQNNPSNIRNICIVAHVDHGKTTLADSLISSNGIISQRM---SGKLRYMDSRPD 294
+++L + N +NIRN+ ++A HGKT + DSL+++ GI SQ + + + P+
Sbjct: 210 AEELHSIMCNKNNIRNVLVIADAGHGKTAILDSLVATAGITSQEVTESNSLISLYYEMPE 269
Query: 295 EQQRGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
+ R K + +L+NLIDSP + S++V A+ + DGA+VVV
Sbjct: 270 DSLRSYKDKRAG---------NGHLINLIDSPVCCNLSNDVQPALCIMDGALVVV 315
>02_04_0462 + 23131433-23132836
Length = 467
Score = 59.7 bits (138), Expect = 1e-09
Identities = 33/97 (34%), Positives = 50/97 (51%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSSISLYHA 348
NI + HVDHGKTTL +L + K +D+ P+E+ RGIT+ ++++ +
Sbjct: 72 NIGTIGHVDHGKTTLTAALTMVLASVGGSAPKKYDEIDAAPEERARGITINTATVE--YE 129
Query: 349 MNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
Y +D PGH D+ + T DGAI+VV
Sbjct: 130 TETRHYA--HVDCPGHADYVKNMITGAAQMDGAILVV 164
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 54.8 bits (126), Expect = 4e-08
Identities = 29/97 (29%), Positives = 47/97 (48%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSSISLYHA 348
N+ + HVDHGKTTL ++ + + +D P+E+ RGIT+ ++ + A
Sbjct: 69 NVGTIGHVDHGKTTLTAAITKVLAEAGKAKAVAFDEIDKAPEEKARGITIATAHVEYETA 128
Query: 349 MNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
+ +D PGH D+ + T DG I+VV
Sbjct: 129 KRHYAH----VDCPGHADYVKNMITGAAQMDGGILVV 161
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 54.0 bits (124), Expect = 7e-08
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 15/112 (13%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIIS------------QRMSGKLRY---MDSRPDEQQ 303
N+ IV HVD GK+TL+ L+ G IS ++ G Y MD +E++
Sbjct: 249 NLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERE 308
Query: 304 RGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
RG+TM ++++ + + ++Y V L+DSPGH DF + + D AI+VV
Sbjct: 309 RGVTM---TVAVAY-LETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVV 356
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 54.0 bits (124), Expect = 7e-08
Identities = 38/112 (33%), Positives = 60/112 (53%), Gaps = 15/112 (13%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIIS------------QRMSGKLRY---MDSRPDEQQ 303
N+ IV HVD GK+TL+ L+ G IS ++ G Y MD +E++
Sbjct: 249 NLAIVGHVDSGKSTLSGRLLHLLGRISKKDMHKNEKEAKEKGKGSFAYAWAMDESSEERE 308
Query: 304 RGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
RG+TM ++++ + + ++Y V L+DSPGH DF + + D AI+VV
Sbjct: 309 RGVTM---TVAVAY-LETKKYRVVLLDSPGHKDFVPNMISGATQADAAILVV 356
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 44.0 bits (99), Expect = 7e-05
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRM------------SGKLRY---MDSRPDEQQ 303
NI ++ HVD GK+T LI G I +R+ +Y +D E++
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Query: 304 RGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
RGIT+ I+L+ +Y +ID+PGH DF + T D A++++
Sbjct: 69 RGITI---DIALW-KFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 44.0 bits (99), Expect = 7e-05
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRM------------SGKLRY---MDSRPDEQQ 303
NI ++ HVD GK+T LI G I +R+ +Y +D E++
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Query: 304 RGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
RGIT+ I+L+ +Y +ID+PGH DF + T D A++++
Sbjct: 69 RGITI---DIALW-KFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 44.0 bits (99), Expect = 7e-05
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRM------------SGKLRY---MDSRPDEQQ 303
NI ++ HVD GK+T LI G I +R+ +Y +D E++
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Query: 304 RGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
RGIT+ I+L+ +Y +ID+PGH DF + T D A++++
Sbjct: 69 RGITI---DIALW-KFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 44.0 bits (99), Expect = 7e-05
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 15/112 (13%)
Frame = +1
Query: 169 NICIVAHVDHGKTTLADSLISSNGIISQRM------------SGKLRY---MDSRPDEQQ 303
NI ++ HVD GK+T LI G I +R+ +Y +D E++
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKLGGIDKRVIERFEKEAAEMNKRSFKYAWVLDKLKAERE 68
Query: 304 RGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
RGIT+ I+L+ +Y +ID+PGH DF + T D A++++
Sbjct: 69 RGITI---DIALW-KFETTKYYCTVIDAPGHRDFIKNMITGTSQADCAVLII 116
>05_07_0329 -
29308867-29308932,29309040-29309159,29309245-29309364,
29309566-29310123,29310199-29310258,29310839-29310904,
29310993-29311103,29311167-29311257,29311349-29311449,
29311534-29311641,29311737-29314205
Length = 1289
Score = 43.6 bits (98), Expect = 1e-04
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Frame = +1
Query: 151 NPSNIRN--ICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKS 324
N S++R+ CI+ HVD GKT L D + +N + + +G + I ++
Sbjct: 693 NGSDLRSPICCILGHVDTGKTKLLDCIRRTN--VQEGEAGGITQQIGATYFPTENIRERT 750
Query: 325 SSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
+ + LV ID+PGH FS+ S LCD AI+VV
Sbjct: 751 KELKADATLKVPGLLV--IDTPGHESFSNLRSRGSSLCDIAILVV 793
>04_04_1593 -
34661670-34661798,34661882-34661989,34662129-34662368,
34662614-34662782,34662872-34663362,34663681-34663991,
34664396-34664473,34665034-34665228,34665363-34665524,
34665759-34665840
Length = 654
Score = 43.2 bits (97), Expect = 1e-04
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +1
Query: 277 MDSRPDEQQRGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVV 456
MD DE++RGITM + ++ + N Y V L+DSPGH DF + + D AI+V
Sbjct: 287 MDESADERERGITM-TVGVAYFDTKN---YHVVLLDSPGHKDFVPNMISGATQSDAAILV 342
Query: 457 V 459
+
Sbjct: 343 I 343
>01_05_0487 +
22641133-22642182,22642276-22642863,22642961-22643068,
22643582-22643692,22643784-22643849,22644858-22644917,
22644990-22645119,22645159-22645547,22645783-22645902,
22645957-22646022,22646190-22646255
Length = 917
Score = 42.3 bits (95), Expect = 2e-04
Identities = 30/95 (31%), Positives = 46/95 (48%)
Frame = +1
Query: 175 CIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSSISLYHAMN 354
CI+ HVD GKT L D + +N + +G + I ++ + A++
Sbjct: 426 CILGHVDTGKTKLLDCIRCTN--VQGGEAGGITQQIGATFFPIENIRERTKELKAGAALH 483
Query: 355 QEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
+LV ID+PGH FS+ + LCD AI+VV
Sbjct: 484 VPGFLV--IDTPGHQSFSNLRTRGSSLCDIAILVV 516
>12_02_0457 +
19239816-19241319,19241337-19241632,19241729-19241829,
19241939-19242029,19242158-19242268,19242360-19242425,
19242457-19242462
Length = 724
Score = 41.5 bits (93), Expect = 4e-04
Identities = 32/95 (33%), Positives = 45/95 (47%)
Frame = +1
Query: 175 CIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSSISLYHAMN 354
CI+ HVD GKT L D + +N ++ D+ QQ G T A
Sbjct: 450 CILGHVDAGKTKLLDCIRHTN----------VQKGDAGGITQQIGATYVPVEYVKERAKP 499
Query: 355 QEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
+ + +ID+PGH FS+ S + LCD A+VVV
Sbjct: 500 HKVPGLLVIDTPGHESFSNMRSRGMSLCDIAVVVV 534
>05_07_0212 +
28434612-28435931,28436012-28436044,28436557-28436670,
28436767-28437102,28437221-28437283,28437364-28437519,
28437650-28437715,28439074-28439310,28439403-28439678,
28440060-28440248,28440459-28440620
Length = 983
Score = 35.9 bits (79), Expect = 0.020
Identities = 31/118 (26%), Positives = 53/118 (44%)
Frame = +1
Query: 106 KMRLVDSKKLLELQNNPSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDS 285
K +D + L +L++ P + I+ HVDHGKTTL D + S + S+ +G
Sbjct: 411 KKEFLDEEDLDKLEDRPPIVT---IMGHVDHGKTTLLDYIRKSKVVASE--AG------- 458
Query: 286 RPDEQQRGITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
GIT + + ++ + +D+PGH F + + + D I+VV
Sbjct: 459 -------GITQGIGAYQVIVQVDGNPHACVFLDTPGHEAFGAMRARGARVTDICIIVV 509
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 31.9 bits (69), Expect = 0.32
Identities = 24/96 (25%), Positives = 43/96 (44%)
Frame = +1
Query: 172 ICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSSISLYHAM 351
+ I+ HVDHGKT+L DSL + ++ G +++ + E G +
Sbjct: 200 VTIMGHVDHGKTSLLDSL-RQTSVAAKEAGGITQHIGAFVVEMPSGAS------------ 246
Query: 352 NQEEYLVNLIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
+ +D+PGH FS+ + + D ++VV
Sbjct: 247 ------ITFLDTPGHAAFSAMRARGAAVTDIVVLVV 276
>08_02_0577 +
18890801-18891600,18892033-18892911,18903566-18903707,
18903726-18904355
Length = 816
Score = 29.5 bits (63), Expect = 1.7
Identities = 20/64 (31%), Positives = 28/64 (43%)
Frame = +1
Query: 133 LLELQNNPSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDSRPDEQQRGI 312
L L+ +P +R I IV GKTTLA ++ S R+ R R E+ G
Sbjct: 172 LAMLEESPEELRVIAIVGFGGSGKTTLAKAVFRSTDDDRIRVFRSCRAWVDRAKEKNAGE 231
Query: 313 TMKS 324
+S
Sbjct: 232 IFRS 235
>11_01_0755 - 6343084-6345172,6345526-6346367
Length = 976
Score = 28.7 bits (61), Expect = 3.0
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 106 KMRLVDSKKLLELQNNPSNIRNICIVAHVDHGKTTLADSLISSNGIISQRMSGKLRYMDS 285
+ L+D L +++ P +R I IV GKTTLA ++ I Q G+ + S
Sbjct: 169 RQELLDLLLLEDVEGRPERMRVISIVGFGGSGKTTLARAVYDCPDIAGQ-FDGRAWVVAS 227
Query: 286 RPDEQQRGI 312
+ + G+
Sbjct: 228 KHRDDTMGL 236
>02_05_0143 + 26251401-26253734,26254658-26254810,26254951-26256783
Length = 1439
Score = 28.3 bits (60), Expect = 4.0
Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +1
Query: 112 RLVDSKKLLELQNNPSNIRNICIVAHV-DHGKTTLADSLISS 234
+L + +L+NN + I C+++H GKT LA + + S
Sbjct: 896 KLAGGTSIEQLRNNANTIEGGCVISHAPGTGKTRLAITFVQS 937
>12_01_0491 -
3884764-3885114,3885143-3885403,3885493-3885711,
3885792-3886019,3886378-3886480,3886703-3886815,
3887262-3887323,3887915-3888104
Length = 508
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +1
Query: 370 VNLIDSPGHIDFSSEVSTAVMLCDGAIVVVCMNSSTNDIHIIRHI 504
V+ +D PGH + + + DGA++++ N S H+
Sbjct: 150 VSFVDCPGHDILMATMLNGAAIMDGALLLIAANESCPQPQTSEHL 194
>11_06_0715 + 26552962-26553510,26553578-26555746
Length = 905
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/45 (31%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 64 SIIRVKFICRIKSIKMRLVDSKKLLELQNNPS--NIRNICIVAHV 192
S+ RV F+C + + + ++ EL NNPS ++RNI ++++
Sbjct: 362 SVGRVLFVCEKTEEEFKRIHNQLDWELVNNPSLEHVRNILYLSYI 406
>02_02_0574 - 11701359-11701460,11701469-11701570,11701725-11701922,
11702090-11704052,11705312-11706126
Length = 1059
Score = 27.9 bits (59), Expect = 5.2
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +1
Query: 361 EYLVNLIDSPGHIDFSSEVSTAVMLCDGAIV-VVCMNSSTNDIHIIRH 501
E+L +L D ID V D AI + MNS+ +H+IRH
Sbjct: 859 EHLSSLKDVTARIDCRDSSIFEVQNADAAIRRIAYMNSNQPKVHVIRH 906
>01_05_0489 +
22652479-22653718,22653882-22654063,22654172-22654279,
22654364-22654467,22654570-22654657,22654760-22654870,
22654955-22655020,22656740-22656799,22656869-22657411,
22657646-22657765,22657845-22657964,22659083-22659136,
22659236-22659331,22660580-22660681
Length = 997
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +1
Query: 376 LIDSPGHIDFSSEVSTAVMLCDGAIVVV 459
LID+PGH F + LCD AI+VV
Sbjct: 417 LIDTPGHETFRNFRCIGSRLCDIAILVV 444
>01_05_0320 - 20874691-20875230,20879337-20879590,20880014-20881087,
20881259-20881511,20881548-20882369
Length = 980
Score = 27.9 bits (59), Expect = 5.2
Identities = 23/97 (23%), Positives = 45/97 (46%)
Frame = +1
Query: 214 ADSLISSNGIISQRMSGKLRYMDSRPDEQQRGITMKSSSISLYHAMNQEEYLVNLIDSPG 393
AD + +++G G + + + R TM++ +L A + E+L L+
Sbjct: 839 ADEIKATSGYAFTLGGGAVSWKSCKQTILTRS-TMEAELTALDTATVEAEWLRELLMDLP 897
Query: 394 HIDFSSEVSTAVMLCDGAIVVVCMNSSTNDIHIIRHI 504
++ V +M CD V++ +NSS +++ RHI
Sbjct: 898 VVE--KPVPAILMNCDNQTVIIKVNSSKDNMKSSRHI 932
>11_06_0763 - 27101764-27104017,27104523-27105055,27106403-27106993
Length = 1125
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +1
Query: 109 MRLVDSKKLLELQNNPSN---IRNICIVAHVDHGKTTLADSLISSNGIISQR 255
+++ D +K +E P ++ ICI+ GKTTLA L S + Q+
Sbjct: 265 VQVEDKRKRVEEATKPCEFHEVKTICILGLPGAGKTTLAKLLYSHHSTTEQQ 316
>02_02_0565 + 11550071-11550909,11551603-11553133,11553205-11553537
Length = 900
Score = 27.1 bits (57), Expect = 9.1
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 2/98 (2%)
Frame = +1
Query: 136 LELQNNPSNIRNICIVAHVDHGKTTLADSLISSNGIISQR--MSGKLRYMDSRPDEQQRG 309
L+ + SN++ IV GKTTLA + + QR M + D+ D Q
Sbjct: 174 LKAVDESSNLKVFSIVGFGGLGKTTLAMEVCRKLESVFQRQAMVSVSQAFDASKDLQ--- 230
Query: 310 ITMKSSSISLYHAMNQEEYLVNLIDSPGHIDFSSEVST 423
+ +K + + E +N S G ID S +VST
Sbjct: 231 VLLKRIILQIIKPKKSNENSINEEQSTGDID-SMDVST 267
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,472,630
Number of Sequences: 37544
Number of extensions: 269800
Number of successful extensions: 835
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 791
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 804
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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